Basic Information

Insect: Incurvaria masculella
Gene Symbol: -
Assembly: GCA_946894085.1
Location: CAMPPJ020000236.1:1017145-1019926[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.1e-06 0.00033 21.8 1.7 1 23 263 285 263 285 0.98

2 9 3.9e-08 3.2e-06 28.2 1.6 3 23 293 313 291 313 0.98

3 9 0.00013 0.011 17.1 0.3 1 23 319 341 319 341 0.98

4 9 2.1e-05 0.0017 19.6 1.6 1 23 347 369 347 369 0.99

5 9 2.9e-05 0.0024 19.1 1.7 2 23 472 493 471 493 0.96

6 9 2.6e-09 2.1e-07 31.9 1.6 1 23 499 521 499 521 0.98

7 9 0.036 2.9 9.4 0.6 5 23 531 549 527 549 0.94

8 9 8.2e-05 0.0067 17.7 1.5 1 23 555 577 555 577 0.99

9 9 0.025 2.1 9.9 0.8 1 23 583 607 583 607 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.1e-06	0.00033	21.8	1.7	1	23	263	285	263	285	0.98
2	9	3.9e-08	3.2e-06	28.2	1.6	3	23	293	313	291	313	0.98
3	9	0.00013	0.011	17.1	0.3	1	23	319	341	319	341	0.98
4	9	2.1e-05	0.0017	19.6	1.6	1	23	347	369	347	369	0.99
5	9	2.9e-05	0.0024	19.1	1.7	2	23	472	493	471	493	0.96
6	9	2.6e-09	2.1e-07	31.9	1.6	1	23	499	521	499	521	0.98
7	9	0.036	2.9	9.4	0.6	5	23	531	549	527	549	0.94
8	9	8.2e-05	0.0067	17.7	1.5	1	23	555	577	555	577	0.99
9	9	0.025	2.1	9.9	0.8	1	23	583	607	583	607	0.95

Sequence Information

Coding Sequence: ATGCGCCTGAACGGTTGTAGCTGCCCCGAGCAAGGCACGGCTGCCGCGGCGAACAAGACGTTGCGGATATTGATTTCGCCAGATACGACAGCACCCTACGTGCTGTACAAAGATGGTGTTGAGCGCGCGCCACCGGGTGTGGGAGGACAGTGGGGTGGCGGCATGGGGGGCATGCTGGACGGCGGCTACCAGACTGTACATGGAGTGCAGCAGCACCAGAGCCCCGGGGGACCCTCGCCGGCGCCGCCAGAACCCCAGCTCGCGTCCCCGGCGCCTTCGCCGTACACTCCTGCACCGCCCCCACCTCCGGATGATGATGCCGTCCAACAGATGGCCCAGCAACAACAGCAGCAACAGCAGCAACATCAACAGCAACAACAGCAACAACAGCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAACAGCAGCAACAACAGCAGCACTTACAACAACAACCCTCCCCAGAACACATGCAAGTTGACCAACAACAGCTTCAACCTCCCACCCAAGAGCAATTGGACAGAACGCCCTGCTTTATCCCCCAACCTGACCTCCAACAGCAGTACGGAGCTCAATACTTTAAAGAGACGAGAGGCGGCGGGCATATGCTCGGAGCGGGCGGATTCCCCCTTCACTACCTAAAGCAAAATGGAGGAGTGCTCTCCCTCGACGGCCCTCTAGAGCAATACGCGACGCCCGAACTGCGGGGTCTGCCAGACCTCATCCAAAGCGAACCGCAATCCAAACAGAGAAAGCATAACCCTAACTCAGAATTAAGGCTGTTCAAAtgcctgacttgtggcaaggacttcaaacagaagtcgacactgctgcagcacgaacgtattcacacggattcgcgaccctacggctgtcccgagtgcggcaaacgctttcgccagcagtcgcacctcacccagcacttgcgcatccatgccaacgagaagccctacgcctgcgtctactgcccgcggtccttccgccagcgggccatcctcaaccagcacctacgcatccattccggtgagaagccctattcgtgcggcgagtgcggcaaacatttccgccagaaggccatcctgaaccagcacgtccgcacacaccaagACGTGTCGCCGCACCTGATCTTCAAAAACGGCTCGACGCCGACGCTGTGGCCGCAGGACGTTCCCTTCCCCCCGGACGAGGGAAAGGAGGAGGTGCAGTCGACCTACGGCGACGGCGACTGCCAAACTCCGGACCAACGTGGCTCCTGCTTCTCTCCCGGAGACGTTGCGCAGTACCCCGCCTACTTTAAGGACACTAAAGGCCTAAACCACACCGTATTCAGCGGCGGCATCTCGCTGCAGTACCTCAAGGGCGGTAAACTCCCCGACATGCTCGGCGGTCGGACgatgcctctctacgtgcgctgcccgatctgccagaaggagttcaaacagaagtcgacgctgctccagcacggctgcatccatatcgagtcgcgcccctacccgtgccccgactgtggaaaacgcttccgacagcaatcgcacctcacgcagcacctccgcatccacaccaacgagaagccctacggctgcatctactgcccacgcttcttccgccagcgcacgatcctcaaccagcacctgcgcatccacaccggcgagaagccctacaagtgcacgcagtgtggaaaggacttccggcagaaggcgatcctcgatcagcacacgcgcacgcatcagggcgaccggccgttctgctgtccgatgcccaactgccggcgccgattcgcaaccgagccagaggtgaaaaagcacatcgacaaccacatgaacccgcacgcgggcaaggCGCGCCGCAACTCCGAGTGCAAGGTGCGCCCTCTGCCGCCGGTGAGCGTCGGCGTGGGAGGTGCGGTCGTAAAGCCGGAACTGTACTTCCCGCAGTGCTACCCGCCACCGTTCCAGCAGTTCACGCCCTCGAACGCGCCCGAGTTCAAGCCGAACGTGGGACTCGGCGTGCCGGGCGGCTTGGCCAGCGGCGTGCCCGGCGGCGTGCCGTGCCTGCCGGCGCAGTGA
Protein Sequence: MRLNGCSCPEQGTAAAANKTLRILISPDTTAPYVLYKDGVERAPPGVGGQWGGGMGGMLDGGYQTVHGVQQHQSPGGPSPAPPEPQLASPAPSPYTPAPPPPPDDDAVQQMAQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQHLQQQPSPEHMQVDQQQLQPPTQEQLDRTPCFIPQPDLQQQYGAQYFKETRGGGHMLGAGGFPLHYLKQNGGVLSLDGPLEQYATPELRGLPDLIQSEPQSKQRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYSCGECGKHFRQKAILNQHVRTHQDVSPHLIFKNGSTPTLWPQDVPFPPDEGKEEVQSTYGDGDCQTPDQRGSCFSPGDVAQYPAYFKDTKGLNHTVFSGGISLQYLKGGKLPDMLGGRTMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPDCGKRFRQQSHLTQHLRIHTNEKPYGCIYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAGKARRNSECKVRPLPPVSVGVGGAVVKPELYFPQCYPPPFQQFTPSNAPEFKPNVGLGVPGGLASGVPGGVPCLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00772240;
90% Identity: -
80% Identity: -