Imas025159.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- ZNF579
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000265.1:146827-153739[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.12 9.6 7.8 5.4 2 23 14 36 13 36 0.93 2 21 0.059 4.8 8.7 2.3 2 23 43 65 42 65 0.94 3 21 8.4e-06 0.00068 20.8 0.5 1 23 77 99 77 99 0.99 4 21 0.00025 0.021 16.2 0.1 1 23 103 125 103 125 0.97 5 21 3.9 3.1e+02 3.0 0.3 1 23 130 153 130 153 0.85 6 21 0.062 5 8.7 2.4 1 23 159 182 159 187 0.88 7 21 0.017 1.4 10.4 0.5 1 12 189 200 189 207 0.91 8 21 0.22 18 6.9 0.1 2 23 230 251 229 251 0.94 9 21 2.2e-05 0.0018 19.5 0.3 1 23 255 277 255 277 0.98 10 21 0.035 2.8 9.5 0.3 1 23 282 305 282 305 0.91 11 21 0.021 1.7 10.1 1.0 1 23 311 334 311 334 0.96 12 21 0.95 77 4.9 0.6 1 23 341 364 341 364 0.90 13 21 0.00072 0.059 14.8 1.9 3 22 372 391 370 391 0.94 14 21 0.004 0.32 12.4 0.8 1 23 395 418 395 418 0.92 15 21 0.15 13 7.4 0.1 2 23 443 465 442 465 0.92 16 21 0.011 0.87 11.1 7.4 1 23 487 509 487 509 0.97 17 21 0.0044 0.36 12.3 0.4 1 23 513 535 513 535 0.98 18 21 0.00075 0.061 14.7 0.1 1 23 541 564 541 564 0.97 19 21 0.11 9 7.9 1.0 3 23 573 594 571 594 0.91 20 21 6.5e-08 5.3e-06 27.5 0.8 1 23 620 642 620 642 0.97 21 21 1.3e-06 0.0001 23.4 0.8 1 23 648 670 648 670 0.98
Sequence Information
- Coding Sequence
- ATGAACTCTCACATCGTCGTTCACCAGAGCGGACGATGCGCTTGCGGCATTTGCAAAAAAGTATTTCACTCGAAGAACACATTAGATATTCACTTCCGCCACATTCACCTCAAGAAGAAATCGAACAAGTGCCACCGCTGCGGCGAGAACTTCTCCTCGTACGGCAGCAAGCGGATGCACGAGCTCCGAGAGCACGGTGTAGTCGGCCCCACGTACCCCTGCACTAGTTACCAGTGCGTCCTCTGCCCCGAGAGCTACAAAAACTTCACAAATCTCAACCGCCATATCAACGTACACTTCCAGAACTACATTTGTCCCGTTTGCGGCAAGTACTTCACTAGCGCCGCTCGCCTACTCGGACACAATCGCTCGCACGTCACCGGTGAGTTCGCCTGCAAGTTGTGCGCCCAAGTGTTCCAGACGAGACTGCTTCGGGACAATCACATCCAAGGCTCCCATAAAAAGAGCCAGCGTTATCGGTGTCCGCAGTGTCACATCACGTTCGCGTCCTACCAGTTCCGCCAGAACCACCTGGTCCAGGAACACAAGCAGGAGGTCCACCGCTTCCAGTGTCCTTACTGTCCGACCACATTCAAGAGGGAGGTGGTCAGGAGcgttcacaataaaccgatagacacgacgtacggggaaggggtcctgccctacaagttgacgcgcaacgagcagcgctgccaggtgtgcggggcgtcgttcggcgcgttcctcccgctcaaccagcacatgaacgcgcactaccagaactttatctgcgagacgtgcggcaaaggcttcgtgacggctcagcggctgcagacgcacgcgcgcacccacgagcgcggcgcgttcgcgtgcgcccagtgcggcgagcagttcgcgacgcgctccctgcggcacgcgcacgcggaccgggcgcaccgcgcgggccgccgctaccgctgcccgcgctgcccggtcaagttcgtgtcgtaccacgagcgcgggcggcacctacgcgacgtgcactcggagcggaccgccgtgttcgcgtgcccggcgtgcccgcgcgtcttcgatctgtgcagccgccggacgacgcacgtgaagctcgcgcaccttcaggagcggaaccacctctgcacgcagtgcggcatgaagttcttccgcaagtttgagctgcgcgaccacatgAACACTTCGAGTTCGTACGTGTGCTTTTATTGCGACGCCAAGTACTCAGAGTTTAGTCAGCTCCGCGCGCATACCAGCGACAATCACCCCGTGTCCCAACAAACCTTTCGGAAGGCCAAGTGGGTTCCCACGCATACTAAAGTAGAAATCTCGGATTTGAAATGCAAACTGTGTAGCGTATCGTTCCCAACCGTCGAAGCAATACGGGATCATCTCATATATATTCACGGGAAAGACATCAACAACAGCCACGGCGACGGAACAGTCAGCTACAAGCTCGACACCGACGCCTTCGACTGCCACATCTGCAGCATGCACTTCACTCGCTTCAGGCATCTCTCCAACCACTTGAGTGTGCACTATCGCAACTTCGTCTGCGACGTGTGCGGCGCGCCCTTCCTCGACCGCTGCCTGCTAAGGCAGCACGTGCAGACGCACAACCGCGGCGACACGTACCCGTGCCCGCAGTGCGGCGTCGCGCTCCCCACTCAGACGAAGCTCCGGAGTCACCTGTCGCGGGTGCACCAGCGCGCCGGCTACCGGCTCGCGTGCCCGCACTGCCCGGAGCGCTTCAAGGAGTACCGACCGCGCGTGCACCACATGAAGGCGGTGCACAACGTGCAGAACCTGAACTGCCCGTGCCCGGCGTGCAAGCCGACCGCCGACCGCCCTCCGACCGGTGAGAAACGCTTCGAGTGCCCCGAATGCGGCAAGCAGTTCACCCGCCGCAGTCATCTGATGGCCCACCAGGtggtccacaccggcgtcaaggcgttcaagtgcgaggtctgcgagaaggtgtacgcccgcaagaagacgctcaccacacacatgatgatacacaacaatgtgcgtcgTTGCTCCTGGAGCCGCGGGGTGGCGCTGCTAGCGCCCAAGATGTCGGCTTGCTATCAGCTGTTGGTAGCACCACAGATTACATAG
- Protein Sequence
- MNSHIVVHQSGRCACGICKKVFHSKNTLDIHFRHIHLKKKSNKCHRCGENFSSYGSKRMHELREHGVVGPTYPCTSYQCVLCPESYKNFTNLNRHINVHFQNYICPVCGKYFTSAARLLGHNRSHVTGEFACKLCAQVFQTRLLRDNHIQGSHKKSQRYRCPQCHITFASYQFRQNHLVQEHKQEVHRFQCPYCPTTFKREVVRSVHNKPIDTTYGEGVLPYKLTRNEQRCQVCGASFGAFLPLNQHMNAHYQNFICETCGKGFVTAQRLQTHARTHERGAFACAQCGEQFATRSLRHAHADRAHRAGRRYRCPRCPVKFVSYHERGRHLRDVHSERTAVFACPACPRVFDLCSRRTTHVKLAHLQERNHLCTQCGMKFFRKFELRDHMNTSSSYVCFYCDAKYSEFSQLRAHTSDNHPVSQQTFRKAKWVPTHTKVEISDLKCKLCSVSFPTVEAIRDHLIYIHGKDINNSHGDGTVSYKLDTDAFDCHICSMHFTRFRHLSNHLSVHYRNFVCDVCGAPFLDRCLLRQHVQTHNRGDTYPCPQCGVALPTQTKLRSHLSRVHQRAGYRLACPHCPERFKEYRPRVHHMKAVHNVQNLNCPCPACKPTADRPPTGEKRFECPECGKQFTRRSHLMAHQVVHTGVKAFKCEVCEKVYARKKTLTTHMMIHNNVRRCSWSRGVALLAPKMSACYQLLVAPQIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -