Ipod012548.1
Basic Information
- Insect
- Iphiclides podalirius
- Gene Symbol
- lz
- Assembly
- GCA_933534255.1
- Location
- OW152827.1:8911650-8928781[+]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-18 7.1e-15 55.0 0.0 88 129 7 48 5 48 0.95
Sequence Information
- Coding Sequence
- ATGGCACCGCTCCTGTGGGGGAAAACAGACGCAGGAAAATCGTTCACACTCACCATTATGTTGGCGACGTCGCCCCCACAAGTGGCGACCTACCAGAAGGCGATCAAGGTGACAGTGGATGGACCGCGAGAACCACGCTCTAAGACGCGTCACCACGGCTTCCATCCCTTCCACTTCGGGCCGAGGTTCGCGCCAGATCCTCTCATGGGTTCCCTGCCTTTCAAGTTGTCTGGTATAGCACACCAATTGGCTGGCTTGCCAGGTGGTGAATGGGGGGCGCTTGCGCGCCATTACCCTCCCCCCATTCTGCCATCGCATGCGCACTTTACACCGCACGTGCTCCCGCCCGCCCATGCGCAGCATCCGCACGTTCCTCCACCGCCCCACGAAACAGATGTTACATCGGAGACACCGACTACGATGAACGCGCACAGTACAACGAGTCCCATAAACTCACGCCCTAGCTCGCCCCAAGACGACGATATATCGGTTACCGCCTCCAGCAGTCCACCTCCGGACGAGCGTCCCGGGGCGTTCACATCAGTGGCTCGGACGAGGAAACCATTGCAACCTTTGCCGGCCCCGTCAAGTCTCTTCCACAGCGCGCTAGCGGCCCAGTTATTCTTAAACTCCCCTCTCCTCCCCACCCCCCCGGCGTGGATCTACTCACAGCTGTATGGGGGATACGACTGGTGGCTGAGACCACAGGCGCCACGAGACGACTCCAATTCCAGTCCCGACCGGGAGGATGAGGGCGGATCCACGGCATCGGGTATTGCGAAAAAAAGACCAGCCTCCCCGGAGTGGGCAGACCAGGGTGTCAGGACTCGCAGCAAGTCATTGATAACCCCGGAAAGACGGCCCATAGACGTGTGGCGTCCGTACTAA
- Protein Sequence
- MAPLLWGKTDAGKSFTLTIMLATSPPQVATYQKAIKVTVDGPREPRSKTRHHGFHPFHFGPRFAPDPLMGSLPFKLSGIAHQLAGLPGGEWGALARHYPPPILPSHAHFTPHVLPPAHAQHPHVPPPPHETDVTSETPTTMNAHSTTSPINSRPSSPQDDDISVTASSSPPPDERPGAFTSVARTRKPLQPLPAPSSLFHSALAAQLFLNSPLLPTPPAWIYSQLYGGYDWWLRPQAPRDDSNSSPDREDEGGSTASGIAKKRPASPEWADQGVRTRSKSLITPERRPIDVWRPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01148612; iTF_01386500; iTF_01388245; iTF_00194957; iTF_01141429; iTF_00957739; iTF_01494097; iTF_01141430; iTF_01281998; iTF_01220431; iTF_01082213; iTF_01387398; iTF_00467241; iTF_00345592; iTF_01173051; iTF_00844093; iTF_00025056; iTF_00703713;
- 90% Identity
- iTF_00284304;
- 80% Identity
- -