Basic Information

Insect: Ignelater luminosus
Gene Symbol: -
Assembly: GCA_011009095.1
Location: Ilumi1.2:148108-151383[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0087 0.85 10.8 2.2 1 23 12 34 12 34 0.94

2 18 0.00012 0.011 16.7 3.7 1 23 40 63 40 63 0.98

3 18 0.00065 0.063 14.4 5.0 1 23 75 97 75 98 0.94

4 18 0.0056 0.54 11.4 1.0 3 23 109 129 108 129 0.99

5 18 3.4e-06 0.00033 21.5 2.8 1 23 135 157 135 157 0.98

6 18 3.6e-06 0.00036 21.4 0.4 1 23 163 185 163 185 0.99

7 18 0.0018 0.18 13.0 0.3 1 22 191 212 191 212 0.97

8 18 2.4e-05 0.0023 18.9 0.9 1 23 272 295 272 295 0.97

9 18 0.00047 0.046 14.8 0.8 1 21 307 327 307 328 0.93

10 18 0.003 0.29 12.3 0.2 3 23 350 370 348 370 0.95

11 18 0.21 21 6.4 7.4 1 23 376 398 376 398 0.98

12 18 0.0043 0.41 11.8 2.9 1 23 404 426 404 426 0.95

13 18 0.00017 0.017 16.2 2.5 1 23 432 455 432 455 0.98

14 18 0.00025 0.024 15.7 4.6 1 23 467 489 467 490 0.95

15 18 0.0018 0.18 12.9 1.6 3 23 501 521 500 521 0.99

16 18 8.8e-07 8.6e-05 23.4 1.9 1 23 527 549 527 549 0.98

17 18 1.7e-05 0.0017 19.3 0.5 1 23 555 577 555 577 0.99

18 18 0.0022 0.22 12.7 0.3 1 22 583 604 583 604 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0087	0.85	10.8	2.2	1	23	12	34	12	34	0.94
2	18	0.00012	0.011	16.7	3.7	1	23	40	63	40	63	0.98
3	18	0.00065	0.063	14.4	5.0	1	23	75	97	75	98	0.94
4	18	0.0056	0.54	11.4	1.0	3	23	109	129	108	129	0.99
5	18	3.4e-06	0.00033	21.5	2.8	1	23	135	157	135	157	0.98
6	18	3.6e-06	0.00036	21.4	0.4	1	23	163	185	163	185	0.99
7	18	0.0018	0.18	13.0	0.3	1	22	191	212	191	212	0.97
8	18	2.4e-05	0.0023	18.9	0.9	1	23	272	295	272	295	0.97
9	18	0.00047	0.046	14.8	0.8	1	21	307	327	307	328	0.93
10	18	0.003	0.29	12.3	0.2	3	23	350	370	348	370	0.95
11	18	0.21	21	6.4	7.4	1	23	376	398	376	398	0.98
12	18	0.0043	0.41	11.8	2.9	1	23	404	426	404	426	0.95
13	18	0.00017	0.017	16.2	2.5	1	23	432	455	432	455	0.98
14	18	0.00025	0.024	15.7	4.6	1	23	467	489	467	490	0.95
15	18	0.0018	0.18	12.9	1.6	3	23	501	521	500	521	0.99
16	18	8.8e-07	8.6e-05	23.4	1.9	1	23	527	549	527	549	0.98
17	18	1.7e-05	0.0017	19.3	0.5	1	23	555	577	555	577	0.99
18	18	0.0022	0.22	12.7	0.3	1	22	583	604	583	604	0.97

Sequence Information

Coding Sequence: ATGCATGTCCGGGCTCATGAAGGTTCTACAAAACACAAGTGTGAAATTTGCAATAAAGCATTTATAGTGAGTACACATGCAGCTGAACATAAAAATTTCCACACTGGGGAAAAACCATTTCAGTGTGAAATATGTGGCAAACATTTTATGTTCTCTCGGTTTCTAAGTTCTCATCGTAGAACTGTACATTGGGAAATAGTAACAGGCACACCATTAGTGAAATATGATTGTACTATATGTAACAAGCATTATGTTTCCTCTACAGGGCTGAAACGTCATAAATTATATCATCATAATGAAGAAGGAATTGATATGTCTGTATTGTGCGATATTTGTGGTAAACAATTGGCTAGTAAAGAAAAATTAAAATTTCATAGACGTACACATACCGGTTATAAGCCATTTACATGTAAATATTGTTCAAAAACGTTCTCAAGGAAAGAAATGATGAAAGTACACGAACGAGTACATACAGGACAAAAACCATATGTTTGTAAATATTGTGGAAAGGGTTTAACACAGATATCATCACTTAGGATACATGAAAGGACACATACTGGTGAGAGACCTTATACTTGTCGTTTATGTAAAAAAGGGTTCGTTTCTAAAGCTGCTATGGATATGCACATGAAAACTTGTAATGGAGTTTATGTTAAGAAGAAGGTTAAAAAATTTCATTATGAAGAAAAGCCTACACTTACATTTGATCCTTTCATAACCGCAAAACCCAAAAAGAAAGAAACTTTTAAAAAAGGAAAGAGTAAGAATTCAATTAAAAAGGAAAATAAAGGTGATGACACTGAAGAAAAGCCCTTTAAGTGTGACATATGTGGCAAACATTTTGCATTACCTGGACTTCTCTATAGCCACCGTCGGTATGTGCATTGGGAAATTGTGACTGGAACACCACTTGTAAAATATGATTGTGACATCTGTAACAAACATTATGCCTCAGCAAAAGGACTAAAAAAGCACAAGTTAAAAAATCAATGTAAAGTTAATAATGAAGAATCAGAAAATGAAAAAAATAAAATTAAAAAAGTTCATTGTGATGTTTGCGATACAACATTTGAAGATAACGTTTCTTTTGCACTTCATCTGATAGAACATAGTTCTGATGGTAAATACTCCTGTCATATGTGTGATTTTACACATTCATCTAAGTATCACTTCGAAATGCATGTTCGGGCTCATGAAGGTTCTACAAAACATAAATGTGAAATTTGCAATAAAGCCTTTACAGTAAGCACGCATGCAGCTGAACATAAAAATTTCCACACGGGAGAAAAGCCATTTCAATGTGAAATATGTGGCAAGCATTTTATGTTCTCTTGGTTTCTCAGCTCTCATCGCAGAAGTGTACATTGGGAAATAGTAACAGGCACACCATTAGTGAAATATGATTGTACGATATGTAACAAGCATTATGTCTCATCTACAGGATTGAAACGCCACAGATTGAATCACCACAATGAAGAAGGAATTGATATGTCTGTATTGTGCGATATTTGTGGCAAACGATTATCTAGCAATGAGAAATTAAAATTCCACAGACGCACACATACTGGTTACAAGCCATTTACATGTAAATACTGTCCAAAAACGTTCTCGAGAAAAGAAATGATGAAAGTGCATGAACGAGTACATACAGGGCAAAAGCCATACGTTTGTAAATTTTGTGGAAAAGGTTTAACTCAGATATCATCACTTAGGATACATGAAAGAACACATACTGGTGAAAGACCTTATACGTGTCGTTTATGTAAAAAAGGGTTTATTTCTAAAGCTGCTATGGATATGCACATGAAAACTTGTAATTGA
Protein Sequence: MHVRAHEGSTKHKCEICNKAFIVSTHAAEHKNFHTGEKPFQCEICGKHFMFSRFLSSHRRTVHWEIVTGTPLVKYDCTICNKHYVSSTGLKRHKLYHHNEEGIDMSVLCDICGKQLASKEKLKFHRRTHTGYKPFTCKYCSKTFSRKEMMKVHERVHTGQKPYVCKYCGKGLTQISSLRIHERTHTGERPYTCRLCKKGFVSKAAMDMHMKTCNGVYVKKKVKKFHYEEKPTLTFDPFITAKPKKKETFKKGKSKNSIKKENKGDDTEEKPFKCDICGKHFALPGLLYSHRRYVHWEIVTGTPLVKYDCDICNKHYASAKGLKKHKLKNQCKVNNEESENEKNKIKKVHCDVCDTTFEDNVSFALHLIEHSSDGKYSCHMCDFTHSSKYHFEMHVRAHEGSTKHKCEICNKAFTVSTHAAEHKNFHTGEKPFQCEICGKHFMFSWFLSSHRRSVHWEIVTGTPLVKYDCTICNKHYVSSTGLKRHRLNHHNEEGIDMSVLCDICGKRLSSNEKLKFHRRTHTGYKPFTCKYCPKTFSRKEMMKVHERVHTGQKPYVCKFCGKGLTQISSLRIHERTHTGERPYTCRLCKKGFISKAAMDMHMKTCN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -