Imas004588.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Incurvaria masculella
Gene Symbol
-
Assembly
GCA_946894085.1
Location
CAMPPJ020000033.1:1-14793[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 2.1e-05 0.0017 19.6 4.4 1 23 12 34 12 34 0.98
2 25 3.2e-05 0.0026 19.0 4.6 1 23 40 62 40 62 0.99
3 25 3.2e-05 0.0026 19.0 5.3 1 23 68 90 68 90 0.97
4 25 6.9e-06 0.00056 21.1 7.1 1 23 96 118 96 118 0.97
5 25 4.4e-07 3.5e-05 24.9 3.0 1 23 124 146 124 146 0.98
6 25 8.7e-05 0.0071 17.6 6.7 1 23 152 174 152 174 0.97
7 25 1.7e-05 0.0014 19.9 6.4 1 23 180 202 180 202 0.98
8 25 4.2e-07 3.4e-05 24.9 1.9 1 23 208 230 208 230 0.98
9 25 8.3e-06 0.00068 20.9 7.7 1 23 236 258 236 258 0.98
10 25 3.4e-06 0.00028 22.1 7.4 1 23 264 288 264 288 0.93
11 25 6.2 5.1e+02 2.4 2.5 11 23 284 296 284 296 0.93
12 25 3.2e-05 0.0026 19.0 6.6 1 23 302 324 302 324 0.98
13 25 1.8e-05 0.0015 19.8 4.8 1 23 330 352 330 352 0.98
14 25 1.9e-06 0.00016 22.8 6.1 1 23 358 380 358 380 0.98
15 25 3.1e-07 2.5e-05 25.4 4.8 1 23 386 408 386 408 0.99
16 25 6.7e-08 5.4e-06 27.5 3.7 1 23 414 436 414 436 0.99
17 25 3.7e-06 0.0003 22.0 4.9 1 23 442 464 442 464 0.97
18 25 3.2e-05 0.0026 19.0 6.7 1 23 470 492 470 492 0.98
19 25 4.3e-06 0.00035 21.8 0.4 1 23 498 520 498 520 0.97
20 25 1.8e-06 0.00015 22.9 5.7 1 23 526 548 526 548 0.98
21 25 2.3e-05 0.0019 19.5 7.0 1 23 554 576 554 576 0.97
22 25 6.4e-05 0.0052 18.1 7.4 1 23 582 605 582 605 0.97
23 25 0.00063 0.051 14.9 0.3 1 23 611 633 611 633 0.96
24 25 0.015 1.2 10.6 3.0 1 23 643 665 643 665 0.98
25 25 0.0022 0.18 13.3 0.1 2 23 697 719 696 719 0.95

Sequence Information

Coding Sequence
CGTCATGCGAAGCGACACGCACAGGACAAGCCTTACGCGTGCACCACCTGCCACAAGAGCTTCGCGCGCAAGGAGCACCTCGACAACCACGTCCGTAGTCACACCGGCGAGACACCTTACAGGTGCCAGTACTGCGCGAAGACATTTACACGCAAGGAGCACATGGTGAACCATGTTCGCAAGCACACGGGCGAGACTCCGCACCGCTGTGACATCTGCAAGAAGAGCTTCACGCGCAAGGAACACTTCATGAACCATGTCATGTGGCACACCGGTGAGACACCCCACCATTGTCAGATTTGCGGCAAGAAGTATACTAGAAAGGAACACTTAGCGAACCATATGCGCTCCCATACAAATGACACCCCGTTTAGATGTGAACTCTGCGGGAAATCATTCACGCGTAAGGAGCACTTCACCAACCACATTATGTGGCACACCGGCGAAACCCCGCACCGTTGCGACTTCTGCTCTAAGACGTTCACTCGCAAGGAGCACCTACTGAACCACGTGCGCCAACACACAGGCGAGTCCCCGCATCGCTGCAACTACTGTAGCAAGAGCTTCACGCGGCGCGAACACCTGGTCAACCACGTGCGGCAACACACCGGGGAGACGCCTTTCCAGTGCGGTTACTGCCCCAAGGCCTTCACGCGCAAGGATCACCTCGTGAACCACGTGCGCCAGCACACGGGCGAGTCGCCGCACAAGTGCTCGTATTGCACCAAGTCCTTCACGCGCAAGGAGCACCTCACGAACCATGTGCGGCAGCACACGGGCGAATCGCCGCACCGCTGCCACTACTGCAGCAAGTCTTTCACGCGCAAGGAACACCTCACAAATCATATACGTCGAAGGGAGCACCTGAACAACCACGTTCGCCGCCACACCGGCGACTTGCCCCACAAGTGCCAATATTGCACGAAGGCTTTCTCCAGGAAGGAGCACCTCGTCAATCACACCAGACAGCACACGGGGGAAACGCCACACAAGTGCACGTACTGCGCAAAGGCGTTCAGCCGGAAGGAGCACCTCACGATCCACGTCCGGCAGCACACGGGCGAGACGCCGCACCAGTGCACGTACTGCAGCAAGGCGTTCTCGCGCAAGGAACACCTCACCAACCACATACGACAGCACACTGGCGAGACGCCGTACAAGTGTACGTACTGCACCAAGGCGTTCAGTCGCAAGGAACACCTCAACAACCACATCCGACAGCACACTGGCGAGACGCCGTACAAGTGCACGTACTGCCCCAAGGCGTTCAGTCGCAAGGAACACCTCACCAACCATATACGACAGCACACTGGCGAGACGCCGTACAAGTGCACGTACTGCCCCAAGGCGTTCAGTCGCAAGGAACACCTCACCAACCATGTGCACTTGCACACGGGCGAGACACCTCACAAGTGCCAGTTCTGCGCCAAGAGCTTCTCGCGCAAGGAACACCTCACCAACCACATCAGACAGCACACGGGGGAGACTCCGTTCAAGTGCTCGTACTGCCCGAAGGCGTTCAGTCGCAAGGGCCAGCTCGGGAGCCACCTGCTCGCGCACACGGGCGTCGTGCCGCACAAGTGCCAGTACTGTCCCAAGAGCTTCGTACGCAAGGAGCACCTCACCAATCACACGAGGATCCACACGGGCGAGTCTCCGCATCGCTGCGACCTCTGCCAGAAGACGTTCACGCGCAAGGAGCACCTCACGAACCACCTGAAGCAGCACACCGGCAACACGCCGCACACCTGCAAGATCTGCTCCAAGCCCTTCACGCGCAAAGAGCACCTTGTCAACCACATGAGCCGGTGTCACACGGGCGAGCGTCCGTTCAGCTGCGGGGAGTGCGGCAAGTCGTTCCCGCTTAAAGGCAACCTGCTGTTCCACGAGCGGTCGCACAACAAGGGCCCCGCCGCCAGCCGGCCCTTCCGGTGCGACCTATGCCCCAAGGACTTCATCTGTAAAGGCCACCTGGTGTCGCACCGGCGCGCACACATTGACAGCGGCGAGGTGGGACCGGAGGCGGCGGTGGCGGGCGCGGCGGAGGGGGGCGCGGGCGAGGCGGCGGCGGCGGCGGAGGGCCAGCTCATGTGCCAGCTGTGCATCAAGAGTTTCCCCGACGAGGCGGCGCTGCAGCGGCACGTCCGCAAGatacacgacagAGCATCAACAGAGCAGCGACCAGATGTAGCACAAAATCCGCAAGCTAACCCGAGTGTTATGCAGATGGCTGGACAGGTTCGCGGTGTGAGCGGCGTGGTGGGCGGAGCGTTCGTGCACCCGGCGCCGCCCGCGCCCGCCCCGCACCCCGCGCACCCGCCGCACCCGGCGCCGCTCCAGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence
RHAKRHAQDKPYACTTCHKSFARKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCHYCSKSFTRKEHLTNHIRRREHLNNHVRRHTGDLPHKCQYCTKAFSRKEHLVNHTRQHTGETPHKCTYCAKAFSRKEHLTIHVRQHTGETPHQCTYCSKAFSRKEHLTNHIRQHTGETPYKCTYCTKAFSRKEHLNNHIRQHTGETPYKCTYCPKAFSRKEHLTNHIRQHTGETPYKCTYCPKAFSRKEHLTNHVHLHTGETPHKCQFCAKSFSRKEHLTNHIRQHTGETPFKCSYCPKAFSRKGQLGSHLLAHTGVVPHKCQYCPKSFVRKEHLTNHTRIHTGESPHRCDLCQKTFTRKEHLTNHLKQHTGNTPHTCKICSKPFTRKEHLVNHMSRCHTGERPFSCGECGKSFPLKGNLLFHERSHNKGPAASRPFRCDLCPKDFICKGHLVSHRRAHIDSGEVGPEAAVAGAAEGGAGEAAAAAEGQLMCQLCIKSFPDEAALQRHVRKIHDRASTEQRPDVAQNPQANPSVMQMAGQVRGVSGVVGGAFVHPAPPAPAPHPAHPPHPAPLQHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00839585;
90% Identity
iTF_00839585;
80% Identity
iTF_00839585;