Basic Information

Insect: Ignelater luminosus
Gene Symbol: -
Assembly: GCA_011009095.1
Location: Ilumi1.2:241177-242918[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0064 0.62 11.2 2.9 1 22 214 235 214 238 0.90

2 11 0.0032 0.31 12.2 0.3 3 23 246 265 245 265 0.97

3 11 1.6e-05 0.0016 19.4 3.4 1 23 271 293 271 293 0.98

4 11 6.7e-06 0.00065 20.6 0.2 1 23 299 321 299 321 0.98

5 11 0.0021 0.21 12.7 3.5 1 23 327 349 327 349 0.96

6 11 4.9e-05 0.0048 17.9 2.0 1 23 363 385 363 385 0.99

7 11 4.7e-05 0.0046 17.9 0.2 1 23 390 412 390 412 0.95

8 11 1.4e-06 0.00014 22.7 3.5 1 23 418 440 418 440 0.98

9 11 4.8e-08 4.7e-06 27.3 1.0 1 23 446 468 446 468 0.98

10 11 6e-08 5.9e-06 27.0 0.7 1 23 474 496 474 496 0.98

11 11 8.5e-06 0.00082 20.3 1.0 1 23 502 524 502 524 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0064	0.62	11.2	2.9	1	22	214	235	214	238	0.90
2	11	0.0032	0.31	12.2	0.3	3	23	246	265	245	265	0.97
3	11	1.6e-05	0.0016	19.4	3.4	1	23	271	293	271	293	0.98
4	11	6.7e-06	0.00065	20.6	0.2	1	23	299	321	299	321	0.98
5	11	0.0021	0.21	12.7	3.5	1	23	327	349	327	349	0.96
6	11	4.9e-05	0.0048	17.9	2.0	1	23	363	385	363	385	0.99
7	11	4.7e-05	0.0046	17.9	0.2	1	23	390	412	390	412	0.95
8	11	1.4e-06	0.00014	22.7	3.5	1	23	418	440	418	440	0.98
9	11	4.8e-08	4.7e-06	27.3	1.0	1	23	446	468	446	468	0.98
10	11	6e-08	5.9e-06	27.0	0.7	1	23	474	496	474	496	0.98
11	11	8.5e-06	0.00082	20.3	1.0	1	23	502	524	502	524	0.97

Sequence Information

Coding Sequence: ATGGAATCGACAGAACAGATTTCCTTTGAACTACCACCAGACAAATTATCGATGACAGATTTTAATAAAGCATGTAGAGCTTGCTTGACATCAACAGAAACTGCAAACATATTTGACATAACCTATGAAAACATTAATTTACATGAAATTTTTAAAACTTGCGCTTCAGTTCAGATGGATAAAAACGATAATCTACCGCAGAATATTTGTGAATCTTGTCTAGTACTCTTAATACAGCTGTATGAATTTAAACAGCAATGTCAACGATCTGATCTACTACTACGAATAGTATTAAACCAAGAAACTATAAAGCAGGAAGAAGAGAAAGTGGAAGAACGAATAATAAGTACTGAAGAAGCAAACAATGGTAAGAAGTTCTATACTAAGATTAAAGAAGAAATCATAGAAGACAATAAGGAATTAGATAGTGATGAAATTGCAAACAAACATAAGAAACCAGAGGCAGAATTTATAGAGGGATCAGTGAACAATAATAAGGGATCAACTGTGATGCTGATAGAGGACATACCAAGGAATAATCAGGAAGGAACAAGACACAACAAAAAATTAGATACTCGAGTGTTAACGGGCTCAAAAATTCAATGTGCTCAAAAAAAGGATAAATATACAAGGAAATCATATTTCTGTCAACATTGTAAAGAGATATTTGATTCGTATGATAAGCTCAAGATACATCGGCAACAAGTAAAGCATCCACGATATTTGACTAAGGCATGTCCAGAATGTTCCAAGCCACTTACATCTAAAAGCTGGAAACTACATATGAGAACACATACAAAAGAAAAACCATACACTTGTCAAATATGTCAGAAGCAATTTAGTTTGAAATGTAATTTGCAACGACATGTAATGATACATACTGGCGAAAGGCCTCATAAATGTGAGGTGTGTGGTAAAGGTTTCATTCAAGCTATAGCGCTTCAGGATCACAAGCGCATCCACACAGGAGAAACTCCTTTTGTCTGCAGTTACTGTGGTAAGCGCTTTAGAGTGTCGGCCAAACACAAGACTCATTTACTTCGCCATTTAATTGAAAACGGGAATACCGCTAATCCAAATGGATCCTTTAAATGTAATGTATGCAATCGCTTTCTTATAAGCAGAAAAACATTGAATACTCACATGCTGACGCATGGGGAAAAAAGATTTTTATGTAGTTGGTGCGGTAAAGGTTTTGTCACTAAAGCAGGATTAAATTCTCATAGTAAAGTTCACACAGGCATTAAACCATACTCCTGTACTAAATGTAACAAAACCTTTTCACAGCAAGGAAGTTTAAAATCTCATACGTACACACATACAGGAGAGAAGCCATTTGTCTGCAAACTATGTCCAAAGGCTTTTGCTCAACCAAATCATCTTAAGGAGCATATGAGAACACACAGTGGTGAAAGACCATACAACTGTACATATTGTGATAAATCATTTGCATTGAAAGGAAACTTGACCATACATATTCGAACACACACAGGAGAAACTCCATTCATATGTGATATTTGTAATAGGGGTTTTTATGATTCCAGTAGCATGAAGAAACATAGACGAGGGCATGGACAAAGGAATGCTAATAGCACAGTTATAAATAAATCATAA
Protein Sequence: MESTEQISFELPPDKLSMTDFNKACRACLTSTETANIFDITYENINLHEIFKTCASVQMDKNDNLPQNICESCLVLLIQLYEFKQQCQRSDLLLRIVLNQETIKQEEEKVEERIISTEEANNGKKFYTKIKEEIIEDNKELDSDEIANKHKKPEAEFIEGSVNNNKGSTVMLIEDIPRNNQEGTRHNKKLDTRVLTGSKIQCAQKKDKYTRKSYFCQHCKEIFDSYDKLKIHRQQVKHPRYLTKACPECSKPLTSKSWKLHMRTHTKEKPYTCQICQKQFSLKCNLQRHVMIHTGERPHKCEVCGKGFIQAIALQDHKRIHTGETPFVCSYCGKRFRVSAKHKTHLLRHLIENGNTANPNGSFKCNVCNRFLISRKTLNTHMLTHGEKRFLCSWCGKGFVTKAGLNSHSKVHTGIKPYSCTKCNKTFSQQGSLKSHTYTHTGEKPFVCKLCPKAFAQPNHLKEHMRTHSGERPYNCTYCDKSFALKGNLTIHIRTHTGETPFICDICNRGFYDSSSMKKHRRGHGQRNANSTVINKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -