Basic Information

Gene Symbol
kn
Assembly
GCA_946894085.1
Location
CAMPPJ020000006.1:2004337-2021030[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.9e-145 3.9e-141 472.2 0.0 174 387 19 251 11 254 0.99
2 2 3.1e-07 0.0015 17.8 0.9 422 468 265 315 258 365 0.84

Sequence Information

Coding Sequence
ATGTGTGGAGTGCCTTTCCCCCCCCCCTCACCCTGCCGCTGCCCGCTCCCGCGACCCGCGCCGCCCGTGTTTATTCGTTTGTTTTTCCTGAAATTCTTTCTGAAGTGCAACCAGAACTGCCTCAAGAATGCTGGAAACCCGCGTGATATGAGAAGATTTCAGGTGGTGATCTCGACGCAGGTGGTGGTGGATGGCCCACTGCTTGCCATCTCGGACAACATGTTCGTGCACAACAACAGCAAGCACGGCCGGCGCGCCAAGCGGCTCGACCCCAGCGAAGGTACTGACGCCCTCCCGCCCGCCACCGACCTCTCCGGGCTGTACCCCCCGCTCCCGGTGGCGACGCCTTGCATCAAAGCGATATCGCCAAGTGAAGGATGGACAGCAGGCGGCTCGACGGTCATAATCGTCGGAGACAACTTCTTCGACGGACTCCAAGTTGTGTTCGGGACCATGCTGGTCTGGAGTGAGCTAATAACCTCACACGCCATCCGGGTGCAGACTCCGCCACGGCACATACCTGGTGTAGTAGAAGTGACGTTGTCGTATAAGAGTAAGCAGTTCTGCAAGGGAGCGCCAGGAAGATTCGTTTATGTTTCACTCAACGAACCGACCATAGACTACGGGTTCCAGCGGCTCCAGAAACTAATACCCAGGCATCCCGGGGATCCAGAGAAACTGCCAAAGGAGATCATACTCAAACGGGCGGCGGACCTGGCGGAGGCTCTGTACTCGATGCCTCGCAACAACCAGCTCGGGCTCGGCGGACCGCGCTCGCCCGGCGGCGGAGGCAATATGGCCGGCTTCAACTCGTACACGGGCCAACTGGCTGTCAGCGTGCAAGACGCGGCGGCGGGCCAGTGGACGGACGAAGAGTACGCGCGCAGCGGCGGCGGCGGCTCCGTGTCGCCGCGCTACTGCTCCGCCGCGTCCACGCCTCACGCCGCGCCGCCCGCACCCTCCGCGCCCGCCTACCCTCACCCAGCGCAGCACTACCCCGCGCCGCCCGCCAGCCTCTTCAACACCTCCTCCATCTCGCTCGGTCCATACCACCCTGCCAACTCGTCCGCCCTGAATGGACAGCTATCATCTGACCATCAATACGATACGTATAACGCGCGAGATAGAGGGCATTACAGCGAAAGAAACACCAGGATAAAGCGCCCCAACGAATGTCCAGCAAACACTCATGCAAAATGCACTGACGGCGGCGTCGCGATGAAAGACAACCCTAGAGTGGCAAAGGGGAGAAGAATGAGCGGTCTCGTCTCGTCTCCGTTCAGTATGAACCCTTTCTCGTTACCAACATGCAGTGCTCAGCAGTACGCGGCGCACACAGCGCCCCTAGCCACCAAGTGA
Protein Sequence
MCGVPFPPPSPCRCPLPRPAPPVFIRLFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVVVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDALPPATDLSGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPGGGGNMAGFNSYTGQLAVSVQDAAAGQWTDEEYARSGGGGSVSPRYCSAASTPHAAPPAPSAPAYPHPAQHYPAPPASLFNTSSISLGPYHPANSSALNGQLSSDHQYDTYNARDRGHYSERNTRIKRPNECPANTHAKCTDGGVAMKDNPRVAKGRRMSGLVSSPFSMNPFSLPTCSAQQYAAHTAPLATK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
-
80% Identity
-