Ilum008316.1
Basic Information
- Insect
- Ignelater luminosus
- Gene Symbol
- -
- Assembly
- GCA_011009095.1
- Location
- Ilumi1.2:229-13647[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.061 6 8.1 0.4 2 20 61 79 60 81 0.92 2 17 4e-06 0.00039 21.3 1.5 2 23 112 133 111 133 0.97 3 17 1.1 1.1e+02 4.2 0.2 1 23 139 162 139 162 0.88 4 17 2.4 2.3e+02 3.1 0.6 2 23 170 193 170 193 0.91 5 17 2.8e-05 0.0027 18.7 1.8 1 20 201 220 201 222 0.93 6 17 0.00012 0.011 16.7 0.9 1 23 230 252 230 252 0.99 7 17 2.5e-06 0.00025 21.9 0.2 2 23 259 280 258 280 0.96 8 17 1.7e-05 0.0017 19.3 0.2 1 23 286 308 286 308 0.95 9 17 0.0078 0.76 11.0 2.2 1 23 314 336 314 336 0.98 10 17 0.0033 0.32 12.1 1.5 2 23 537 558 537 558 0.94 11 17 1.5 1.5e+02 3.8 4.4 1 23 573 596 573 596 0.97 12 17 1.4e-06 0.00014 22.7 1.4 2 23 601 623 600 623 0.96 13 17 0.00053 0.052 14.6 0.9 1 20 633 652 633 654 0.93 14 17 1.6e-05 0.0016 19.4 2.7 1 23 662 684 662 684 0.99 15 17 0.00054 0.053 14.6 1.5 1 23 690 712 690 712 0.95 16 17 0.00021 0.02 15.9 0.6 1 23 718 740 718 740 0.96 17 17 4 3.9e+02 2.4 2.6 3 23 748 768 746 768 0.93
Sequence Information
- Coding Sequence
- ATGGAAGAATTCAATTTAAAAGATGAATATTCAGATTTAAAACCGCAAATCCTATCGCAAGATGAATCTTTTATCACTTCTACAGAATTAGTTTTAAAACAAGAACAAATAAAATCTTCAGTACAATCTGCTGATGTAGCTTTAAAACAAGAACAATGCATAATAGGCAGCCCCGTACTACAATGTAAATATTGCTTTAAAAAATACAAACTGGTAGGAGCTTTAAGAAGTCATGAAAAAGGTTGTGCTCAAAACAAAGCAGTATTGAAGGAAGAAATAAAGAACGAAGAGGTGAATGAAATTAAAAATGCACACGAAGCTAATAATGTTAAAAAATGTAATGAATGTGGACAGACATTTAAGTATGCTAGAACGTTACAAAAGCATCTGCTTATGCATAAGGAAAAAGGTCTGTTTTCATGTAAAATATGCGTGGTAAGCTTTGGCAGTATCGAAGAAAAGGTGATTCATAGAATGAACACGCATCCAACAAAGAACAAGAAAAACAAATGCAAATCGTGCCCCCACTTATCTTTCTCATCAGAAGGAGAATATTTATACCATATCAACGAAGTCCACAAAGGAAGATACGATGATTATTTTATGTGCAGCGAATGTGGAAAACAATTTAAAACTAAAACTGAACTTACTCATCACAACAATTCAAAATGTGGCACCATTCGTCAGTACAAATGCAAAGAATGTGGTCAAGAATTAATGACAGCAGGTTCTTTACACAATCATATGCTTCGTCATAAAGGAGAAAGGTCCAGCATGTGTGGATATTGTGGTAAGAGATTTGTGACTGCAGGACAGTTGAAAGTGCATGAACGTTCTCATACTCAAGAAAAAGCTTTTATTTGCCCCGAATGTGGCAAGGGTTTTTCTTATCGCCAAAGCTTAATAACCCACAGCTCTATACATACCGGTATCAAACCATTTGTGTGTGATAATTGTACACAAGAATTTAGCTGCGTGGGCAATTTAATAAAGCATAGAAAAACCCATGCAGATACTTGTGGAACATTCCCATTAACAACTCATCGAGTTAATCATCCGACAACAAAGACGAGGATTCGATTGAATACACCTAAGAATTCCAAATTAAAAGCAATGGCAAGAGAAAAAGAAAGACAGGAAAAATTAGCTGCTTACAAGGAGAAACTGAAATTAGAAATTTGTGTGCCCAAGAATGAATCTGTGACAACTGTTGTTGATTCCTCCTTAGAACAAAAAAATGAAATAGCTTTGGTTATGTTAAACGATGAATCTATAAATAGAAATGATTTTGAGTGTGAAGACAACAAGAATGAGCTTGTGACGCTTCTTGATCATAAACCATGCATGTCCACTAATTTTGTGGAGTTAAATCTGGGAAGTGAATACTTACCTCTTCAAGATGAGAACGTAAATGAAAGTTCCAATTCTAATTCTGATGAAGAACATGACGCAAATGGAAATTATCAATCTGATAACTGTGATGATGTCTTGAATATTGAGCAAAATGAAAATGAAGAGAAAACAAAATCTTTGAGCAAAGTTAGAAAAAAGAAACCCGATTTGGAAAATGGTATTCCAAAGGAAATCAATAATAAAATCACCAAGGGATACTGTAGGCACTGTGGAAAGATGTACAGCAATATCCGATGGCTATTAAAACATGAAGAACAACACGTACAGAAAATCGGAAAGACTGAAACAAAATCAAAAAATTCTTTCAAATGCAGCTGTTGTAAAATTGGTTTTGAAACACGCGATGAATGTAAGGCTCATCAACAAACTGCTCACGCAGATATTTTAACTTGCCATGATTGTGATAAAGTCTTCTCAAATGTAGATTCGTTACGTTCACATCAAAATATATTTCATAAGGGTGTACCTAAAAAGATATATTTATATATTTGTGATAAATGCGGAATGCAGTTTCGACAGAAAGCTTTTCTTACACATCACGAACAAAATAATTGTGGATCGGAACCAATTTATAAATGTCATATATGTGGTAAAGGCTTTAGTAGTGTTTATACTCGTAGATCTCATTTACGTATACATGATCCAAAGAAGAGATTTTTATGCAAGTTTTGCGGTAAGAATTTTCGTTGGAAAGGACAGCTCAAAATACACGAACGTAGTCACACAGGTGAAAAGCCATTTAAATGTTTATATTGCCCAAAAGCTTTTGCATATCGTGAGAGTTTGCTCACTCACAGTACTATACACACTGGTATTAAACCACACTTGTGTCAGGCATGTGGATCTAGATTTTCATGTATTGGAAATTTAATTAAACATAGAGGAACACATGCGAGCAGCTGTGGAGTGTGGTATTCGAAGAATCAGTAA
- Protein Sequence
- MEEFNLKDEYSDLKPQILSQDESFITSTELVLKQEQIKSSVQSADVALKQEQCIIGSPVLQCKYCFKKYKLVGALRSHEKGCAQNKAVLKEEIKNEEVNEIKNAHEANNVKKCNECGQTFKYARTLQKHLLMHKEKGLFSCKICVVSFGSIEEKVIHRMNTHPTKNKKNKCKSCPHLSFSSEGEYLYHINEVHKGRYDDYFMCSECGKQFKTKTELTHHNNSKCGTIRQYKCKECGQELMTAGSLHNHMLRHKGERSSMCGYCGKRFVTAGQLKVHERSHTQEKAFICPECGKGFSYRQSLITHSSIHTGIKPFVCDNCTQEFSCVGNLIKHRKTHADTCGTFPLTTHRVNHPTTKTRIRLNTPKNSKLKAMAREKERQEKLAAYKEKLKLEICVPKNESVTTVVDSSLEQKNEIALVMLNDESINRNDFECEDNKNELVTLLDHKPCMSTNFVELNLGSEYLPLQDENVNESSNSNSDEEHDANGNYQSDNCDDVLNIEQNENEEKTKSLSKVRKKKPDLENGIPKEINNKITKGYCRHCGKMYSNIRWLLKHEEQHVQKIGKTETKSKNSFKCSCCKIGFETRDECKAHQQTAHADILTCHDCDKVFSNVDSLRSHQNIFHKGVPKKIYLYICDKCGMQFRQKAFLTHHEQNNCGSEPIYKCHICGKGFSSVYTRRSHLRIHDPKKRFLCKFCGKNFRWKGQLKIHERSHTGEKPFKCLYCPKAFAYRESLLTHSTIHTGIKPHLCQACGSRFSCIGNLIKHRGTHASSCGVWYSKNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -