Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_946894085.1
Location
CAMPPJ020000226.1:134961-160291[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-15 4.9e-12 46.7 0.2 3 44 532 573 530 575 0.95

Sequence Information

Coding Sequence
ATGAAAGTGTTCATGGACATGAAGCCGGCGGGTTCACTCTGCACCGTGCTGGCGACAATGTTCCGCTTCAAGTCGGAGCAGCGCTGGCGCAAGTTCGACTTCCAGGTTGGTAAGAACCCATCGCGCAAGGACCTGAACATCCAGATGATGATGGAGATAGAGTCGGCGCTGCTGGAGGCCGAGATCCTGCGGCTGCCGGCCGTGTTCGTGCGGCCCGACGTCGACAAGGCCACCGCCGCCAAGGTCAAGGACATCATCGTCGGCCACCAGGGCGAGATCACAGAAGAAGAAGATGAGGCTACACACATTATATATCCGAGTGTGGACCCACTGGAAGAAGAGTACGCCCGGCCGGTGTTCAAGCGAGGCTCCAACATGCTGCTGCACTGGTACTACATGCCGGACAGCCACGACACCTGGGTCGACACCGACCTGCCTCTGGAGGCGCCCGAGAGCGTGTCGTGGGAGCTAACGCGCGCGGAGCCGTGGCGCGTGGTGGCGACGTGGGCACTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGGTGGACGCTGCCGGCAAGAAGAAGGTGCACAAGCTGCGGCTGTCGGTGGACGACCTGATGCCGGGCGCGGAGCCGGCGACCGCCAAGACCAAGAAGGGCAAGCGGAAGCGCACGCCGTCGCCGTCGCCGGCGCCCAAGCACGGCAAGCGGAAGAGTCGTTCTCTGATGAAGCGCGGGCGCGACGTGGAGGAGGACGAGGAGGAAGACAACGCCTCCCGCGACAACACCGACTCGGCGCCGCCGCCCGACCCCGAGCGCTCCAGTGACACACCGTCGGCGTCGGCGCCGGAGACGCCCGCGCCGCCGAGCACCGCGCCCGCCACCCCCGCGCCCGCCCCGGAAGCGCCCGCCACGCCCGCGCAGCCCCCCGACACCCACGACGACTCGCAGGGCAAGAGCGACACCGACACCCAGGAAATGCTGTCAAAGGAAGAACTGGAGGATAATGTGACGGACCAGACACACCACATCGTGGTGCCGTCCTACTCTGCGTGGTTCGACTACAACTCCATCCACACCATAGAGAAACGCGCCATGCCCGAGTTTTTCAATGGGAAGAATAAGTCTAAGACCCCGGAGATATACCTCGCTTACAGAAACTTCATGATCGACACGTACCGGCTGAACCCGACGGAGTACCTCACGAGCACCGCGTGCCGCCGCAACCTTGCCGGCGATGTGTGTGCCATCATGCGAGTGCACGGCTTCCTTGAGCAGTGGGGCCTCATCAACTACCAGATGGACACGGACGTGCGTCCGACAGCGATGGGACCCCCGCCCACCTCACACTTCCACGTGCTCTCGGACACGCCGTCGGGTCTACAGCCGCTCACGACGAGACCCCCGCACCAGCCACGACCTGTTGAGAATGCTACGGTGCCCAAGCTGGAGGCGGGTCTGCCGAACGGCGCGGGAGGCGAGGCGCCGCCGGTCGCCGCCGCTGCTGCCGAGGTTGCACTTGCGCAGGGCGGAGCATTCGGCCTTAAACTCGATCAGTACCGGCCGCAGGGTGGGCCGGGCGCGACGCGCGGCCGCGAGTGGACCGAGCAGGAGACACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGCAGCACGTGGGCTCGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCGTACCTGCAGGACGCGCCCTCAGGTGGTGTGCTCGGCCCGCTGGCCTATCAGCCGATACCGTTCAGCAAGAGTGGCAACCCGGTCATGAGCACAGTCGCGTTCCTTGCGTCCGTCGTCGACCCGCGCATTGCCAGCCGGGCCGCCAAGGCTGCCATGGAGGAGTTCTCAGCCATCAAGGACGAGGTGCCGGCGGCGATGATGGAGGCGCACGTGAAGGCGGCGGGCGGCGCGGGCGGGGCGGCCGCCGCGCTCGCCGCCACCGGAATCGCGGGCACCGCTCCCGACGCCCCGCCAGGCGACAAGAAAGACGAAGTGAAAGGAGAGCCGATGGAGGTGGAGGAGGGTGCGGGGGCGGTGGGTGCGGGGGGTGCGGCGCGCCCCAAGCAGGAGCCGGCCGACGCAGACGGCAAGGAGGAACTCTCACCAGATACTGTACTCCTAATTGCTACGGTGTCGTGTGGCACAGAAGAGGGCGGCGGCGGCGGAGGCGGCGGGGACGCGAAGCTGCAGGCGGCGGCGGCGGCGGCGCTGGCGGCGGCCGCGGTCAAGGCGAAGCACCTCGCCGGCGTGGAGGAGCGCAAGATCAAGTCGCTGGTTGCGCTGCTCGTCGAGACGCAGATGAAGAAGCTCGAGATCAAGCTGAGGCACTTCGAGGAGCTCGAGGCGACCATGGAGCGGGAGAGGGAAGGGCTGGAGTACCAGCGACAGCAGCTCATCACGGAGCGGCAACAGTTCCACCTGGAGCAGCTGAAAGCGGCAGAATTCCGTGCGCGGCATCAGGCGCACCACAGGCTGCAGCAGGAGGCAGGGGCGCCGGCGGCTCCGGGCGCGGGCGCCGTGCCCGCCGCACCCGCCGCCGACGCGCCGCCCACCGACGCCCCTCTCGCGCCCGCGCCCGCCTTGCACGCGTAG
Protein Sequence
MKVFMDMKPAGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNIQMMMEIESALLEAEILRLPAVFVRPDVDKATAAKVKDIIVGHQGEITEEEDEATHIIYPSVDPLEEEYARPVFKRGSNMLLHWYYMPDSHDTWVDTDLPLEAPESVSWELTRAEPWRVVATWALDLPQYNEWMNEEDYEVDAAGKKKVHKLRLSVDDLMPGAEPATAKTKKGKRKRTPSPSPAPKHGKRKSRSLMKRGRDVEEDEEEDNASRDNTDSAPPPDPERSSDTPSASAPETPAPPSTAPATPAPAPEAPATPAQPPDTHDDSQGKSDTDTQEMLSKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQMDTDVRPTAMGPPPTSHFHVLSDTPSGLQPLTTRPPHQPRPVENATVPKLEAGLPNGAGGEAPPVAAAAAEVALAQGGAFGLKLDQYRPQGGPGATRGREWTEQETLLLLEALELHRDDWNRVAQHVGSRTQDECILHFLRLPIEEPYLQDAPSGGVLGPLAYQPIPFSKSGNPVMSTVAFLASVVDPRIASRAAKAAMEEFSAIKDEVPAAMMEAHVKAAGGAGGAAAALAATGIAGTAPDAPPGDKKDEVKGEPMEVEEGAGAVGAGGAARPKQEPADADGKEELSPDTVLLIATVSCGTEEGGGGGGGGDAKLQAAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARHQAHHRLQQEAGAPAAPGAGAVPAAPAADAPPTDAPLAPAPALHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-