Imas004767.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- stc
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000033.1:2757586-2780604[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.6 2.8e+04 -3.8 1.6 15 19 121 125 120 125 0.81 2 14 1.4 2.5e+04 -3.6 2.0 2 10 153 161 153 161 0.88 3 14 0.0026 44 5.1 19.0 4 19 169 184 167 184 0.93 4 14 2e-08 0.00035 21.4 11.7 1 19 220 238 220 238 0.98 5 14 1.3 2.2e+04 -3.5 2.4 7 11 242 246 242 247 0.89 6 14 0.00039 6.7 7.7 15.8 1 18 279 296 279 297 0.97 7 14 3.1e-05 0.54 11.3 13.3 4 19 346 361 339 361 0.89 8 14 0.00035 6 7.9 7.1 1 11 401 411 401 412 0.95 9 14 0.0086 1.5e+02 3.4 1.3 4 10 416 422 415 422 0.93 10 14 8.8e-06 0.15 13.0 15.6 1 18 428 445 428 446 0.98 11 14 0.073 1.3e+03 0.5 18.4 1 18 485 501 485 502 0.81 12 14 0.97 1.7e+04 -3.1 1.2 8 13 507 512 506 513 0.79 13 14 1.5e-08 0.00026 21.9 11.0 1 16 538 553 538 558 0.92 14 14 0.092 1.6e+03 0.2 10.4 1 12 568 578 568 593 0.87
Sequence Information
- Coding Sequence
- ATGGAGCGCAACGCAGCCGAAGATGAGCAGTATGCCAACAGCTACCTCACGTACCGGGAGGAGAGACAGGACGGCCGCCGGCCAGTCACTAGCGAGAAGCTGCAACTTGTGCCCGCGAGCCCAACACGCCAGAAGTCTACCTACAAGCCAAGATCACCGGAAAGAGCGGAGAACACGGAGCTGACGCAGCGCGAGCGACTGAGCGAGCAGCTGGACCGCGGCGTGCTAGAGTGCCTGGTGTGCTGTGAGCGCGTCAAGCAGTCTGACGCTGTGTGGTCGTGCGGCAACTGCTACCATGTGCTGCATCTTCGCTGCATCCGCAAGTGGGCTATGAGCAGTCTTGTCGAGGGCAAGTGGCGGTGCCCGGCGTGCCAGAACACGAGCGACGAGGTGCCGACGGAGTACCTGTGCTTCTGCGGCGCGATGCGCGCGCCCGAGTGGGTGCGCGGCGCGGCGGGCGCGCACGGCTGCGGCGAGCGCTGCCGGCGCGCGCGCGCCTGCCCGCACCCCTGCCCGTTGCCGTGCCACCCGGGGCCCTGCCCGCTCTGCCAGGCCACGCTCAACAAGAAATGCGGCTGCGGTGCGGAGACTCGTTCGGTGGTGTGCAGCAGTAAGTTGGAGCAGGTGTGCGGGCGCTCGTGCGGACGCAAGTTGCCGTGCGGCGAGCACTACTGCACGCTCTCGTGCCACGAGGGCGACTGTGAGCCGTGCAAGGAGACCCTGGAGCAAGTGTGCCACTGCCCGGCGGCGAGGTCGCGCGTGGTGGAGTGCAGCGCGGCGACGGGCGGCGAGCGCTCGTGGGCGTGCGGCGAGGCGTGCGGCCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCCTGCCGCCCGTGCCACCTGCTGCCCGACGCGGTGCTCACGTGCCCCTGCGGCAAGATCAAGTTGAGCGAGAAGGAGAAACGCAACACGTGCACGGACCCCATCCCGCTGTGCGGCAACATCTGTGCCAAGCCGCTGACGTGCGGTCCGCCCAACGACCCGCACTTCTGCAAGCTCGAATGCCACGACGGCGCGTGCCCGCCGTGCCCCGACAAGACGGTAATGAACTGCCGCTGCGCGCACACGAGCCGCGACGTGGACTGCGTCGACGTGCCGCAGATGATCGACAACATCTTCTGCACCAAGAAGTGCAATAAGAAACTGTCGTGCGGCCGGCACCGATGCCGCGAGCTGTGCTGCGCCCTGGAGAGCCACCGCTGCCCTCAGGTGTGCGGGCGCACACTCTCCTGCGGCCTGCATCGCTGCGACAACTTCTGCCACACCGGACACTGCCCGGGCTGCGGACGTCTCGGGTTCTCGGAGCTGCGCTGCGAGTGCGGTGCGTCGGTGCTGCTGCCGCCGGTGGCGTGCGGCGCGCGGCCGCCGGCCTGCGCCGCGCTGTGCGCGCGCGCGCGCGCCTGCGGCCACCCGCCGCACCACGCGTGCCACCCAGGCGAGTGCCCGCCGTGCGTCGTGCTCACCGCCAAGCGCTGCCACGGCGGACACGAGGAAAGGAAGACGATCCCGTGCCACCAGGAGGAGTTCTCGTGCGGGCTGCCGTGCGGCAAGCCGCTGCCCTGCGGCAAGCACACATGCAACAAGCTCTGCCACAAGGGCGAGTGCGCCACCACCAAGTGCGTGCAGCAGTGCACGGAGAGGCGGCCGGGCTGCGGGCACCCGTGCGGGGCGCCGTGCCACGCGGCCGCCGACGAGGAGACGCCGTGCCCGGCGACCGCGCCGTGCCGCCTCACTGTGCGCGCCACGTGCCTCTGCGGACGCCGCTATGCCGAGAAGGCCTGCGCCGATAACTCCAGAGACTTTGCCAAATCCATGAGCACGCTGGTGGCGAGCAAGATGCAAGACGGCAGCTCTGTGGACTTGTCAGACGTTACCCGGCCGGGGGCCAATTTGAAGACGCTCGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGATGGCGCTGGTGCTGCAGATCCGCAACCCGGACACGTCGAGCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCCAGTGGGCGGCGCGCGACCCCGCGTTCGCGGCGCAGGTGCACGGCAAGCTCTCGCAGCTGGTGCAGCTCGCCAAGAAGTCGAAGCAGAAGACCCGCAGCCACTCGTTCCCGTCGATGAACCGCCAGAAGCGGCAGTTCGTGCACGAGCTGTGCGAGCACTTCGGCTGCGAGTCGGTCGCGTACGACGCGGAGCCCAACCGCAACGTCGTCGCCACCGCCGACCGCGAAAAGTCGTGGCTGCCAGCGATGAGCGTGCTGGAGGTGCTGGAACGCGAGGCGGGCAAGCGACGCGTGCCGGGCCCCATGCTGCGCGCCGCTCCCCCCTCCGCCGCCACCGCCGCCTCCTACGCCTCCGCCTCGTCCGCCGCCGCGACGCCCGCGCACGCCAACAAGTCGGGCGGTTGGGCCACTCTGACGTCGAAGAACAGCAACGCGTGGGGCGCGCGGGCCGGAGCCGCCGCCGCCGCCGCCCCGCACCCCGCGCCCACCCCCGCACCCGCTGCCCCCGCGCGCCGACCGCCCCTCATCGACTACTTCGACGACCCACCGACCAACTGA
- Protein Sequence
- MERNAAEDEQYANSYLTYREERQDGRRPVTSEKLQLVPASPTRQKSTYKPRSPERAENTELTQRERLSEQLDRGVLECLVCCERVKQSDAVWSCGNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTSDEVPTEYLCFCGAMRAPEWVRGAAGAHGCGERCRRARACPHPCPLPCHPGPCPLCQATLNKKCGCGAETRSVVCSSKLEQVCGRSCGRKLPCGEHYCTLSCHEGDCEPCKETLEQVCHCPAARSRVVECSAATGGERSWACGEACGRVLACGAHVCRAPCHAPPCRPCHLLPDAVLTCPCGKIKLSEKEKRNTCTDPIPLCGNICAKPLTCGPPNDPHFCKLECHDGACPPCPDKTVMNCRCAHTSRDVDCVDVPQMIDNIFCTKKCNKKLSCGRHRCRELCCALESHRCPQVCGRTLSCGLHRCDNFCHTGHCPGCGRLGFSELRCECGASVLLPPVACGARPPACAALCARARACGHPPHHACHPGECPPCVVLTAKRCHGGHEERKTIPCHQEEFSCGLPCGKPLPCGKHTCNKLCHKGECATTKCVQQCTERRPGCGHPCGAPCHAAADEETPCPATAPCRLTVRATCLCGRRYAEKACADNSRDFAKSMSTLVASKMQDGSSVDLSDVTRPGANLKTLECDDECRVEARTRQMALVLQIRNPDTSSKLAPRYSEHVRQWAARDPAFAAQVHGKLSQLVQLAKKSKQKTRSHSFPSMNRQKRQFVHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLEREAGKRRVPGPMLRAAPPSAATAASYASASSAAATPAHANKSGGWATLTSKNSNAWGARAGAAAAAAPHPAPTPAPAAPARRPPLIDYFDDPPTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -