Basic Information

Insect: Incurvaria masculella
Gene Symbol: -
Assembly: GCA_946894085.1
Location: CAMPPJ020000061.1:225324-235972[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.14 12 7.5 1.2 9 23 73 87 72 87 0.95

2 12 0.0002 0.016 16.5 0.3 1 23 93 115 93 115 0.99

3 12 0.00021 0.017 16.4 2.3 1 23 121 143 121 143 0.97

4 12 4.1e-07 3.3e-05 25.0 0.9 1 23 149 171 149 171 0.96

5 12 2.4e-05 0.002 19.4 0.3 1 23 177 199 177 199 0.97

6 12 7.8e-05 0.0064 17.8 0.7 1 23 205 227 205 227 0.98

7 12 0.0054 0.44 12.0 8.1 1 23 233 255 233 255 0.97

8 12 7.5e-05 0.0061 17.9 0.2 1 21 261 281 261 282 0.96

9 12 5.5e-06 0.00045 21.4 1.1 1 23 290 312 290 312 0.99

10 12 1.2e-05 0.00097 20.4 0.6 1 23 365 387 365 387 0.98

11 12 0.00013 0.011 17.1 1.1 1 23 425 447 425 447 0.98

12 12 0.0017 0.14 13.6 0.5 3 23 462 482 461 482 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.14	12	7.5	1.2	9	23	73	87	72	87	0.95
2	12	0.0002	0.016	16.5	0.3	1	23	93	115	93	115	0.99
3	12	0.00021	0.017	16.4	2.3	1	23	121	143	121	143	0.97
4	12	4.1e-07	3.3e-05	25.0	0.9	1	23	149	171	149	171	0.96
5	12	2.4e-05	0.002	19.4	0.3	1	23	177	199	177	199	0.97
6	12	7.8e-05	0.0064	17.8	0.7	1	23	205	227	205	227	0.98
7	12	0.0054	0.44	12.0	8.1	1	23	233	255	233	255	0.97
8	12	7.5e-05	0.0061	17.9	0.2	1	21	261	281	261	282	0.96
9	12	5.5e-06	0.00045	21.4	1.1	1	23	290	312	290	312	0.99
10	12	1.2e-05	0.00097	20.4	0.6	1	23	365	387	365	387	0.98
11	12	0.00013	0.011	17.1	1.1	1	23	425	447	425	447	0.98
12	12	0.0017	0.14	13.6	0.5	3	23	462	482	461	482	0.98

Sequence Information

Coding Sequence: ATGGCGGAGTGTCCTAGCCTGCGGCTAGCGGCTAATTTGCCTACCTACATACCTACGCCCTACACGCCGCCGCGGCCGTGCCGCCTCCCCGCCTCCCCGCTGCTCCGCCGCCGCCACCAGCCAGATGCTTTGTATCGCAACGTTCCGTCCCTCCCCCTCCCCCTCCCCTCTGCTCCGGCCCGTTGCCTTTGCCCGAGCGCCGCGAAAGCACAGGGGGTTTTCAAGAAAACCAGTCACCTGAAGCGGCACGAGCGCTCCCACGAGGACAACCGCCCGTTCAAGTGCGGGCTGTGCGTCAAGTCGTTCGCGCTGGAGGACGAGCTCACCGAGCATCAGAACAAGCACAAGGGCGTGAAGCCGCACGTGTGCCCGGTGTGCGCGAAGGCGTTCTCGCAGCGCTCGACGCTGACGTGCCACCTGCGCGTGCACACGCGCGAGCGCCCCTACCTGTGCCCCACCTGCGGCAAGCGCTTCGACTCCAGCACGAACCTCGCGCAGCACCAGCGGCGGCACGCCGGCGTCAAGGCGTTCGCCTGCACGTACTGCCCGGGGCGCTTCGTCAGCAAAGGCGAGCTGAACTCCCACATGAGTACGCACACGGGGGCGCGTCCCTTTGTCTGCGACACGTGTGGCTCCTCCTTCACCAAGCCGAACTCGCTCGCCAAGCACAAGCTGCGCCACCTCGGCATCAAGCCGCACGAGTGCGACGTCTGCTGCACCAGGTTCACGAGCAAGGAGCACCTAAAGAGACACTACCGCATTCATACGGGAGAGAAACCGTACCGCTGCGAGTTGTGCGAGCGCGCCTTCACGCAGAGCAACGATCTAGTCAAGCACAAGCGTGCCGCGTGGGGACATGCGAAACCGTACCGCTGCGAGTTGTGCGAGCGCGCCTTCACGCAGAGCAACGATCTAGTCAAGCACAAGCGGTCGCACTTTGGCGACAATCTCTACAAGTGCGTGTCCTCTGTCCGTCTGTCTGTGCCGCAGCAACGATCTAGTCAAGCACAAGCGGTCGCACTTTGGCGACAATCTCTACAAGTGCGTGTCCTCTGTCCGTCTGTCTGTGCCGCGTGGGGACATGAGAAACCGTACCGCTGCGAGTTGTGCGAGCGCGCCTTCACGCAGAGCAACGATCTAGTCAAGCACAAACGGGCGCACCGCGGCGACAACCTCTACAATCAAGCACAAACGGGCGCACCGCGGCGACAACCTCTACAAGTGCGTGTCCTCTGTCCGTCTGTCTGTGCCGCGTGGGGACATGAGAAACCGTACCGCTGCGAGTTGTGCGAGTGTGCCTTCACGCAGAGCAACGATCTAGTCAAGCACGAGCGGGCGCACCTCGGCGACAACCTCTACAAGTGCGTGTCCTCTGTCCGTCTATGCGGGGAATGCACCGAAAGTTTCCGCCTCAAGACCGAACTCCGGGACCACCTCTCGAGCCACTTCATCCACTCGCAGGTCGCGGCCGGCGTTCCCATATCCCTGCCGCCGGTGCTCGCGAACAGACCGCCGCCGGCGAGGCGCGCCGTCGAACAGACCGCGCCCCCCAAGGCGGTCGTCGTCACGCACGCCTCGAGCGACACGGTGCTCACCGTGAACAAGTCCGAACTCGTTCAGAGCCTCCTCGGCGGCGGGAGGCGCGAGCGGCTGATGGACCACGTGCGGAACGTTCCGACCGCGATCAGTGTCAGGAGGATACGGACAGATCACGACTGCGTGGAGAGGCCGAAGGTCGAATTGAAAGCGCTCGAGGGTGATAAAAGCGACTCAAATGCTTGA
Protein Sequence: MAECPSLRLAANLPTYIPTPYTPPRPCRLPASPLLRRRHQPDALYRNVPSLPLPLPSAPARCLCPSAAKAQGVFKKTSHLKRHERSHEDNRPFKCGLCVKSFALEDELTEHQNKHKGVKPHVCPVCAKAFSQRSTLTCHLRVHTRERPYLCPTCGKRFDSSTNLAQHQRRHAGVKAFACTYCPGRFVSKGELNSHMSTHTGARPFVCDTCGSSFTKPNSLAKHKLRHLGIKPHECDVCCTRFTSKEHLKRHYRIHTGEKPYRCELCERAFTQSNDLVKHKRAAWGHAKPYRCELCERAFTQSNDLVKHKRSHFGDNLYKCVSSVRLSVPQQRSSQAQAVALWRQSLQVRVLCPSVCAAWGHEKPYRCELCERAFTQSNDLVKHKRAHRGDNLYNQAQTGAPRRQPLQVRVLCPSVCAAWGHEKPYRCELCECAFTQSNDLVKHERAHLGDNLYKCVSSVRLCGECTESFRLKTELRDHLSSHFIHSQVAAGVPISLPPVLANRPPPARRAVEQTAPPKAVVVTHASSDTVLTVNKSELVQSLLGGGRRERLMDHVRNVPTAISVRRIRTDHDCVERPKVELKALEGDKSDSNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -