Basic Information

Gene Symbol
-
Assembly
GCA_946894085.1
Location
CAMPPJ020000442.1:705342-736231[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.016 1.3 10.6 0.7 2 23 441 462 440 462 0.93
2 14 0.017 1.4 10.5 0.7 3 23 544 566 542 566 0.94
3 14 0.089 7.3 8.2 0.3 1 23 572 594 572 594 0.93
4 14 0.013 1.1 10.8 3.6 1 23 600 622 600 622 0.98
5 14 0.049 4 9.0 0.3 1 23 811 833 811 833 0.96
6 14 0.0023 0.19 13.2 1.8 1 23 981 1004 981 1004 0.95
7 14 0.0028 0.23 12.9 1.3 1 23 1011 1034 1011 1034 0.97
8 14 0.0006 0.049 15.0 1.0 2 23 1053 1075 1052 1075 0.96
9 14 0.00034 0.027 15.8 0.3 1 23 1090 1112 1090 1112 0.98
10 14 0.00045 0.037 15.4 0.1 1 23 1122 1145 1122 1145 0.96
11 14 0.0039 0.32 12.5 0.0 3 23 1153 1173 1151 1173 0.96
12 14 6.8e-05 0.0055 18.0 0.1 1 23 1185 1207 1185 1207 0.96
13 14 0.00038 0.031 15.6 0.5 1 23 1213 1235 1213 1235 0.98
14 14 0.00045 0.037 15.4 1.4 1 23 1241 1264 1241 1264 0.97

Sequence Information

Coding Sequence
ATGGCCTACGTCTACGTACCGTGGATCCGGGACATCTTGGTCAGCGCATCGACAGAGAATCTGATACGCATCCTGGAAGGTGCCAAGAAGGAGGCCGGCTCCGCTGGTGATGATGATGGCATATGGATCGTAGAAAGCAACAAGCGATTCATCTCTAAGGAGACACTGGATACGCACGAGTCACGCCGCTGCCACGCCAAGAAGGGCAAGGCGCACGCGCCCGGTCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGACGCACGAGTCACACCGCTGCCAAGCCAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGACGCACGAGTCACGCCGCTGCCAAGCCAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCCAGAAGCCAAGAAGGGCAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGACGCACGAGTCACGCCGCTGCCACGCCAAGAAGGACAAGGCGCACGCGCCCGGCCCCGTGTGTATAACCGAGGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGACGCACGAGTCACGCCGCCGCTGCCACGCCAAGAGGGGCAAGGCGCACGCGCCCGACCCCGTATGTATAACCGATGATGTCTACATGCCGAGCGAGGCGGACTTCCTGAAGAGGTATCGCGGAAGGAAGAGAGGCATCAAGGCGACGTCGGACCCGAGCCTGTTGACGTGTGACGACTGTGGCGCCACCTTCACCTCCAAAGTTCGGCTCAAGTTCCACATTCAGTTCCACAGTCAGTGCAAGTTGCGTACCTCCGACTTGCGGTACTCATGCGGGCGTTGCGTTGGCGACGACAGCACATTTACCACCGAGGCAGAGCTTTTCGACCATCTCCACTTCTCGCACGGCAAGCGCAGCCGTTGGATCTGTCCCGTCAGCGGTTGCCACAAGACCTTCTTCCTCAGGGCTATGGCCACCGAGGCAGAGCTTTTCGACCACCTCCACTTCTCGCACGGCAAGCGCAGCCGTTGGATCTGTCCCGTCAGCGGTTGTCACAAGACCTTCTTCCTCAGAGCGATGCTGACAAAGCACAGCCGTGCGCACACGGACACACGCCGCTACGTCTGCGGCGTGTGCGACAAGCGGTTCCTCGACAAGCAGACCCTCGACGAGCACAGCGTCACGCACCTGAAGATAAAGCCGTTCCAGTGCCACCTCTGCCTGAAGCAGCTGACGCGGCGCTCGCGGCTGCGCATGCACCTGCGCGCGCACGAGGAGCACCTCGCGCCGCGCCTCGTGCGCGCCTGCCTCGCCTGCCAGCGCGCCTTCAAGAACTACGCGGAGGCCGAGGTGGGAACACTACACGGGAAACAGATAGAGCCGCTCCAATACCACCTCTGCCTGAAGCAGCTGACGCGGTGCTCGCGGCTGCGCATGCACCTGCGCGCGCACGAGGAGCACCTCGCGCCGCACCTCGTGCGCGCCTGCCTCGCCTGCCAGCGCGCCTTCAAGAACTACGCGGAGGCCGAGGTGGGTGCGCCGACACGCCGCGAGCACGCGTGGACTTCGGAGTGTGCGATCAAGCAGGATGAGCCCAAAAAAGCCGAGGAGGCGCCGGGCTCGCCGAAGAGCGGTGTGGTTACCATGCACATTGAGAACCTGGATTCCGACGCGAAAGAGTGCGATGAAATCGAACCGTTCACTTTACCAAATCCCCAAAACAAGATCCAAAATTGTCTGTTCGACCCCACCGACACACAGGAGTTACAGCGCATGATATCGGAGATGACTGTGGAGACGCGGCGGCTGATTCGGTTGGTGAAAATTGAAAAGGCTTTTCGCTGCGAGTACTGCGAAGACGTGTTCTACGTGGAGAGTTCGCTGAACTTGCACCGGGCTCAACACAAGGGTGTCAAGAATCCCTTCACCTGCCACATCTGCAAACGGTGGACCACGTCGGTGCGCAGCATGGTGGGCGCACGCGCGTGCGGTGCGGCGCGCGGGGCGTCGGCTCAGAGCAGCGGCGCCGGCGTGTCGGCCGCGTCGTCAACGCCGGCCGACGGCGTGGCGGCGTGGCTCAGCGCTGCTCGGCGCGGGGCGCATCGGCGCGGCTGCGCGGATGGCCGGCCAGCGTGCTCGGCTACCTCGCCACGTCGCTGCCGGCGACGGCGGCCCATCGGCGAGTCGTGTCTCGGATGCACGACGCACAAGACGACGCACGGCTTCTTCAAGCGGTCCGTCGCGGAGGCGAAGCGGGAGGCCGGCGCGGGGGAGGCGGGGCGCGAGCAGGCGGGCCCGGCCGCCGACGGCATCGTCGGCTACGGCGACTTCCCCGTCTGCAAGCACTTCCTATGCGAGGACTGCGGCCGTTCGTACCTGCACTGGACGTACCTGCAGGTGCACCGGCGCATGAAGCACCCGGTCGGCAACTGCGTCCACAAGTGCGGAGAGTGCAGCACCACCTTTCCCAACAGTTGGGGTCTAGCGTACCACAAGCGCAAGATGCATGGACCTAACCCACCTCGTGAGGAGCGGAAGTCCAAGAGCTTTGATGTGAAGTTGCCCTGCCGTGACTGCAGCGAGTACTTCAGAAACAAGAGCGCTCTGTACACGCACCGCCGCAAGGAGCACGCTTCGGAGCGCCAACCATACACGCCTAAAGGGCTCGGTCTGTTCTCGTGTGCGACGTGCGGCAAGTGCTACGCGGGCAGGCCCGGGCTGGAGGCGCACCTGCGCTCGCACGGCGCGGACGGGGCCGGCGACGCGCCGTACGCGTGCGCTCGCTGCGGCGTCGCGTACGCGTCCTCCTCGCAACTAACGCGCCACGTCATGTCGATGCACGCGGAGGAGGCGTCGCAGATGTGCGCGACGTGCGGCGCGAAGTTCGCGCTGCCCGCGCAGCTATCGGCGCACGTGCGCACCCACACGCCGCGCGACCGCTCGCCGCCGCGGCGCGCGCACGCGTGCGCCGGCTGCGGGCGCGCGTTCCGCACGGCGAGCATGCTCGCCGAGCACGCGCGGATCCACACCGGCGAGCGGCCATACCCGTGCGACCTGTGCGGCATGTCCTTCCGCAGGTCAACTGCGCGCCGCAACCACCGGCTGATCCACACTGGAGAACGCCCGTACGCCTGCCCGCAGTGCCCCAAGCAGTTCCGCATCCGCTCCGACATGCGTACTCATTTTCGGACCAAACACCCACATCAGATCCTTGTACTCGAAGGCACCGCCAATCTGATGCTCGACCCCGAGGTGACCCTGGAGAACCTGCAGCGGTCGCAGGACGAGGGCAGCGCGCGGTGGAGCGAGCGCATCATGGCCGCGCTCGAGTCGTGCCAACCGAAGCGGCCCCCGCCGCCGCCGGACGCACCCGGGTGCGGCGCGCGGCGCGGGCGCGGCATCGCGCGGCGCGACCGCGCGCTGGTGCCGGCGGCGCGGGACGACGCGCTGCAGCTGCGCTACGGCGGCCGGAGCACCTTCCACGTGGAGATCAGCGACGTCGCGGTCGACGACCTGACGAACCTCCTTGGCGGCACCCTGACCCACGATGGTCACGGCGTCCTCCTCAACTCGGGCGAGTTCGTCCCTTTCGACTCGGTCGTGAGGGGCCGGGCCCAGCCCCCCGACCCGCCCGTCTACTACCCGGAACCTACCCTTCCTCAAGACCCGGCCGTCTACTACCCGGACCGTTCGCATCCCCTAGCCCCGGCTGTGTACCACCCGGACCTTCCGCATCCCCCAGACGTGGCCGTCCTCTACCCGGACCGTTCGCATCCCCTAGCCCCGGCTGTGTACCACCCGGACCTTCCGCATCCCCCAGACGTGGCCGTCCTCTACCCGGACCGTTCGCATCCCCTAGCCCCGGCTGTGTACCACCCGGACCTTCCGCATCCCCCAGACGTGGCCGTCCTCTACCCGGACCGTTCGCATCCCCCAGACGCGGCAGACTACTACTCGGACCCTTCGCATCCCCCAGACCCGGCTGTCTACTACCCGGACCCTCCGCATCACCCAGACGTGGCCGTCCTCAACCCGGACCATTCGCATCCCGCAGACCCGGCCATCTACTACCCGGACCCTCCGCATCCCCCAGACTCGGCCGTCTACTACCCGGGCAATCCCCGTCCTCCAGACCCGACCGTCTACTATCCGGCAGATAACATCCCGGTCGCCGGCTCCACCTACGACCCGGGCACCGTGGGCACGAGCGCGTGGCAGCAAGGCTATCGAGGCTGTGACACTGATTACACCCTTATGGAACAGTCTGCATCCATGTACGAAGATCGACCGTTGCAGCAGGAGACTAGAGAGTATGCCGATGAAGTGGATCTGGGCGTAGTCGAAGGCGAGAGAGACGAACTCTTTGAACAAAATCCCAACCGAGAATTTATGAACGTGGACAGCTTGAATCCGCAGCTCTACGACAATGCTCCGGAGATGTTGCAGGCTGGTGTGGAAAATATCCCGTACGGGAATGGATCGAACGTGTGCGCGAATGATGAGGAAGACAAATTTAAGATTGAGAAGAAACCAAATGTTGCGGATGTTTTGGGTGATAGTTGTGCTGGAGGAGACGACAATGTATTAGGGCAGCGCTGA
Protein Sequence
MAYVYVPWIRDILVSASTENLIRILEGAKKEAGSAGDDDGIWIVESNKRFISKETLDTHESRRCHAKKGKAHAPGPVCITEDVYMPSEADFLKKGKAHAPGPVCITEDVYMPSEADFLKKGKAHAPGPVCITEDVYMPSEADFLKKGKAHAPGPVCITEDVYMPSEADFLKTHESHRCQAKKGKAHAPGPVCITEDVYMPSEADFLKKGKAHAPGPVCITEDVYMPSEADFLKTHESRRCQAKKGKAHAPGPVCITEDVYMPSEADFLKKGKAHAPGPVCITEDVYMPSEADFLKKGKAHAPGPVCITEDVYMPSEADFPEAKKGKAHAPGPVCITEDVYMPSEADFLKTHESRRCHAKKDKAHAPGPVCITEDVYMPSEADFLKTHESRRRCHAKRGKAHAPDPVCITDDVYMPSEADFLKRYRGRKRGIKATSDPSLLTCDDCGATFTSKVRLKFHIQFHSQCKLRTSDLRYSCGRCVGDDSTFTTEAELFDHLHFSHGKRSRWICPVSGCHKTFFLRAMATEAELFDHLHFSHGKRSRWICPVSGCHKTFFLRAMLTKHSRAHTDTRRYVCGVCDKRFLDKQTLDEHSVTHLKIKPFQCHLCLKQLTRRSRLRMHLRAHEEHLAPRLVRACLACQRAFKNYAEAEVGTLHGKQIEPLQYHLCLKQLTRCSRLRMHLRAHEEHLAPHLVRACLACQRAFKNYAEAEVGAPTRREHAWTSECAIKQDEPKKAEEAPGSPKSGVVTMHIENLDSDAKECDEIEPFTLPNPQNKIQNCLFDPTDTQELQRMISEMTVETRRLIRLVKIEKAFRCEYCEDVFYVESSLNLHRAQHKGVKNPFTCHICKRWTTSVRSMVGARACGAARGASAQSSGAGVSAASSTPADGVAAWLSAARRGAHRRGCADGRPACSATSPRRCRRRRPIGESCLGCTTHKTTHGFFKRSVAEAKREAGAGEAGREQAGPAADGIVGYGDFPVCKHFLCEDCGRSYLHWTYLQVHRRMKHPVGNCVHKCGECSTTFPNSWGLAYHKRKMHGPNPPREERKSKSFDVKLPCRDCSEYFRNKSALYTHRRKEHASERQPYTPKGLGLFSCATCGKCYAGRPGLEAHLRSHGADGAGDAPYACARCGVAYASSSQLTRHVMSMHAEEASQMCATCGAKFALPAQLSAHVRTHTPRDRSPPRRAHACAGCGRAFRTASMLAEHARIHTGERPYPCDLCGMSFRRSTARRNHRLIHTGERPYACPQCPKQFRIRSDMRTHFRTKHPHQILVLEGTANLMLDPEVTLENLQRSQDEGSARWSERIMAALESCQPKRPPPPPDAPGCGARRGRGIARRDRALVPAARDDALQLRYGGRSTFHVEISDVAVDDLTNLLGGTLTHDGHGVLLNSGEFVPFDSVVRGRAQPPDPPVYYPEPTLPQDPAVYYPDRSHPLAPAVYHPDLPHPPDVAVLYPDRSHPLAPAVYHPDLPHPPDVAVLYPDRSHPLAPAVYHPDLPHPPDVAVLYPDRSHPPDAADYYSDPSHPPDPAVYYPDPPHHPDVAVLNPDHSHPADPAIYYPDPPHPPDSAVYYPGNPRPPDPTVYYPADNIPVAGSTYDPGTVGTSAWQQGYRGCDTDYTLMEQSASMYEDRPLQQETREYADEVDLGVVEGERDELFEQNPNREFMNVDSLNPQLYDNAPEMLQAGVENIPYGNGSNVCANDEEDKFKIEKKPNVADVLGDSCAGGDDNVLGQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-