Imas018418.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- -
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000182.1:45287-67955[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 37 0.48 39 5.9 0.0 2 23 56 77 55 77 0.97 2 37 0.0026 0.21 13.0 0.1 2 23 108 129 107 129 0.97 3 37 0.0026 0.21 13.0 0.1 2 23 142 163 141 163 0.97 4 37 0.0026 0.21 13.0 0.1 2 23 194 215 193 215 0.97 5 37 0.0026 0.21 13.0 0.1 2 23 246 267 245 267 0.97 6 37 0.0026 0.21 13.0 0.1 2 23 298 319 297 319 0.97 7 37 0.0026 0.21 13.0 0.1 2 23 350 371 349 371 0.97 8 37 0.0026 0.21 13.0 0.1 2 23 402 423 401 423 0.97 9 37 0.0026 0.21 13.0 0.1 2 23 454 475 453 475 0.97 10 37 0.0026 0.21 13.0 0.1 2 23 506 527 505 527 0.97 11 37 0.0026 0.21 13.0 0.1 2 23 558 579 557 579 0.97 12 37 0.0026 0.21 13.0 0.1 2 23 610 631 609 631 0.97 13 37 0.0026 0.21 13.0 0.1 2 23 662 683 661 683 0.97 14 37 0.00054 0.044 15.2 0.2 2 23 714 735 713 735 0.97 15 37 0.0013 0.1 14.0 0.4 1 23 741 763 741 763 0.98 16 37 0.00017 0.014 16.8 9.1 1 23 769 791 769 791 0.97 17 37 1.4e-05 0.0012 20.1 0.2 1 23 797 819 797 819 0.98 18 37 0.0059 0.48 11.9 0.4 3 23 827 847 826 847 0.98 19 37 1.4e-05 0.0011 20.1 2.4 1 23 853 875 853 875 0.98 20 37 4.9e-05 0.004 18.4 1.6 1 23 943 965 943 965 0.97 21 37 1.4e-05 0.0011 20.1 2.4 1 23 1010 1032 1010 1032 0.98 22 37 4.9e-05 0.004 18.4 1.6 1 23 1077 1099 1077 1099 0.97 23 37 4.4e-05 0.0036 18.6 1.9 1 23 1126 1148 1126 1148 0.97 24 37 0.01 0.85 11.1 2.2 1 16 1193 1208 1193 1213 0.90 25 37 4.9e-05 0.004 18.4 1.6 1 23 1219 1241 1219 1241 0.97 26 37 4.9e-05 0.004 18.4 1.6 1 23 1272 1294 1272 1294 0.97 27 37 4.9e-05 0.004 18.4 1.6 1 23 1339 1361 1339 1361 0.97 28 37 1.4e-05 0.0011 20.1 2.4 1 23 1418 1440 1418 1440 0.98 29 37 4.9e-05 0.004 18.4 1.6 1 23 1485 1507 1485 1507 0.97 30 37 4.9e-05 0.004 18.4 1.6 1 23 1555 1577 1555 1577 0.97 31 37 4.9e-05 0.004 18.4 1.6 1 23 1622 1644 1622 1644 0.97 32 37 4.9e-05 0.004 18.4 1.6 1 23 1689 1711 1689 1711 0.97 33 37 4.9e-05 0.004 18.4 1.6 1 23 1738 1760 1738 1760 0.97 34 37 4.9e-05 0.004 18.4 1.6 1 23 1828 1850 1828 1850 0.97 35 37 4.9e-05 0.004 18.4 1.6 1 23 1877 1899 1877 1899 0.97 36 37 0.0058 0.47 11.9 1.7 1 23 1905 1927 1905 1927 0.98 37 37 0.0036 0.3 12.5 5.1 1 23 1933 1955 1933 1955 0.98
Sequence Information
- Coding Sequence
- ATGCAGCCAGACAGCAAGCGTGGCGTTTTCGAGAACGTGTTGGGCAGCATCGAGAGTCCCAACAGTCACCGGCATGTGTACGAGGAGAACCGACGCAACGCATGTCTCACGAGCGAGAAACGCTTCGGCTACCTCAGTAATAAAGTTTTATCCCTTCCTGACATCAAGTGTGGTGTTTGCGAGGAGGCGTTGGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTGAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTGAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTGAGAAACACCACGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGAGATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTAAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTAAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTGAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTGAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTAAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTGAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTGAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTAAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCGAGAATATGAATAGCCACCGTCGCGTGCACGAGAAGAACCGACGCAACAAGTGCATGAAAAGTAAGAAACACCTCGGCTACCTCATTAATAAAGTCTTATCCCTTGTGCAGCCAGACATCAAGTGTGGCGTTTGCGAGAAGGCGTTCGGCAGCATCAAAAGTCTCAACAGTCACCAACGCGTACACGAGGAGAGCCGACGCTACGTGTGTCTCACTTGTGGAAAGCGCTTCGGATACCTGAGCGTGCTTAAAAACCACGAAAAGATCCATGCCGGCATAAAGATGTATTGCTGCCACATCTGCCATAAGACTTTTGTGCAAAAACAAAATTTGAAGACACACTTGAAGTTGCACAGTGGAGAGAAGTCATTCTCGTGCGGAGAATGCGGCAAGAAGTTCATCCAGGTGGGAAATCTGCGTGTGCACCTCCTCCGCCACTCCGGTGTCAAGAACGTCGCCTGCTCAGTGTGCACCATGAAGTTCTACGTGAAGGGGGACCTGGATAAACACCTGCGCTCGCACTCACAGGAGCGGCCATTCTCGTGCAAGCTGTGCGACAAGTCCTTTAAGACACAGAGCTTTCTCGTCATACACAACCGCACGCACACAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGAACGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAATGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAATACATAGAGCTTTCTCGTCATACACAACCGCACGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGAACGCACCCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAATACATAGAGCTTTCTCGTCATACACAACCGCACGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGTACCAACATACCTATTTACGTATATATTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCAGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAATACATAGAGCTTTCTCGTCATACACAACCGCACGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGTACCAACATACCTATTTACGTATATATGTGTGGTGGCAGTGGGCTTTTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAATACATAGAGCTTTCTCGTCATACACACCGCACGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGAACGCACCCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAATACATAGAGCTTTCTCGTCATACACAACCGCACGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGTACCAACATACCTATTTACGTATATATGTGTGGTGGCAGTGGGCTTTTGGTCAAGCACCTGCGCTCGCAATCGCAGGAGCGGCCGTTCTCTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAATACATAGAGCTTTCTCGTCATACACAACCGCACGCACCCAGTGGGGTTCTGGTCAAGCACCTACGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCACACCCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAATACATAGAGCTTTTTCGTCATACACAACCGCACGCACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGTACCAACATACCTATTTACGTATATATTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCACACCCAGTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAATGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGTACCAACATACCTATTTACGTATATATTGGGGTTCTGGTCAAGCACCTGCGCTCGCACTCGCAGGAGCGGCCGTTCTCGTGCAAGCTGTGCGACAAGTCCTTCAAGACACAGAGTTTTCTCGTCATACACAACCGCGCGCACCCAGGCGAGCGTCCATTCCCGTGCGACTTGTGCTCGATGCGGTTCATGTCTCGCAAAGACATGAAGAACCACCGCATGACGCACACGGGTGAGAAGCCACACAAGTGTGCACTCTGTTCACACGCCTTCATACAGAAGTGCGCGCTGAACCGGCACATGCGCGGTCACGCCAAGCAAACGTTGCCCTCTAACCCCGCACCGCCGCCGCAATACCCCGCCACCGCCGCCGAGTGGCTGCCCGCGCATATCGCCGCCACCCGCGCCACCTAG
- Protein Sequence
- MQPDSKRGVFENVLGSIESPNSHRHVYEENRRNACLTSEKRFGYLSNKVLSLPDIKCGVCEEALGSIENMNSHRRVHEKNRRNKCMKSEKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKNIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSEKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSEKHHGYLINKVLSLVQPEIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSKKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSKKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSEKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSEKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSKKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSEKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSEKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSKKHLGYLINKVLSLVQPDIKCGVCEKAFGSIENMNSHRRVHEKNRRNKCMKSKKHLGYLINKVLSLVQPDIKCGVCEKAFGSIKSLNSHQRVHEESRRYVCLTCGKRFGYLSVLKNHEKIHAGIKMYCCHICHKTFVQKQNLKTHLKLHSGEKSFSCGECGKKFIQVGNLRVHLLRHSGVKNVACSVCTMKFYVKGDLDKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRTHTGAAVLVQAVRQVLQDTEFSRHTQPNAPSGVLVKHLRSHSQERPFSCKLCDNGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGAAVLVQAVRQVLQYIELSRHTQPHAPSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRTHPGAAVLVQAVRQVLQYIELSRHTQPHAPSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGTNIPIYVYIGVLVKHLRSHSQERPFSCKQCDKSFKTQSFLVIHNRAHPGAAVLVQAVRQVLQYIELSRHTQPHAPSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGTNIPIYVYMCGGSGLLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGAAVLVQAVRQVLQDTEFSRHTQPRAPSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPVGFWSSTCARTRRSGRSRASCATSPSIHRAFSSYTPHAPSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRTHPGAAVLVQAVRQVLQYIELSRHTQPHAPSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGTNIPIYVYMCGGSGLLVKHLRSQSQERPFSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGAAVLVQAVRQVLQYIELSRHTQPHAPSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGAAVLVQAVRQVLQYIELFRHTQPHAPSGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGTNIPIYVYIGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGAAVLVQAVRQVLQDTEFSRHTQPRTPSGVLVKHLRSHSQERPFSCKLCDNGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGTNIPIYVYIGVLVKHLRSHSQERPFSCKLCDKSFKTQSFLVIHNRAHPGERPFPCDLCSMRFMSRKDMKNHRMTHTGEKPHKCALCSHAFIQKCALNRHMRGHAKQTLPSNPAPPPQYPATAAEWLPAHIAATRAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -