Imas035778.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- -
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000522.1:75822-89658[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-11 3e-08 34.1 0.0 4 39 193 229 190 233 0.89 2 4 1.7e-12 5e-09 36.6 0.2 2 39 245 282 244 285 0.93 3 4 9.3e-15 2.7e-11 43.9 0.0 2 45 300 344 299 344 0.95 4 4 1.7e-18 5e-15 55.8 0.0 1 42 351 393 351 395 0.95
Sequence Information
- Coding Sequence
- ATGCCGGTAGCGATACTTCACACTAGGGGGAGAGGAGCCGGGGGCGGTGGCGGGGAGCGGCGGCGGGGGgagggcagacgtcgtgactgtttgCGATACTTCACACTAGGGGGAGAGGAGCCGGGGGCGGTGGCGGGGAGCGGCGGCGGGGGgagggcagacgtcCGAGTGACCATGGGTGCGCTGGAGACGGAGTTCAGCCCGCCGGTGCCGCTTCCGCCCAGCGCGACGCCGGTGGCGCACGTGAAGCTCGAAACGCGCTCGCCCGAACCGCTCCTGCAGCCGCACGCCTCTGGTGTCAAGCTCGAGAGCCTTGAACTGCACGAACAGGGCACAACTTTAGACATGGACCGGCACATGACAGTGCATGGCCGCACGCCTGGCGGCAGTCTCTCCGCCGTAGACTTCCTACCCTTGCATCCAGTCAAGGACGAGCCGCTGTCAGAAGGAGAACAACAGCTTTTGAGCGGGGAGGATACCAACGATTCAAGCAATGCAGAGTTCCCAAACGCGAGCGGTACGCAGGCTGCAGGCGGCTCTGCGCTGGGCACGGGTCCCAAGACCTGGACGCAGCAGGACATGGACAACGCGCTGGAGGCACTGCGGAGCCATAACATGAGTCTTACTAAGGCGTCGGCGACATATGGCATCCCGTCGACCACTCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACACCCAAGAAGGAGGGCTCCAGCAAGACGTGGAGCGAGGCGGACCTGCACAACGCGCTGCACGCTCTCCGCACTGGTGCCATCTCTGCCAACAAGGCCAGCAAGGCCTACGGAATCCCGAGCAGCACACTGTACAAGATTGCTCGCCGCGAGGGTATTCGGCTGGCGGCGCCGTTCAACGCTGCGCCGACGGCGTGGCGGCCGTCCGACTTGGAGCGAGCGTTGCACTCCATTAGATCGGGGCTCAACTCCGTGCAGCGGGCTTCCACAGAATTTGGCATTCCTACGGGCACGCTGTACGGGCGCTGCAAGCGGGAAGGCATCGAGCTGTCACGCTCCAACCCCACGCCGTGGTCCGAGGACGCCATGGGCGAGGCTCTGGAGGCGGTCCGCGTCGGCCAGATGTCCATCAACCAGGCGGCCATCCACTACAACCTGCCGTACTCGTCCCTGTACGGTCGGTTCAAGCGCTGCAAGTATGAACCAGAGCCGGGAGCGCTGCACCGCCCGCTCGCGCCCGTGCACCACGCCATGCAGAATCCGCAGCCGATGGTGCTGCACCCGCACATGGACTCGCTCGACCCGGAGCAGCCCGACGCGTACGCGCACTACCCGCAGCACGACAACCCGCACCCGCACGAACACCAGCACGAGCACCCGCACCTGCATCCGCAGCCGCACCCGCACGGGTACGCGCACGCCGCCCACTACCCGTACGAGTACGCACAGTACGCGCCGCAGGCCACCAGCTGA
- Protein Sequence
- MPVAILHTRGRGAGGGGGERRRGEGRRRDCLRYFTLGGEEPGAVAGSGGGGRADVRVTMGALETEFSPPVPLPPSATPVAHVKLETRSPEPLLQPHASGVKLESLELHEQGTTLDMDRHMTVHGRTPGGSLSAVDFLPLHPVKDEPLSEGEQQLLSGEDTNDSSNAEFPNASGTQAAGGSALGTGPKTWTQQDMDNALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSSKTWSEADLHNALHALRTGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRPSDLERALHSIRSGLNSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYEPEPGALHRPLAPVHHAMQNPQPMVLHPHMDSLDPEQPDAYAHYPQHDNPHPHEHQHEHPHLHPQPHPHGYAHAAHYPYEYAQYAPQATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -