Imas003216.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Incurvaria masculella
Gene Symbol
-
Assembly
GCA_946894085.1
Location
CAMPPJ020000021.1:1447550-1453949[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 57 0.0037 0.3 12.5 0.5 2 23 33 54 33 54 0.95
2 57 0.00076 0.062 14.7 0.3 1 23 69 91 69 91 0.98
3 57 3.4e-06 0.00028 22.1 2.4 1 23 97 119 97 119 0.98
4 57 0.0041 0.34 12.4 0.1 2 21 125 144 124 145 0.94
5 57 3.4e-06 0.00028 22.1 2.4 1 23 166 188 166 188 0.98
6 57 0.007 0.57 11.7 0.2 2 20 194 212 193 213 0.95
7 57 1.9e-05 0.0015 19.7 1.3 2 23 213 234 212 234 0.96
8 57 0.0041 0.34 12.4 0.1 2 21 240 259 239 260 0.94
9 57 3.4e-06 0.00028 22.1 2.4 1 23 281 303 281 303 0.98
10 57 0.007 0.57 11.7 0.2 2 20 309 327 308 328 0.95
11 57 1.9e-05 0.0015 19.7 1.3 2 23 328 349 327 349 0.96
12 57 0.0041 0.34 12.4 0.1 2 21 355 374 354 375 0.94
13 57 3.4e-06 0.00028 22.1 2.4 1 23 396 418 396 418 0.98
14 57 0.0041 0.34 12.4 0.1 2 21 424 443 423 444 0.94
15 57 3.4e-06 0.00028 22.1 2.4 1 23 465 487 465 487 0.98
16 57 0.007 0.57 11.7 0.2 2 20 493 511 492 512 0.95
17 57 1.9e-05 0.0015 19.7 1.3 2 23 512 533 511 533 0.96
18 57 0.007 0.57 11.7 0.2 2 20 539 557 538 558 0.95
19 57 1.9e-05 0.0015 19.7 1.3 2 23 558 579 557 579 0.96
20 57 0.007 0.57 11.7 0.2 2 20 585 603 584 604 0.95
21 57 1.9e-05 0.0015 19.7 1.3 2 23 604 625 603 625 0.96
22 57 0.007 0.57 11.7 0.2 2 20 631 649 630 650 0.95
23 57 1.9e-05 0.0015 19.7 1.3 2 23 650 671 649 671 0.96
24 57 0.007 0.57 11.7 0.2 2 20 677 695 676 696 0.95
25 57 1.9e-05 0.0015 19.7 1.3 2 23 696 717 695 717 0.96
26 57 0.0041 0.34 12.4 0.1 2 21 723 742 722 743 0.94
27 57 3.4e-06 0.00028 22.1 2.4 1 23 764 786 764 786 0.98
28 57 0.007 0.57 11.7 0.2 2 20 792 810 791 811 0.95
29 57 1.9e-05 0.0015 19.7 1.3 2 23 811 832 810 832 0.96
30 57 0.007 0.57 11.7 0.2 2 20 838 856 837 857 0.95
31 57 1.9e-05 0.0015 19.7 1.3 2 23 857 878 856 878 0.96
32 57 0.007 0.57 11.7 0.2 2 20 884 902 883 903 0.95
33 57 1.9e-05 0.0015 19.7 1.3 2 23 903 924 902 924 0.96
34 57 0.007 0.57 11.7 0.2 2 20 930 948 929 949 0.95
35 57 1.9e-05 0.0015 19.7 1.3 2 23 949 970 948 970 0.96
36 57 0.0041 0.34 12.4 0.1 2 21 976 995 975 996 0.94
37 57 3.4e-06 0.00028 22.1 2.4 1 23 1017 1039 1017 1039 0.98
38 57 0.0041 0.34 12.4 0.1 2 21 1045 1064 1044 1065 0.94
39 57 3.4e-06 0.00028 22.1 2.4 1 23 1086 1108 1086 1108 0.98
40 57 0.0041 0.34 12.4 0.1 2 21 1114 1133 1113 1134 0.94
41 57 3.4e-06 0.00028 22.1 2.4 1 23 1155 1177 1155 1177 0.98
42 57 0.0041 0.34 12.4 0.1 2 21 1183 1202 1182 1203 0.94
43 57 3.4e-06 0.00028 22.1 2.4 1 23 1224 1246 1224 1246 0.98
44 57 0.0041 0.34 12.4 0.1 2 21 1252 1271 1251 1272 0.94
45 57 3.4e-06 0.00028 22.1 2.4 1 23 1293 1315 1293 1315 0.98
46 57 0.0041 0.34 12.4 0.1 2 21 1321 1340 1320 1341 0.94
47 57 3.4e-06 0.00028 22.1 2.4 1 23 1362 1384 1362 1384 0.98
48 57 0.0041 0.34 12.4 0.1 2 21 1390 1409 1389 1410 0.94
49 57 3.4e-06 0.00028 22.1 2.4 1 23 1431 1453 1431 1453 0.98
50 57 0.0041 0.34 12.4 0.1 2 21 1459 1478 1458 1479 0.94
51 57 3.4e-06 0.00028 22.1 2.4 1 23 1500 1522 1500 1522 0.98
52 57 0.0041 0.34 12.4 0.1 2 21 1528 1547 1527 1548 0.94
53 57 3.4e-06 0.00028 22.1 2.4 1 23 1569 1591 1569 1591 0.98
54 57 0.0041 0.34 12.4 0.1 2 21 1597 1616 1596 1617 0.94
55 57 3.4e-06 0.00028 22.1 2.4 1 23 1638 1660 1638 1660 0.98
56 57 0.007 0.57 11.7 0.2 2 20 1666 1684 1665 1685 0.95
57 57 4.4e-05 0.0036 18.6 1.0 2 23 1685 1706 1684 1706 0.96

Sequence Information

Coding Sequence
ATGGAAACGAGTGAGCCGCTCAAGCCGGGGCAGCTGACCGCCGCGTCGCTCGCTGCCGTGCTCTCGCTGCTCGTCGAGCGCAAGAAGCGCTCGCCGAGCTGCACGCTGTGCGAGCGCCCGTTCTTCCGCAGCGCCGACTACAAGCGGCACCTCATCGAGCACCTGGTGAGGCATGCGTACGCGGCGGATGGTTTCGACGGGCACTTCACGTGCGACATCTGCGGGCTGCAGACCTCCGTGCTAGCCAATTATAAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACCAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTTTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACCAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTATCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACCAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACCAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACCAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACCAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACCAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGGTGAGCACCCAATCATTACCTACTTTACAGCAACACATGCGCGACCACGCCAACCTGCCGCTGTACCAGTGCCTGCTCTGCGACAAGTCCTTCTCGGACTCGTCCAACTTCTCCAAGCACAAGAAGGTGCACGGCATGATGTACATGGAGTGCGACTTGTGCTATCGACGCTTCACAAGCAAGCCCATGCTCGAGCAACATATGGAGTGCCTGCTCTGCGACAAGTCCTTCTCGAACTCATCCGACTTCTCCAAGCACAAGATGGTGCACGGCATGATGTCCATGGAGTCAATACTTCGCTCGGGTCATTGTTATTTTGGACTGATGTCGGGCTGA
Protein Sequence
METSEPLKPGQLTAASLAAVLSLLVERKKRSPSCTLCERPFFRSADYKRHLIEHLVRHAYAADGFDGHFTCDICGLQTSVLANYKQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMEVSTQSLPTLQQHMRDHANLPLYQCLLCDKSFSDSSNFSKHKKVHGMMYMECDLCYRRFTSKPMLEQHMECLLCDKSFSNSSDFSKHKMVHGMMSMESILRSGHCYFGLMSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-