Imas002623.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- NPR2
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000019.1:1863032-1902027[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.038 1.1e+02 3.5 0.0 7 25 169 187 167 187 0.92 2 5 0.047 1.4e+02 3.2 0.0 7 24 220 237 218 238 0.91 3 5 0.047 1.4e+02 3.2 0.0 7 24 271 288 269 289 0.91 4 5 0.047 1.4e+02 3.2 0.0 7 24 322 339 320 340 0.91 5 5 0.047 1.4e+02 3.2 0.0 7 24 373 390 371 391 0.91
Sequence Information
- Coding Sequence
- ATGAACCCAGGCCTCTGGTACGCTAGATGGGAGTTCACCGGCTGCTTCCCCCACAGCGACGCGCAGCTGGCGGCTCTGCCCGCGCAGGCGCTGCCGCGCGACCAACGCGCCGCCATACTCGGCGGCGGCGACAGCGGCGGCGGGGGGGCGGGCCGGGGCGGCGGCGGCGGGGCGGGAGGGGGCGCCCTGCTCGCCATCGAAGTGTACTCGGAGGCGAACCGGCAGCTGCTGGACGCGCTCGCCGCGCGCGTCAAGGCCACCACCTCGGGACTCTGGAAGTTCGTAGACGAATGTATTGCTCTATTGCAGAACCCAGGCGGGGCGAGACAGTTACCTACGCGGCACGTAGGAAATCCAGACGTGTCGGTACCACCCGCTCTTGAGTACTTCCGCTCGAGGGGGTTGAGCGTGACGCGCGACGCCGTCATCCGCGACCGCTGCAAGACGCTGACGGCATGCTACGACTACCTGCGCGGCACGGAGGAGTTTCTGGCGTCGGTTCCGCTCGCGCTGGAATACTTCCGCGCCGGCGGGCTGAGCGTGTCGCAGACGGCGCGCTACGCGACGCGTGACGCCGTCATGCGCGACCGCTGCAAGACGCTGACGGCATGCTACGACTACCTGCGCGGCACGGAGGAGTTTCTGGCGTCGGTTCCGCTCGCGCTGGAATACTTCCGCGCCGGCGGGCTGAGCGTGTCGCAGATGGCGCGCTACGCGACGCGTGACGCCGTCATGCGCGACCGCTGCAAGACGCTGACGGCATGCTACGACTACCTGCGCGGCACGGAGGAGTTTCTGGCGTCGGTTCCGCTCGCGCTGGAATACTTCCGCGCCGGCGGGCTGAGCGTGTCGCAGATGGCGCGCTACGCGACGCGTGACGCCGTCATGCGCGACCGCTGCAAGACGCTGACGGCATGCTACGACTACCTGCGCGGCACGGAGGAGTTTCTGGCGTCGGTTCCGCTCGCGCTGGAATACTTCCGCGCCGGCGGGCTGAGCGTGTCGCAGATGGCGCGCTACGCGACGCGTGACGCCGTCATGCGCGACCGCTGCAAGACGCTGACGGCATGCTACGACTACCTGCGCGGCACGGAGGAGTTTCTGGCGTCGGTTCCGCTCGCGCTGGAATACTTCCGCGCCGGCGGGCTGAGCGTGTCGCAGATGGCGCGCTACGCGACGCGTGACGCCGTCATGCGCGACCACCTACAGGCGGCGCGCCAGTTCGCACTGCTGGAACACCCGACATCACCCCAGATGGGTATCTCGCACCTGCCTCCCGGCCCCGCGGTACGTGACGGTCCGTGTGCTTCCAGCCGCTACCTCGTACTGTCGAACTCGAGCGACGACGTGGGCGCGTCGCGTCGCTACTCCGCCTTCGCCGAGGCGTGCGCTCTCGCCCTGTCGGAGGGGCACGCGACGCTCTGGAAAATCGTAAGGCAAGTTTGGAACCCAAGCGAGTCAGTGGAGCTGGAGATGTGGCGCGCGCGCCGCACGCTCGCCGTCGGCATCGTCATCCTCGCGGTGGTGCTCCTCGTGTCGCCGGTCATCATCCTGCTCGTCCGCAACACCATCAACACCATACAGGTTCCTCGATCTTTGTGTACGTTGAGTCGCAGCAAGTCCGTGAAGCTGGAGATGTGGCGCGCGCGCCGCACGCTCGCCGTCGGCATCATCATCCTCGCGGTGGTCCTCCTCGTGTCGCCGGTCATTATCCTGTTCGTCCGCAACACCATCAACACCATACAGCTGGAGATGTGGTGCGCGCGCCGCACGCTCGCCGTCGGCATCGTCATCCTCGCGGTGGTGCTCCTCGTGTCGCCGGTCATCATCCTGCTCGTCCGCAACACCATCAACACCATACAGGTTCCTCGATCTTTGTGTACGTTGAGTCGCAGCAAGTCCGTGAAGCTGGAGATGTGGCGCGCGCGCCGCACGCTCGCCGTCGGCATCATCATCCTCGCGGTGGTCCTCCTCGTGTCGCCGGTCATTATCCTGTTCGTCCGCAACACCATCAACACCATACAGCTGGAGATGTGGTGCGCGCGCCGCACGCTCGCCGTCGGCATCATCATCCTCGCGGTGGTCCTCCTCGTGTCGCCGGTCATCATCCTGTTCGTCCGCAACACCATCAACACCATACAGCTGGAGATGTGGCGCGCGCGCCGCAAGCTCGCCGTCGGCATCATCATCCTCGCGGTGGTGCTCCTCGTGTCGTCGGTCATCATCCTGTTCGTCCGCAACACCATCAACACCATACAGCTGGAGATGTGGCGCGCGCGCCGCACGCTCGCCGTCGGCATCGTCATCTTCGCGGTGGTGCTCCTCGTGTCGCCGGTCATCATCCTGCTCCAAGTCCGTGGAGCTGGAGATGTGGCGGCGCGCCGCGCGCTCGCCGTCGGCATCGTCATCCTCGCGGTGGTGCTCCTCGTGTCGCCGGTCATCATCCTGCTCGTCCGCAACACCATCAACACCATACAGGTTCCTCGATCTTTGTGTACGTCGAGTTGCAGCAAGACCGTGGAGCTGGAGATGTGGCGCGCGCGCCGCACGCTCGCCGTCGGCATCGTCATCCTCGCGGTGGTGCTCCTCGTGTCGCCGGTCATCATCCTGCTCGTCGGCAACACCATCAACACCATACAGGTTCCTCGATCTTTGTGTACGTTGAGTCGCAGCAAGTCCGTGGAGCTGGAGATGTGGCGCGCGCGCCGCACGCTCGCCGTCGGCATCGTCATCCTCGCGGTGGTGCTCCTCGTGTCGCCGGTCATAATCCTGCTCGTCCGCAACACCATCAACACCATACAAGTTCCTCGATCTTTGTGTACGTTGAGTTACAGCAAGTCCGTGGAGCTGGAGATGTGGCGCGCGCACCGCACGCTCGCCGTCGGCATCGTCATACTCGCGACTTTCACCCGTTCGCTGGAGCTGAGCACCCAGGAGTTGATCGCCGAGAAGCTGAAGAGCGACCAGCTGCTGTCTCGCATGCTGCCGTTGCCGGTGCTCAACCAGCTGCGCGCGCAGCGCAGCGTGCCCGCCGAGGCCTTCGACTCCGTTACCATCTTCTTCAGCGACATCGTCGGATTCACCAACATCTCCGCCACCAGCACCGCCATGGAAGTCATCAACTTGCTTAACATGCTTTACAGGCTCTTCGATAACAGAATTTCAAGATACAACGTTTACAAAGTGGAGACAATTGGCGACGCATACATGGTTGTATCTGGGCTACCCGAGAGGAATGGTAACCGGCACGCGTCGGAGATTGCCGACATGTCATTATATCTTTTGGCGGGCGTACGATCCGCGCGCGTCCCGCACCGCCCGCACGAGCGGCTGCGCGTGCGGGCGGGAGTCAACACTGGCAGCTGCGTCGCCGGCGTGGTCGGGGCCACCATGCCACGCTACTGCCTTTTCGGTGACACTATCAACACGGCCAGCCGCATGGAGAGCACCGGCGAGGCCATGAAAATACACATCTCTCTGAGCACCAAACAGGCTCTGGACGAGATTGGCGGCTACCAGATCGAGTCGCGTGGACTTACTGAGGTTCAGGGAAAAGGCAAGATGGAGACCTTTTGGCTGCTCGGAAAAGTGGGAGAGAGTTACCCGGAAATCGAGCTGTCACCGTGTGCCAATCCGTCCGAGTACCAGTATGACTTTATAGACACATTCATCAGAAATTAA
- Protein Sequence
- MNPGLWYARWEFTGCFPHSDAQLAALPAQALPRDQRAAILGGGDSGGGGAGRGGGGGAGGGALLAIEVYSEANRQLLDALAARVKATTSGLWKFVDECIALLQNPGGARQLPTRHVGNPDVSVPPALEYFRSRGLSVTRDAVIRDRCKTLTACYDYLRGTEEFLASVPLALEYFRAGGLSVSQTARYATRDAVMRDRCKTLTACYDYLRGTEEFLASVPLALEYFRAGGLSVSQMARYATRDAVMRDRCKTLTACYDYLRGTEEFLASVPLALEYFRAGGLSVSQMARYATRDAVMRDRCKTLTACYDYLRGTEEFLASVPLALEYFRAGGLSVSQMARYATRDAVMRDRCKTLTACYDYLRGTEEFLASVPLALEYFRAGGLSVSQMARYATRDAVMRDHLQAARQFALLEHPTSPQMGISHLPPGPAVRDGPCASSRYLVLSNSSDDVGASRRYSAFAEACALALSEGHATLWKIVRQVWNPSESVELEMWRARRTLAVGIVILAVVLLVSPVIILLVRNTINTIQVPRSLCTLSRSKSVKLEMWRARRTLAVGIIILAVVLLVSPVIILFVRNTINTIQLEMWCARRTLAVGIVILAVVLLVSPVIILLVRNTINTIQVPRSLCTLSRSKSVKLEMWRARRTLAVGIIILAVVLLVSPVIILFVRNTINTIQLEMWCARRTLAVGIIILAVVLLVSPVIILFVRNTINTIQLEMWRARRKLAVGIIILAVVLLVSSVIILFVRNTINTIQLEMWRARRTLAVGIVIFAVVLLVSPVIILLQVRGAGDVAARRALAVGIVILAVVLLVSPVIILLVRNTINTIQVPRSLCTSSCSKTVELEMWRARRTLAVGIVILAVVLLVSPVIILLVGNTINTIQVPRSLCTLSRSKSVELEMWRARRTLAVGIVILAVVLLVSPVIILLVRNTINTIQVPRSLCTLSYSKSVELEMWRAHRTLAVGIVILATFTRSLELSTQELIAEKLKSDQLLSRMLPLPVLNQLRAQRSVPAEAFDSVTIFFSDIVGFTNISATSTAMEVINLLNMLYRLFDNRISRYNVYKVETIGDAYMVVSGLPERNGNRHASEIADMSLYLLAGVRSARVPHRPHERLRVRAGVNTGSCVAGVVGATMPRYCLFGDTINTASRMESTGEAMKIHISLSTKQALDEIGGYQIESRGLTEVQGKGKMETFWLLGKVGESYPEIELSPCANPSEYQYDFIDTFIRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -