Ilum006119.1
Basic Information
- Insect
- Ignelater luminosus
- Gene Symbol
- Sall1
- Assembly
- GCA_011009095.1
- Location
- Ilumi1.2:64435-109140[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 6.9 6.7e+02 1.7 0.2 3 22 577 596 576 599 0.90 2 12 0.0035 0.34 12.1 0.2 1 23 658 681 658 681 0.95 3 12 0.17 16 6.8 0.2 1 23 686 710 686 710 0.91 4 12 0.0098 0.95 10.6 1.3 2 23 730 752 729 752 0.95 5 12 9.1e-06 0.00089 20.2 0.4 1 21 757 777 757 778 0.95 6 12 0.0092 0.9 10.7 3.4 1 23 837 858 837 858 0.95 7 12 0.00013 0.013 16.5 0.3 1 23 864 886 864 886 0.98 8 12 0.00015 0.015 16.3 1.4 1 23 908 930 908 930 0.95 9 12 0.29 28 6.0 0.1 2 23 936 959 935 959 0.94 10 12 0.0031 0.31 12.2 2.2 1 23 965 987 965 987 0.97 11 12 0.00031 0.031 15.3 3.0 1 23 993 1015 993 1015 0.98 12 12 0.00026 0.025 15.6 3.0 1 20 1021 1040 1021 1042 0.95
Sequence Information
- Coding Sequence
- ATGATAGGCGATTTTGACGACGATACTCATTATTGTCTAAAATGCCATTCAACAATTATTGGTTTAGACAACTATGTCAATCACAGAAAATCACGCTGTGGAAAAGATCTAAATAACACCCAAGAGCCAAAACCTGATATAGTATCTCCACAACTGTTACAACCTGAATCTGACGAACCATTTTCTCTAAAAGCAGACGATTTCTTTTCTTCGCTCGAATTACAAAGCAGTGCTAAGAGATTGTCTAACCCTACATCCGGCGGGAAATCTTTCAGTGGTGTTCTAACTAGAAGTAAAGCTTCTGCTGTTATACAAGCCAGCAGTTCTGGAAAGGATTCATATAATTATCTGGAAAGTTCTAAAAATGAAAGTAATGAATGGATGTCAGATCATCATAAAGAAATAGAAAACGATAGTAGTCACAACAGTAGAAATCCAATAAAAAAGGAAGATCCACCAACAATTCAAGTTTACGCTGACAGTGAAGAAGAATCTGACGAATATGACTATGAGGAAGATGATTCCGATTATGAGGATGAAGACGAAAATCATGACGTTCCCCCTAGGTCATTTACAGGGGGGAAATGGAAACCTACATCATCTCCAGTACAATGGTTGAGACCCGGTTCTTCTAATGAAGACAGAGATTGGAATGCACCACCGCCACACTATACAGGTGCTAAATGGAAACCTTCATGGAAACCAACGAAATTAGATAACACACATTTGCAACCGGAGCAATCGGGTGGTAAATGGAAATCGACATCTCCGAAAGAAAATTACGACGTTCCCCCTCCCACATTCACAGGTAGTAAATGGACACCTTCAAAAATGCTTTCAAAAAACGAAGTTTCTGATACAAAAGGAAAATTTAAATCTCGTTCTGATAACAAATGGCAATATGATAATGAACCTCCACCTGAACACACGAAAGGAAAGTGGAAACCAACAGCATTACCTAACAGACATAATGAGACTGAACTTCAAGCATCCTCCTATTCAAAACAGCTTTTAAATAAAAATCACGTAGAGGATAGCACACCTCCTCCTTCATATACAAAAGGTAAATGGAAGCCACCAACTCAAAGTGATAACCCGGAAAGAACTCGTAATGTAGGGAAATGGATGTCTCGTATGCAGTCAGTTTCCACTAAAACGGAAACAGAAGTGTCACCCTTTCGAAAATCAAGTGGAACAGTACAATATTGGTGCGGTCCTTGTAACCGACGCCTGGCGTCGAAAATAGTTTACGAACGTCATTTAAAATCTGAGCTGCATTTTAAACGCACTCTGCACGATCGCGAGTTCGATGACTCATCTTATTTGAATATAAACTTCGTTACAAACAAAAGAACGGCGAGCAAATCAAACGAATATTGCTCACGTACCGATGTTGAAGATACTGAAGACAATAATTCAGACAATAAAACTCCAACGAGTAGTAAAGTTCGTAGAAAGATATTTGTTACTTGTGATGTATGTAAGTCGAGAGTAAATTCACAATTGATGGGGAAACATTTGATATCGCATTACCATTGTCGTAAAGGAGACATAAGCTTACCAGAATCTAGGAAAATGGTACTTGAAAATATACATAGCATAATTTTACAGTCACCCTATCAGTGTAGTCCATGCAAATTTTACTGTAACACACACGAATGGTTTCTACAACATTGGCTTTCGAATGATCATAAGGATATCGTCTTAAATTCACAAAGTTTCTTTTGGTGTTCAGTTTGTAAATTTCAGTCGAAAAACTCGGACCTTATGTACGATCATTTAATTTCAGAAGAACATAACGAAATAATTTCAATGATTAATCGCTCAGTTCCTGTGATAATTAAAAAGATTACGCCTATAAAATGCGTTACTTGCGATCAACAATTTTTATTTAATATCCAGTTAAGAAAACATTGTGAGAAGGAAAACCACTCCCACGGCTTAACTTCTTCAGATGTTTATCAAAGTAAATATAATTGTGACCAATGCGATGCAGTTCTTAAATCTAGAATCGCGCTTCAACGTCATCAAATTTTGAAACACAACAAGAAATTTTATATTTGTTCTGTTTGTTCCTTAAATTTCGAAAATATTACTGAGGCGAAACGTCATCGAAGTACACCTGAGCATCGATGTGCCCTATTGGAAATGCGTCAGAAGCAAGGCTTAGAAAAACCCGTATGCAAAACGTGTCAATATTGCTCGAAAAATTTTGAAAATATAATTAAATTGAAAGAACATCTCAAAGAAAGTCATCCAGAACAAAATCACAGTTGCCCACACTGTGGAAAGGTTTTTACGATTTCTCAAGATCTAACAGTACATATCCGAAACAAAGCATGCAGTTTTGAAGATGGTGAAACCAAAACAAATTCTTGCGACCAGTGTCAATTCAAAACCGATTCCACGTCTGAAATTCTTTTTCATAAGGTTCTTCATGGTGAACCTTACTTAATGTATCCTGAAGATCAAGAAGAGACTTCACTAGAAAAACGTCCAATACCTCAATACAAGTGTCCTATCTGTGAGAAATTCTTTGTGAAATCATCATTGCGTTGCCATTTAAGACTTCACACAAAAGAGAGGCCATTTGTGTGTTCTCTTTGTAATGCTGGGTTTGTGAGAAAGAATAATTGGATGTTGCACATGAGGAATCACGACAAGAAAAATATACGCAAACTGGAAAAGGTTAATCAAAGTGTTGAATATGGAGATCGTCCGTTTTTGTGTTCTACATGTGGGGCAAGCTTCAAGAAAAGGTCTGTGTTGCAACAGCATATGACAAGACACACGGGGAAATCCATCAAGTGCACTCAATCCGGATGTGTATTTTCCGCACGTTTCCCTGCGGAACTAAAGGCTCATTTACTTACCCATTCTGACAACAAACCTTACGCTTGCGAACATTGTTCTTATCGAGGGAAAACCAAACAACAACTTGATAGACACATGACTATTCATGAAGATGCCAAGAAATATCGATGTCCTCAATGTTCGTTTACTTCCCGTTTAGCTTCACATCTTAAAAGACATCTTCGATTACATACAGGCGCAAAACCTTTTGTATGTCCCCACTGTGATTACTGTTGTAATAACTTGGAAAACTTACGTAAACACGTACTGGCAACGAGTAAACATCCTGGAAAATGCATATATGAATGCAAGTTCTGCCAAGGAGATAGTTTCGAAACCAACTTTGCCAAGGACTTCAAAGTTCATTTAGTAACTAAACATCCTGAAACCTTCGTGTCAGGAAGGGAAGCGGCCACTTACGTTGCTGGAATATATGAAGCCGTAAACGACGGTACGTCTGTTCAAGGATTATTGGACGGCGACGATAAAGACAGGAATTCTCAAAAAGTCGTATTACAAGCAGACGAGGCCTTGTCACAGTTTCAGGATGCAATACCAACGTCTACTGCATCTAATAGTAATATAGGATCTGCAGTTTTGCTAACTTCAGTTACAACTCAAGATTCTTCAGAACATAAGATGCAGGATGAACTTTTCCCTATGCTAATTGTATCGAAAGATGTTGTTTGCATAGAAAATCCATCTGAAGCTTGGAATATTGGCGGAAGTTACGACGTCGAGGAGTCTGGTAGCTTAGTGCCTTTTCATTCAGAAGGGGAAACTTTATTTCATGAACATTTTCAGTAG
- Protein Sequence
- MIGDFDDDTHYCLKCHSTIIGLDNYVNHRKSRCGKDLNNTQEPKPDIVSPQLLQPESDEPFSLKADDFFSSLELQSSAKRLSNPTSGGKSFSGVLTRSKASAVIQASSSGKDSYNYLESSKNESNEWMSDHHKEIENDSSHNSRNPIKKEDPPTIQVYADSEEESDEYDYEEDDSDYEDEDENHDVPPRSFTGGKWKPTSSPVQWLRPGSSNEDRDWNAPPPHYTGAKWKPSWKPTKLDNTHLQPEQSGGKWKSTSPKENYDVPPPTFTGSKWTPSKMLSKNEVSDTKGKFKSRSDNKWQYDNEPPPEHTKGKWKPTALPNRHNETELQASSYSKQLLNKNHVEDSTPPPSYTKGKWKPPTQSDNPERTRNVGKWMSRMQSVSTKTETEVSPFRKSSGTVQYWCGPCNRRLASKIVYERHLKSELHFKRTLHDREFDDSSYLNINFVTNKRTASKSNEYCSRTDVEDTEDNNSDNKTPTSSKVRRKIFVTCDVCKSRVNSQLMGKHLISHYHCRKGDISLPESRKMVLENIHSIILQSPYQCSPCKFYCNTHEWFLQHWLSNDHKDIVLNSQSFFWCSVCKFQSKNSDLMYDHLISEEHNEIISMINRSVPVIIKKITPIKCVTCDQQFLFNIQLRKHCEKENHSHGLTSSDVYQSKYNCDQCDAVLKSRIALQRHQILKHNKKFYICSVCSLNFENITEAKRHRSTPEHRCALLEMRQKQGLEKPVCKTCQYCSKNFENIIKLKEHLKESHPEQNHSCPHCGKVFTISQDLTVHIRNKACSFEDGETKTNSCDQCQFKTDSTSEILFHKVLHGEPYLMYPEDQEETSLEKRPIPQYKCPICEKFFVKSSLRCHLRLHTKERPFVCSLCNAGFVRKNNWMLHMRNHDKKNIRKLEKVNQSVEYGDRPFLCSTCGASFKKRSVLQQHMTRHTGKSIKCTQSGCVFSARFPAELKAHLLTHSDNKPYACEHCSYRGKTKQQLDRHMTIHEDAKKYRCPQCSFTSRLASHLKRHLRLHTGAKPFVCPHCDYCCNNLENLRKHVLATSKHPGKCIYECKFCQGDSFETNFAKDFKVHLVTKHPETFVSGREAATYVAGIYEAVNDGTSVQGLLDGDDKDRNSQKVVLQADEALSQFQDAIPTSTASNSNIGSAVLLTSVTTQDSSEHKMQDELFPMLIVSKDVVCIENPSEAWNIGGSYDVEESGSLVPFHSEGETLFHEHFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -