Basic Information

Insect: Incurvaria masculella
Gene Symbol: -
Assembly: GCA_946894085.1
Location: CAMPPJ020000412.1:251570-262796[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.14 11 7.6 2.8 1 23 189 211 189 211 0.96

2 13 0.11 9 7.9 8.4 1 23 218 241 218 241 0.96

3 13 0.12 9.8 7.8 6.3 2 23 270 292 269 292 0.95

4 13 0.12 9.8 7.8 6.3 2 23 321 343 320 343 0.95

5 13 1.7 1.4e+02 4.2 2.2 1 23 347 369 347 369 0.92

6 13 0.00088 0.072 14.5 4.8 1 23 374 397 374 397 0.98

7 13 0.015 1.2 10.6 0.5 2 23 402 424 401 424 0.94

8 13 0.21 17 7.0 0.1 3 21 437 455 437 460 0.88

9 13 0.0024 0.2 13.1 0.4 3 23 469 490 468 490 0.94

10 13 0.00028 0.022 16.1 2.0 2 23 530 551 529 551 0.97

11 13 0.0013 0.11 13.9 1.0 1 23 557 579 557 579 0.99

12 13 3.4e-06 0.00028 22.1 0.9 1 23 585 607 585 607 0.97

13 13 4.1e-05 0.0034 18.7 0.1 3 23 615 636 614 636 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.14	11	7.6	2.8	1	23	189	211	189	211	0.96
2	13	0.11	9	7.9	8.4	1	23	218	241	218	241	0.96
3	13	0.12	9.8	7.8	6.3	2	23	270	292	269	292	0.95
4	13	0.12	9.8	7.8	6.3	2	23	321	343	320	343	0.95
5	13	1.7	1.4e+02	4.2	2.2	1	23	347	369	347	369	0.92
6	13	0.00088	0.072	14.5	4.8	1	23	374	397	374	397	0.98
7	13	0.015	1.2	10.6	0.5	2	23	402	424	401	424	0.94
8	13	0.21	17	7.0	0.1	3	21	437	455	437	460	0.88
9	13	0.0024	0.2	13.1	0.4	3	23	469	490	468	490	0.94
10	13	0.00028	0.022	16.1	2.0	2	23	530	551	529	551	0.97
11	13	0.0013	0.11	13.9	1.0	1	23	557	579	557	579	0.99
12	13	3.4e-06	0.00028	22.1	0.9	1	23	585	607	585	607	0.97
13	13	4.1e-05	0.0034	18.7	0.1	3	23	615	636	614	636	0.95

Sequence Information

Coding Sequence: ATGTGGGGCGTGCGCGCGTGCCGCGTGTGCCTCGCGAGCGGCGTGCGGCTGCACGGCGTGGACCCGCAGGCGCGCGCGCCCTCACTCTACCACTGCTACCGGGATATCAGCGGTATAGCGTGGTCGCACGGAGTTCAGTTCTTGTGCTACGAGTGTGCGTGGCAGCTGCGGAAGGCTCACGGGCTGCGAGAGCGGAGTCTCCGTGCACATTCACTGCTGGAGGCACTCTTCCACAGCACAGGAGAGGTGACAGAAGCAGACATTCTCGCTATCGATCGAGCTGCAGATAATTTCAAGTCACCGTTAAAGGTGTGCATACAAGAAGCCATAGACGTCACCGATGAAGGCATCATGGAGTGCTCCATCAACAACCATTTGAAAATAGAGCTGGAAGGAGCCATTGTTGAGGCACCTCGCCCCCAACCTCCAGCGGTGCGTCGCAAAACGAAGAAGGAGCTGGCTGCTTTTTACTCACGCTTCGTATCGGTCGCGCCGATGACTCAGCAGGACGCCTACGACGAGATGAAGAAGCGTCTGGACATGTCCGACCGCCGGGCACCAGCGTACAAGTGTGAACTGTGCCATAAGGGATTTTGGCGCGCGGCAACGCATGAGAAACACATGGCGAAACACGATCCGAAGAACGGAGATTTCGAGTGTGACTACTGTCACTTCCGCTTCGGCAACCGGCACAGCCTGCTCGACCACTTCCGGCACTTCCACAACCTGCGCTTCTCCTGCAAGCGCTGCGCCTACACCTGCACCAACCGCGCTGCGCCTACACCTGCACCAACCGGTGAGCACGTCGAGTGTGACTACTGTCACTTCCGCTTCGGCAACCGGCACAGCCTGCTCGACCACTTCCGGCACTTCCACAACCTGCGCTTCTCCTGCAAGCGCTGCGCCTACACCTGCACCAACCGCGCTGCGCCTACACCTGCACCAACCGGTGAGCACGTCGAGTGTGACTACTGTCACTTCCGCTTCGGCAACCGGCACAGCCTGCTCGACCACTTCCGGCACTTCCACAACCTGCGCTTCTCCTGCAAGCGCTGCGCCTACACCTGCACCAACCGAAACTTGGCACGCCAGCACGAGGCGTGGCACAACGGCACTCTTTACTCCTGTAAGCACTGCAACACCAACTTTAGCCACTACGGCGCGATGCAGAGCCACGTGCGGCGCGAGCACGCGCTGGAGCTGCCGTGCCGGCTGTGCGGGCGCTGCTTCGTGGGGCGGCGCGGGGTGCGCGCGCACACTCTGCGAGCGCACGCCGGCCAGGCGCGCGCGGACGGCGAGCCGGTGGGCTGTGATCCGTGCGGCGTGCAGTTCGCGTCCGCCGACGCGTTCCGCCGCCACCTGCTGGTGTCCGCGCGGCACGGCCTCGCCGACACCACGGTGGCGTGCGCGGCGTGCGGCGAGGCGTGCGCGAGCCGCGCCGACCTGCGGCGACACCGCCGCTCGCAGCACGCCCACCAGGCGGCGGCGGGCGGCGCGGCGGCGGCGGCGGCGGCGGCGGGGACGGCGGCGGCGGCCGGACCCGGCGGAGCGCGCAGGCCGCGCGCGCGCCGCCCGCGCCCCGACATGGTGTGCGAGACGTGCGGGAAAGTGTTCCACACGAATTGGGACTTCGACACACACCGGCGCAAGCACACGGGCGAGAAACCCTTCAAGTGCAAGTTCTGTAGCAAGGCGTTCGCTCTCAAAGGGATACTTAAGGTCCACTTGAGAAGTCACACGCAGGAGAAGCCACACTCATGCGAAATATGTAACAAGGCGTTTGCGGAGCGCAGTAACATGCTTCGACACATGCAGGTGCACTCGGACAGCAAGCCGGTGGCGTGTGAAGTGTGCGAGAAGGAGTTTAAAAATGCCTCCTCGCTGAAGGTCCATGTGAAGTACGTGCACCTGAAGCGGCCGTACCCGCTGCGGCGGCGGCGAGCTCCCCCCCCTCCGCCCGCCGCCGCCCTCACACCCGTACCCGGCTGGAAGTAG
Protein Sequence: MWGVRACRVCLASGVRLHGVDPQARAPSLYHCYRDISGIAWSHGVQFLCYECAWQLRKAHGLRERSLRAHSLLEALFHSTGEVTEADILAIDRAADNFKSPLKVCIQEAIDVTDEGIMECSINNHLKIELEGAIVEAPRPQPPAVRRKTKKELAAFYSRFVSVAPMTQQDAYDEMKKRLDMSDRRAPAYKCELCHKGFWRAATHEKHMAKHDPKNGDFECDYCHFRFGNRHSLLDHFRHFHNLRFSCKRCAYTCTNRAAPTPAPTGEHVECDYCHFRFGNRHSLLDHFRHFHNLRFSCKRCAYTCTNRAAPTPAPTGEHVECDYCHFRFGNRHSLLDHFRHFHNLRFSCKRCAYTCTNRNLARQHEAWHNGTLYSCKHCNTNFSHYGAMQSHVRREHALELPCRLCGRCFVGRRGVRAHTLRAHAGQARADGEPVGCDPCGVQFASADAFRRHLLVSARHGLADTTVACAACGEACASRADLRRHRRSQHAHQAAAGGAAAAAAAAGTAAAAGPGGARRPRARRPRPDMVCETCGKVFHTNWDFDTHRRKHTGEKPFKCKFCSKAFALKGILKVHLRSHTQEKPHSCEICNKAFAERSNMLRHMQVHSDSKPVACEVCEKEFKNASSLKVHVKYVHLKRPYPLRRRRAPPPPPAAALTPVPGWK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -