Imas005628.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- -
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000040.1:156093-164842[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.9 2.3e+04 -3.9 0.1 30 42 15 27 15 28 0.77 2 3 2 5.6e+03 -1.9 0.0 28 36 70 78 70 84 0.81 3 3 8.5e-09 2.5e-05 24.8 0.0 4 37 271 304 268 312 0.86
Sequence Information
- Coding Sequence
- ATGCACCAGTTCACCTCTATCGCTCCGACACAGCTGCACTGTCATAGCACCTTTAGTGCTACGCTTCACCGCAATTACACCGTCACCACCGCTCTACTGCCTCCGCATAGCCACCGCCGCTCAACCGCCACCGTGTCACCGCCGCTCAACCGCAAGTGCACCGTCGCCATCCCTCCATTGCTACCGTGCCGTCAGCACTTCACCACCATCGCAAAGTCAACGCTGCAGCAGCTCATTCAACCGGCCCTCACTGCTCCACCGTCACCGCCGCCTTCGTCATGCTCCTCGGTTGCCCATCACCGCTCGAACGCCACCGCTGCCCCTGTAATTGCTCCGAGGACAGCCCTCATCGCTCCACCGTCAACGCAACCACCGTCGTCACTCCATGCTGAGCACTTTCAACACTGCGGAGATCGCATCGTCGCCATGTTACTGCTGCTACACCCTCACTACTCCACGGCACTACTCCACCGCCGCCGCTCCGCCGCGTCTCTTCCGCTCTCCACACCGAGCGTCTGGTGCCGCCTTACCAATTTCTATGTCGAACACGACTACAAAAGAGAGAGAGATAGAGAGAAGCTGACCTTCGCGGAAGATAAACGACGTGCCAGGCCGGTGCGGGACGCAGATGCTTCTATTGCCACGGTGTGTTCGTTTAATTTGCCCCCCCGCACCGTCCGCACCCCTCCCCTCCGCCCCTCCCCGCATGTGCATGCCGCGCGTGTGTCGCTCCGCGTCGTGTTGAGTCCGCTTGTCTGCCCCGCGACAGGCGAGCTCGCCGAGATCAAGCTCAAGTACTGGCGGCGCGTGCGGCTGCAGGAGGCGATCCGCGCCGTCGTCGGCCAGAAGCTGAGCTTCACGCTCGCCTCGTCGCGCTACCACATCCCCAAGGGAACGCTCTACGACAACATCCTCGGCAAGACGAACAGGATGCGCGCGCTCGAGGAGGCCGGCCTCACGGACGACGAGGAGCGCGCCGTGCTCGAGTTCTGCTGCGCGGCGACGCGCACGCTCAAGCGCCGCTCGCGCCGCGCCCTGCCTGAGGTGCTCGTGTTTGTCGAGAAGCTGGTGCGGGCGCGCCGGCCGAGGTTCGGCTTCGCGGACTTCGTCGCCGGCTACCGCTGGTGGTGGGCGTTCTGCCGGAAGCACGCCATCACCGAGGTGGTCGGCAAGACTGACGCTGCCGCCGCCGCCCCCACCGCCGATAAGTAA
- Protein Sequence
- MHQFTSIAPTQLHCHSTFSATLHRNYTVTTALLPPHSHRRSTATVSPPLNRKCTVAIPPLLPCRQHFTTIAKSTLQQLIQPALTAPPSPPPSSCSSVAHHRSNATAAPVIAPRTALIAPPSTQPPSSLHAEHFQHCGDRIVAMLLLLHPHYSTALLHRRRSAASLPLSTPSVWCRLTNFYVEHDYKRERDREKLTFAEDKRRARPVRDADASIATVCSFNLPPRTVRTPPLRPSPHVHAARVSLRVVLSPLVCPATGELAEIKLKYWRRVRLQEAIRAVVGQKLSFTLASSRYHIPKGTLYDNILGKTNRMRALEEAGLTDDEERAVLEFCCAATRTLKRRSRRALPEVLVFVEKLVRARRPRFGFADFVAGYRWWWAFCRKHAITEVVGKTDAAAAAPTADK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -