Basic Information

Insect: Ignelater luminosus
Gene Symbol: -
Assembly: GCA_011009095.1
Location: Ilumi1.2:12751-20364[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.029 2.8 9.2 4.5 1 21 125 145 125 146 0.94

2 12 1.5e-05 0.0015 19.5 2.5 2 23 157 178 156 178 0.98

3 12 2.3e-05 0.0022 18.9 1.6 1 23 194 216 194 216 0.98

4 12 0.27 26 6.1 0.9 1 15 247 260 247 268 0.73

5 12 9.7e-07 9.4e-05 23.2 1.0 1 23 274 296 274 296 0.97

6 12 0.00073 0.071 14.2 0.4 1 21 302 322 302 323 0.95

7 12 2.3e-05 0.0022 18.9 1.5 1 23 330 352 330 352 0.98

8 12 5.7e-07 5.6e-05 24.0 2.9 1 23 358 380 358 380 0.98

9 12 0.00068 0.066 14.3 7.4 1 23 386 408 386 408 0.99

10 12 9.1e-06 0.00089 20.2 0.5 1 23 414 436 414 436 0.98

11 12 9.8e-06 0.00096 20.1 0.2 1 23 440 462 440 462 0.98

12 12 5.3e-05 0.0051 17.8 0.1 1 23 470 493 470 493 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.029	2.8	9.2	4.5	1	21	125	145	125	146	0.94
2	12	1.5e-05	0.0015	19.5	2.5	2	23	157	178	156	178	0.98
3	12	2.3e-05	0.0022	18.9	1.6	1	23	194	216	194	216	0.98
4	12	0.27	26	6.1	0.9	1	15	247	260	247	268	0.73
5	12	9.7e-07	9.4e-05	23.2	1.0	1	23	274	296	274	296	0.97
6	12	0.00073	0.071	14.2	0.4	1	21	302	322	302	323	0.95
7	12	2.3e-05	0.0022	18.9	1.5	1	23	330	352	330	352	0.98
8	12	5.7e-07	5.6e-05	24.0	2.9	1	23	358	380	358	380	0.98
9	12	0.00068	0.066	14.3	7.4	1	23	386	408	386	408	0.99
10	12	9.1e-06	0.00089	20.2	0.5	1	23	414	436	414	436	0.98
11	12	9.8e-06	0.00096	20.1	0.2	1	23	440	462	440	462	0.98
12	12	5.3e-05	0.0051	17.8	0.1	1	23	470	493	470	493	0.97

Sequence Information

Coding Sequence: GAACTCAATGAAGATTCAGTAAATACAGACAATAGTCCTATACTTGAAAGTGAGCCAGAAGACATAGAAAATGATGTTAATGATGAATATGATAATGAAAGTAGAGATATCCTAAAAGCAATCAAAAGTACAGAGCTTCTAGATACAGTACAGCAAGAAGAATGTGTTGATAAAAATGGAAGATTATATACACGTCGAGTTGTAAAAATTGAAAAGTTTTGGGATGATAAAGAAACAAAATCTAATAATTCTCTGAATGCCAAAGAGTTGGATAGAACTTTGAAGCAAAATATTGTTACGGAAGGTATAATACTTGAAAATGTTGAAACTGGCAATGATAATTCTGAAGTTAATGAAGAAATCTTGGAGTTCTATCAATGTTCCAAATGTGCTAAAAGATTTGTAACAATAGAACATTATTCTAAACACAAATGTTCTGGTATACCGGAAGAAAATTCTAAATTTAAGAAATGTAAAATATGCAAAGCTTGTTTTGTTAATTCAGAATATCTTGAAACACATATGAAAATCCATAAACGTAAATCATCTACTTCGGTAAGCATAGACCCGAATCCCCCATTTGTTTGTAAAATTTGTAATACTGAATTTGCTACTTATAAATCTCTTCGGTTGCATAAAAGGATGCATGAACCAATAAAGTCCAAAGACATTGAACCTCCAGTTTCTTACGGAATGCTTGGAGAAGAACTTAAAACTGAGGCTGTGCCACGTGAAATGTTTGTTTGTCAAATATGTAATAAACCGTACAATAAAGAATACGAAGAAGCTCATACCAAATTTCACAGTAAAGAACTGGATTTTAATTGTGATATTTGTAATCGTAAGTTTTATACACAAGAGAATTTAACCATGCATATACGTGCTCACTCAGATCAAAAGAAATTTACTTGCTCATATTGTAAGAAGGGTTTTTTGACTAGTGAAAAGTTAGAAGCACATATGTCAAGCAAATGTCAGAAAAGGCAATATGAATGTCAATACTGTGGTAGAAGATTTGCTCGACCTCATGAGAAAGTTAAGCATGAACGAATTCACACTGGTGAAAAGCCACATGTATGTGAAATTTGTGGTAAAGCATTTCGTGTAAGTTACTGCCTAACACTTCATATGCGCACCCACTCTGGTACAAGACCATATAAATGTGATCATTGTGGTAAAAGATTTAAAGCTCATAGTGTGTATAATCATCATCTGTTGACACATTCTGAAGATCGTAAGTATAAATGCCCTTATTGCCCAAAGACTTTCAAAACAGGTGTGCAATTAGCTGGACATAAGAACAGTCATACCAAACCTTTCACGTGTACAGAATGTAATAGACCTTTTGCTTCTTTGTATGCTGTACGAGCTCATATGGAAACACATCAAAGGCAAAATAATTTAAAATATAAATGCTGGATTTGTGGTGCATCGTATGCAAGAGCATTCGCATTACGTGACCACGTTAGAGAACAGCATGTTAGTGATCGTGACAATAATGTTGATGCAGATGCAATAATACTTGAAACTGATGATTACCCAATTACTGAAAATATTGCATCAAATGAACATATACTTGGAGATGCTGATGAAAGTATGTTAATTGATATTGGAGGCGAAGCTGTTGACAATATAGAAATGCCTGATGTGCAAGTAGAATCGGATGCACAAGTCACTACTGATACTTGA
Protein Sequence: ELNEDSVNTDNSPILESEPEDIENDVNDEYDNESRDILKAIKSTELLDTVQQEECVDKNGRLYTRRVVKIEKFWDDKETKSNNSLNAKELDRTLKQNIVTEGIILENVETGNDNSEVNEEILEFYQCSKCAKRFVTIEHYSKHKCSGIPEENSKFKKCKICKACFVNSEYLETHMKIHKRKSSTSVSIDPNPPFVCKICNTEFATYKSLRLHKRMHEPIKSKDIEPPVSYGMLGEELKTEAVPREMFVCQICNKPYNKEYEEAHTKFHSKELDFNCDICNRKFYTQENLTMHIRAHSDQKKFTCSYCKKGFLTSEKLEAHMSSKCQKRQYECQYCGRRFARPHEKVKHERIHTGEKPHVCEICGKAFRVSYCLTLHMRTHSGTRPYKCDHCGKRFKAHSVYNHHLLTHSEDRKYKCPYCPKTFKTGVQLAGHKNSHTKPFTCTECNRPFASLYAVRAHMETHQRQNNLKYKCWICGASYARAFALRDHVREQHVSDRDNNVDADAIILETDDYPITENIASNEHILGDADESMLIDIGGEAVDNIEMPDVQVESDAQVTTDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -