Imas018734.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- ZBTB41_1
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000184.1:6336-28280[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.24 20 6.8 0.2 1 20 25 44 25 47 0.93 2 17 0.00029 0.023 16.0 0.4 1 23 53 75 53 75 0.97 3 17 0.007 0.57 11.7 0.5 1 23 80 102 80 102 0.94 4 17 5.1e-05 0.0041 18.4 3.2 1 23 110 132 110 132 0.97 5 17 3e-05 0.0025 19.1 3.9 1 23 138 160 138 161 0.96 6 17 7.9e-06 0.00065 20.9 0.5 2 23 218 239 217 239 0.95 7 17 1.3e-05 0.0011 20.2 0.4 1 23 245 268 245 268 0.97 8 17 3.5e-05 0.0028 18.9 0.9 1 23 274 296 274 296 0.98 9 17 0.00013 0.01 17.1 0.5 1 21 302 322 302 323 0.94 10 17 0.27 22 6.6 0.2 1 23 360 382 360 382 0.94 11 17 0.0089 0.73 11.3 0.3 1 23 388 410 388 410 0.98 12 17 1.3 1.1e+02 4.5 0.5 1 9 415 423 415 437 0.69 13 17 0.00026 0.021 16.1 4.2 1 23 445 467 445 467 0.97 14 17 0.00044 0.036 15.4 2.0 1 23 473 496 473 496 0.98 15 17 0.0001 0.0083 17.4 0.2 2 23 549 570 548 570 0.94 16 17 1.7e-05 0.0014 19.9 0.8 1 23 576 599 576 599 0.97 17 17 1.3e-05 0.0011 20.2 0.7 1 23 605 627 605 627 0.98
Sequence Information
- Coding Sequence
- ATGCAGTGCAAGTCGGAGACGCCGGGACAATGCCGCCTCTGTCTGAGCACGGCGCGGAGCGAGGCCGGAACCTATGACTGTGACGTGTGTGGAGCCAAGCTCAAGTCGGAGGAGTACTTCCGTCTCCACTATGAGCCGCACGTTAGCGACAAGCGCTTCGAGTGCGACATATGCGGCAGCGTCTACAAGACTCGCACGCAAATGTTTCGACACCTCGTCGTGCACAAGCCGCCCATGTTCCTGTGCGACGTCTGCGGGAAGAGACTGCCGAAGATCAGTACGCTCAAAACGCACTTCCTTTCTCACGCCAGCCTAGAGGATCGCCCGCACAAGTGTAACATCTGCTCGAGGACTTTCATAACCAGAGACAAGCTCACGATACACGTGCGGTTTCACGACAAGGTCAAGCCGTTCAAGTGTAAGCTTTGTCCGTACGAGTTCTACGTGAACTTCGAGCTGACGCGGCACATGAAGACCCACCATTGCATCGGTGACACGGAGGAAAGGGCAAAGAGGGAGAAATTGAAACGAACGGTATCCTTGTGCAGGAACAAACGGATGAACCGAGATGAGACTGGCGCGCAGAAGAAGAACTCTGGGGTGAAGCCTCTGGTGAAGCAGAACAAGGGGCGCGGCGGCGGAGGCGATTTGAGGTGCAACATTTGCGGGAAGTCTTTCTCTCAGAAGGTGTGCTTGGACGCGCACATCGTCGTCCACACGGGCGATCGGCCGTTCAAGTGCGAGGAGTGCGGGCAGGCCTTTAAGTTTCAGTCGAACGTGCTCACGCACGCGCGCTCCGTGCACCGCGCGGACAAACTGCACCAGTGCACCGTCTGCGGCGCGCAGTTCAAGTTGAAAGGGAACCTAACGGCGCACACGAAGATCCACAGCGGGGAGAAGCCGTTCGCGTGTGACCTGTGCGATCAGAAGTTCATTCGGAGCAGGAATCTGAGGAATCATTACAAGGGCGAAGTGGTTGTAGCTTGCTCGTGCGCCGACAATCGACCGCAGCTGCGCAGAGAAGACAAATCCAATCCTAAAGTCAAGTTACCTGTCAGAAATATAGAGACGGGCACCTTCGACTGTGACGTCTGCGGCGCCAAACTCAAGTCCGATGAATATTTCCGCCTGCACTACGAGGCTCACGTCAGCGAAAAGGACTACGAATGCGCCACATGCGGGAACCTGTACAAGACGCGGGCACAGATGTTCAAGCACCTCATTGTACACAAGCCGCACAGGTATTTGTGCCACATATGCGGAAAGAGCAAGCTGTCCATGGGTAGTCTCAATATCCACTTTCTCTCCCACTCCAGCCTCGAGGAGCGGCCGCACAAGTGTAACATCTGCTCGAGGACTTTTATCACCAGGGACAAGCTGAAAATTCACTCGAGGTTCCACGACGGAGTGAAGCCGTTCAAGTGCACGCTTTGTTCCAGCGCGTTCTACGTCAACTTCGAGCTGACCAAGCACATGAAGACGAATCACTCGATAGGTGAAACGGAAGAGAAGGTTAAAAGGGACAAAGTCAAACGGACCATCTCCCTGTGTAGGAACGCCCGCATGAGGCAAGGCGAAAAAGTGGACGATCTCGGATCCGACGGGGAAAAAGTAAACGCTAAGCCCAAGCGAAAGAACGATTTGACGTGTGATATTTGCGGAAAGACGTTCGCCCAAAAAGTTTGCCTCGATGCGCACGTCGTCGTTCACACGGGCGATCGTCCGTTCAAATGTGAAGAGTGCGGACAGACCTTTAAATTCCAATCGAACGTTTTGACGCATGCAAAGTCGGTGCACATGGCGGATAAGGTCCACCAGTGCACGGTATGCGGTGCGCGGTTTAAGCTCAAGGGGAACCTCACGGCCCACGTGAAAATCCACAGCGGGGAGAAGCCGTTCTCTTGTGATATTTGTGAACAGAAGCAGGAAGCCAAGAAGAATGTTTTCGTGAGTGGTTGGCGAAGGGGGATCCTCCGAAGCGGTGTCCCTACAGTCCACGCGCTGCTCCTGCTGTCGAAGGCTTTGGTAGATCAGAAAGAGAATAAAGCTGTCCATCTCCCTCCCTCCTGGTATGCCCTGCGCGCCCGCACCTTCAGTGCAGAGGTGGCGCCGCTCCGCATTATAAATTGTGATGCACTGTGA
- Protein Sequence
- MQCKSETPGQCRLCLSTARSEAGTYDCDVCGAKLKSEEYFRLHYEPHVSDKRFECDICGSVYKTRTQMFRHLVVHKPPMFLCDVCGKRLPKISTLKTHFLSHASLEDRPHKCNICSRTFITRDKLTIHVRFHDKVKPFKCKLCPYEFYVNFELTRHMKTHHCIGDTEERAKREKLKRTVSLCRNKRMNRDETGAQKKNSGVKPLVKQNKGRGGGGDLRCNICGKSFSQKVCLDAHIVVHTGDRPFKCEECGQAFKFQSNVLTHARSVHRADKLHQCTVCGAQFKLKGNLTAHTKIHSGEKPFACDLCDQKFIRSRNLRNHYKGEVVVACSCADNRPQLRREDKSNPKVKLPVRNIETGTFDCDVCGAKLKSDEYFRLHYEAHVSEKDYECATCGNLYKTRAQMFKHLIVHKPHRYLCHICGKSKLSMGSLNIHFLSHSSLEERPHKCNICSRTFITRDKLKIHSRFHDGVKPFKCTLCSSAFYVNFELTKHMKTNHSIGETEEKVKRDKVKRTISLCRNARMRQGEKVDDLGSDGEKVNAKPKRKNDLTCDICGKTFAQKVCLDAHVVVHTGDRPFKCEECGQTFKFQSNVLTHAKSVHMADKVHQCTVCGARFKLKGNLTAHVKIHSGEKPFSCDICEQKQEAKKNVFVSGWRRGILRSGVPTVHALLLLSKALVDQKENKAVHLPPSWYALRARTFSAEVAPLRIINCDAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -