Imas004556.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- -
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000032.1:714200-748712[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00022 0.018 16.4 0.4 1 23 720 742 720 742 0.95 2 10 7.4e-05 0.006 17.9 1.7 1 23 749 771 749 771 0.98 3 10 0.00032 0.026 15.9 0.6 1 23 847 869 847 869 0.98 4 10 0.0027 0.22 13.0 0.0 2 21 951 970 950 973 0.88 5 10 0.0021 0.17 13.3 0.3 1 23 992 1014 992 1014 0.96 6 10 1.6e-05 0.0013 20.0 0.6 1 23 1031 1053 1031 1053 0.98 7 10 0.0015 0.12 13.8 0.2 1 23 1059 1081 1059 1081 0.97 8 10 0.00083 0.067 14.6 0.3 1 23 1087 1109 1087 1110 0.95 9 10 0.25 20 6.8 0.0 3 23 1125 1145 1123 1145 0.96 10 10 0.024 1.9 10.0 0.1 1 20 1292 1311 1292 1314 0.93
Sequence Information
- Coding Sequence
- ATGAAGCCTTGGGTTTCATCGCGACGTCGGGTGGCGAGGGCTCCAAGCATCCGTTTTTCCATCCAGGAGCGACCGTCGGGCTCCGAGTCTATCGAAAGGGACGTCAGGCAGCCGCGACCGCCACCGAGGCGGCCCCCCCCTCAACTGCCACCGCTCGGCTTCCTCCATCGCCATCCATTGGAGAGTGAGAAGAATCAGAAGGCAGCAACCATAGGACTTCCCGTCAACGAACCCCAGAGAAGACAATTCAGGACCGGCGTTATAATGGGGCTCCGAAAGGTTGCATTCAACTTGCTGCGCAAGGAAGCCTTGATCTACGAGGTTAGGATCCGGGGTGAGACACCCAGCGAAAAAGTTGCTCTCCTCAGGAAGCAGATGTCAACATTGGGCCAAGCTTTCCCTAGTGAAGATATACTAACAACCGACGAAGACCCCCAGTCGGAAATAAACATAGTTCGGCAACAGTTAGGCGCGCTACGGGAGCAGTCGCCGGCCGATTGCCCCAGCGTGCGCGCGACTCTAGATCATCTTTACAATCGCATCGAACGGGTCGAAACGGACACGGAGGAGCTGCGCAGCGACAAGGAAGACGCATTCGCCCTGTTCTCCGAGATTGAGGCGATCTTCGAGGTAGGAGAGGATACATTTTCACAGGCAGAGGACACCCACGTCAGCGAGGACGTCGAGTTGGCTGTTCCGGCGCCAGTAGCGCTTGCCGCGAGCCGTGCTGAGGGCGCGACTCCGAATCACAAGCACGCGCTGGCTGTGGCCAAGCTCGGCTTGACGTATGACGGTGCATCCAGCGTGCGTTCCTTCCTGGAACGCTTGGAGGAGCTCTGCACGTCGCGCGCCATTGCGCACGCCCAGCTGCTTACCTCTGCCCCCGAACTCTTCCGAGGCCCCGCCTTAGTCTGGTACCGTAGCATAAAGGAGTCCGTCGTGTCTTGGTCAGAGTTGCGTGCGTCACTGCTCCGAGACTTCGGTGGCGTGCACTTCGACCACGAGCTGCTCGACGCGCTGCGTGCCCGAACCCAAGGGAAGGATGAGAGCGTCGTCATGTACTTTGCAATAATGACTACGTTGAACCAACGACTGCAAGAGCCTATGTCAGACAGGGCGCTCATGCGAATCCTTCAGCGTAATCTACGGCCTTCTTTCACGGGTCTACTATCTTTAGTTGAGTTTTCTACTGTCGAACAACTGAAAGAGTACTGCGCCCGCATCGAAGCTGGTCGCGCAATGAGCCGCCAGTTCAAAGAGCCTACGGATTGCGGTGTGCTCGAACCGGAATACGCCTACAAGGCTCCAGCTAAGCCGAAGGTTAGCTCAGCAGAAGCGACGCCCAGGAGCCCTAAGAAGTACTGTGCTCGGTGCAAGTCCCGTGATCACGGTTATATGGAGTGCCCGAAACCGAGCAACATTAAATGTTACGGCTGCCTGAAACCTGGAGTGAAGCTGGCCGATTcagtcaacgagagcactggattctctcccaacttcctagtgtatggaagggaattggtgacgGACGGCGCCTTCTTCGACGAGCCCCGCGACGAGTCGCCAGGCGATGCAGTACTGACGCCAGCGGAGAACCGGGCAGAATGCCTTGGCGAGCTCCGAGCAGTCTTCGATAAGGAGCGACCGTCGGGCTCCGAGTCTATCGAAAGGGACGTCAGGCAGCCGCGACCGCCACCGAGGCGGCCCCCCCCTCAACTGCCACCGCTCGGCTTCCTCCATCGCCATCCATTGGAGAGTGAGAAGAATCAGAAGGCAGCAACCATAGGACTTCCCGTCAACGAACCCCAGAGAAGACAATTCAGTATGGAAAGTGGGGCTTTCCAGCTCCGCTGGGAGGATGATGGAAGGTCGGGGGTTCAGACGATCGCAGACACGGATCAGATCGCAGCGGAGAACCTGATGTACCTGGCCCAGGACGTGATGGGACAGCTGGCTGGTTACACGGAGATAGTGGCGGGCCCCGAAGTGGAGTGCGTCACCGAAGAGGTCATCACCGATGACTGGGTGCAGCCCGGCGGTCAGGAGAGGGTGGAGGTGCCGATGGACCAGCTAGCGTGCTCTCCCGTCGAGCTCAAGGTTTACGATGTGGACGTTCCGCTGCCCACCGATCAGGACGAGTACACGGCGATGCGGCCGTACCCGTGCGACTTCTGCTCGCGCCGATTCCGCAAGAAGGCGGCGCTCATGAACCACATGGTGGCGCACCAGAACGACCGTCGGCCGCACGTGTGCAACCTGTGCGGGCTGCGCTACGTGCGCAAGCAGGACCTCATGCAGCACCTCAAGACGCACGCGTACGTGCCCCAACCCGACGAGCCTGATTATAGTAATGAATTCAAAACGGTGTACGTGCAGAACGGCGTGTGGGAGAACATGACGTCGGCACGCACGCAGCAGTGGTCGCGACGGCGGCCGGCGGCCGAGCCCGCGCCGCCGCCGCCCCCCTCCCCGCCGCCGCCGGCGCCGCCGCGCACCCCGCCGCCGCCCTCGCCCCCGCCCGCCGACCCGCGCCGCCCCTTCGTCTGCCGGCACTGCGGCGTCGGCTTCGCCAGGGAGAAGGCGCTGCAGTCCCACTCTAGGATCCACGGCGGCGACTCGCCGCTGGAGTGCGGCGCGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTGGCGGCGCACACGCGCGCGCGCCACCCGCACCGCGCGCCCGCCGCGCGCTCCCGCGACCCCTCGCCCTTCCAGCCCTCCGACAGCTCCTCTTACGACGACGATCTGGAGTACTCGCAGTCGGCGACGGAGCAGTCTCCCCCGGAGCGGCGCAGCGAGGGCGCCAACGTGGGCCCCGAGCTGTACTGTCGCGACTGCGGCGTCGCGTTCCAGCGCGCCGACCTGCTGCGGCGGCACGTCGTCGCCGCGCACAGCCACAAACGGCACGACAGCGAGACGATGGCGAGCGACGTGTCGGGCGCGGAGCACACGTGCGACGTGTGCGGCGAGACGTGCAGCGACGCCCTGCAGCTGCTGGCGCACGCCGAGATGCATGCGCGGGACTCCACCTCCAGGATAAAACGTTCCAACACTGGTCGGCACTTCCCTTGTCACGAATGTGGTAAGGTATTCGGGTCACGCAGCTCGCAGCAGATTCACGTCCGCATCCACACGGGCGAGCGGCCCTACGCGTGCCGCTTCTGCTGGAAGGCGTTCGCGGACGGCGGCACGCTCCGCAAGCACGAGCGCATACACACCGGTGAGAAGCCATACGCGTGCGCAGTGTGCCCGCGGGCATTCAACCAGCGCGTGGTGCTCCGGGAACATGTACGCTCGCACCACTCCGCGCCCGACAATCGACGCGCAGGGTCGGCGACGTTTGGTTGCGCGGTGTGCGGCGCGACGTTGCCGTCCAGCACAGAGCTGGTGCAGCACCTCATCGAGCACTGCGACGCCAACACGGCGCTGAGGCGACAGCCGCAGGTGGGTCCCCGAAAGTACAAGCGGCGGCGACGCGTCAAGCAGGAGCCACGCTCTGAGTCGCCGCAGGAGTGGGGTGCGCCAACCTCCCCACCGGCGTCGCCATCCGCGCGCGACGAGTCGCCGCCCGCCAGCCCGCCGGCGCCGGCGCCGCGCGCGCCGCCGCGCCGCGCCCGCCGCACGCGCCGCGCCGCCCCGCCCCGCCCCAAAATGATCCACACTTCGGAGGAGAGCACGCGGCCCCGCACCAAGAATGTGCGCTCGACGGTGACGGCGCAGCGCTCGCCCGCCGTCACCTTCCCGCTACTCTCCACCGAGCCGGCGGACGATTTGCGCGCTATACTGCCTCAGCTGAAGCAGGAGCCGGAGGAGGAGCCGCGGGTGAAGCGCGAGCCGGGCGCGCCGTTCCGCTGCGAGATGTGCTCGCTGCAGTTCGACCGCCGCGACGACCTGCTGCTGCACGTGCCCGTGCACATTTGA
- Protein Sequence
- MKPWVSSRRRVARAPSIRFSIQERPSGSESIERDVRQPRPPPRRPPPQLPPLGFLHRHPLESEKNQKAATIGLPVNEPQRRQFRTGVIMGLRKVAFNLLRKEALIYEVRIRGETPSEKVALLRKQMSTLGQAFPSEDILTTDEDPQSEINIVRQQLGALREQSPADCPSVRATLDHLYNRIERVETDTEELRSDKEDAFALFSEIEAIFEVGEDTFSQAEDTHVSEDVELAVPAPVALAASRAEGATPNHKHALAVAKLGLTYDGASSVRSFLERLEELCTSRAIAHAQLLTSAPELFRGPALVWYRSIKESVVSWSELRASLLRDFGGVHFDHELLDALRARTQGKDESVVMYFAIMTTLNQRLQEPMSDRALMRILQRNLRPSFTGLLSLVEFSTVEQLKEYCARIEAGRAMSRQFKEPTDCGVLEPEYAYKAPAKPKVSSAEATPRSPKKYCARCKSRDHGYMECPKPSNIKCYGCLKPGVKLADSVNESTGFSPNFLVYGRELVTDGAFFDEPRDESPGDAVLTPAENRAECLGELRAVFDKERPSGSESIERDVRQPRPPPRRPPPQLPPLGFLHRHPLESEKNQKAATIGLPVNEPQRRQFSMESGAFQLRWEDDGRSGVQTIADTDQIAAENLMYLAQDVMGQLAGYTEIVAGPEVECVTEEVITDDWVQPGGQERVEVPMDQLACSPVELKVYDVDVPLPTDQDEYTAMRPYPCDFCSRRFRKKAALMNHMVAHQNDRRPHVCNLCGLRYVRKQDLMQHLKTHAYVPQPDEPDYSNEFKTVYVQNGVWENMTSARTQQWSRRRPAAEPAPPPPPSPPPPAPPRTPPPPSPPPADPRRPFVCRHCGVGFAREKALQSHSRIHGGDSPLECGACGELCWSREALAAHTRARHPHRAPAARSRDPSPFQPSDSSSYDDDLEYSQSATEQSPPERRSEGANVGPELYCRDCGVAFQRADLLRRHVVAAHSHKRHDSETMASDVSGAEHTCDVCGETCSDALQLLAHAEMHARDSTSRIKRSNTGRHFPCHECGKVFGSRSSQQIHVRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDNRRAGSATFGCAVCGATLPSSTELVQHLIEHCDANTALRRQPQVGPRKYKRRRRVKQEPRSESPQEWGAPTSPPASPSARDESPPASPPAPAPRAPPRRARRTRRAAPPRPKMIHTSEESTRPRTKNVRSTVTAQRSPAVTFPLLSTEPADDLRAILPQLKQEPEEEPRVKREPGAPFRCEMCSLQFDRRDDLLLHVPVHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -