Imas031677.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- -
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000367.1:971354-974741[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-14 3.8e-11 43.4 0.4 1 36 16 51 16 57 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGCAAGTACGAGCGCTGCCCCAGCGGGCGGCAAATGTGGAGCGAGGAGGCCATGTCGCTCGCCGTCGCCGCCGTGCTCGCCGGCAAGATGGGCTACAAGATGGCCGCCCGGATCTACCAGATCCCGCGCTCCACGCTGCAGCGGCGCGCGAGCAAGGTGCGCGGCGTCGGCTCACCGCAGCCGCCCAAGCATTCCGCGGGAAACTTCCGCAGGGTCTTCACGGACGAGCAGGAGCGCGACCTCGTCGGCTACATCAAGAGCATGGAGAGCTACCTGATGGGCGTCACGCGGCGCGACATCAGGGAGCTCGCCTTCCAGTACGCGGTCGACAACAACCTCGTGCACCCGTTCGACCTCAACGCCAAGATGGCGGGCGAGGACTGGGTGAGGAACTTCCTGAAGAGGAACCCCGAGCTGACGGCGCCCGGCGACGGCGAGGGCGAGCTGGAGAGGGTGAACTTCGACCAGTTCTACCACTTCATGTCGCGGCATTGA
- Protein Sequence
- MVRKYERCPSGRQMWSEEAMSLAVAAVLAGKMGYKMAARIYQIPRSTLQRRASKVRGVGSPQPPKHSAGNFRRVFTDEQERDLVGYIKSMESYLMGVTRRDIRELAFQYAVDNNLVHPFDLNAKMAGEDWVRNFLKRNPELTAPGDGEGELERVNFDQFYHFMSRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01042625;
- 90% Identity
- -
- 80% Identity
- -