Basic Information

Insect: Ignelater luminosus
Gene Symbol: -
Assembly: GCA_011009095.1
Location: Ilumi1.2:44184-46238[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.2e-06 0.0006 20.7 2.0 1 23 172 194 172 194 0.97

2 12 5.8e-07 5.7e-05 23.9 0.3 1 23 200 222 200 222 0.98

3 12 0.0075 0.73 11.0 0.8 2 23 259 280 258 280 0.95

4 12 4.1e-06 0.0004 21.3 3.3 2 23 292 313 291 313 0.97

5 12 5.9e-06 0.00058 20.8 0.2 1 23 319 341 319 341 0.97

6 12 1.7e-07 1.7e-05 25.6 1.8 1 23 347 369 347 369 0.98

7 12 4e-06 0.00038 21.3 0.4 1 23 375 397 375 397 0.95

8 12 0.00024 0.023 15.7 2.3 3 23 405 425 403 425 0.96

9 12 3.5e-07 3.5e-05 24.6 2.0 1 23 431 453 431 453 0.98

10 12 8.4e-05 0.0082 17.1 0.8 1 23 459 481 459 481 0.99

11 12 2e-06 0.00019 22.3 1.1 1 23 487 509 487 509 0.98

12 12 6.2e-07 6.1e-05 23.8 0.9 1 23 515 537 515 537 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.2e-06	0.0006	20.7	2.0	1	23	172	194	172	194	0.97
2	12	5.8e-07	5.7e-05	23.9	0.3	1	23	200	222	200	222	0.98
3	12	0.0075	0.73	11.0	0.8	2	23	259	280	258	280	0.95
4	12	4.1e-06	0.0004	21.3	3.3	2	23	292	313	291	313	0.97
5	12	5.9e-06	0.00058	20.8	0.2	1	23	319	341	319	341	0.97
6	12	1.7e-07	1.7e-05	25.6	1.8	1	23	347	369	347	369	0.98
7	12	4e-06	0.00038	21.3	0.4	1	23	375	397	375	397	0.95
8	12	0.00024	0.023	15.7	2.3	3	23	405	425	403	425	0.96
9	12	3.5e-07	3.5e-05	24.6	2.0	1	23	431	453	431	453	0.98
10	12	8.4e-05	0.0082	17.1	0.8	1	23	459	481	459	481	0.99
11	12	2e-06	0.00019	22.3	1.1	1	23	487	509	487	509	0.98
12	12	6.2e-07	6.1e-05	23.8	0.9	1	23	515	537	515	537	0.98

Sequence Information

Coding Sequence: ATGGAAGAAACTTCGCTGACTAACGTGTGTCGAGCTTGTTTGACTGAAGAAGGTGAATTTCAAAGTGTTTTTGTAGCGGACGAAAGTAGTGGCTTAACAATACATCTAGCTGAAATGATAATGGCGTATGCGTCTGTACAGATAACATTAGGAGATGGATTACCTGAGCAGATTTGTATACCCTGTGCTCAAAAAGCGGTGCATATGTATTTATTCAAACAACGTTGTGAAGAATCTGATGCTGCATTACGACAACAATTGGGGAAATCGCCTTTAAATAAGATGTATAGCATAGCAGAAGAACAACGACTAGCTGTTGAAGCTCTTAATGGTATCGATCCTTATTCAATTAATGTTATTATAAAACCAGAAGTTAGTATAGATAATGAGAGCGATCAAAAACAATTGGAATGTGTAGAAGAAATGGGCGAGAATGATTTTGGTGATGTATTCGATCAAACTGACAATGATATAGAAGCAGAATTTTTGGAAACCAAGACTAAAATAGATACATATGCGTGTGATGTGTGTCAGAAAATCTTTAACCGTGTTAGTCATTTAAATCGTCATAAGAAAATTCATGAAGAACACAAACAGTATCCATGTAGCACGTGTAACAAGGCATTTACTAGAAATGATTTACTCTTACGTCATCAAGCAGTACATAATGTAAAATCTGAAGGACATATTTCACCTTTTGAAAATGTATTAGGTCAAGAAATAATTGTTGATAGCCTAATTGAAATAAAATCGGAAGAGGTAATTGAAGATTTGAAATGTTTACAATGTAACAAATTATTTGTAAGCAAGGAGGAATTTAGTTCTCATACAATTGAACATTCAACTAGACCGAGAAATACAAGTGGATCATTAAAATGTTCAGAATGTAATAAAAAGTTCACTAAGGGAGCACATCTAACTAGACATATGAAAATACATGCAGCTATAAAACCACATGTTTGTGAATTGTGTAACAAAGGTTTTGCGCGAGCTGAACAACTTGTAAATCATATGAATGCACATTCAGGAATTAAGCCACACGTGTGTAATATTTGTCAAAAAGGATTTAATCAAGTTTCAAACTTGAAAGATCATATGAGAACTCATAATGGAGAAAAACCATTTTTATGCTCAATTTGTGGAAAAGGATTTAATCAATTAGGAAATCTACGTCAACATACTATAAGACACAGTGGAATTAAAGCGCATTTATGCAGTACTTGTGGAAATGGGTTTGCCAGTAAAGGAGAACTTTGTGCTCATCTTCGAAAACACACAGGTGCAAGACCATTTGTGTGTCCAATTTGTAATCATGGTTTCACAACTTCAAGTTCTTTAACGAAACACAAACGTATTCATTCTGGTGAAAAACCATATGAGTGTGAAGTATGTAAAATGAAATTTTCTCGTTCAGGTATACTCGCACGCCATAAGCGTACTCATACTGGAGAAAAGCCGTACGTTTGTAAATTTTGTACTAAAGCATTTTCACAATCAAATGATCTCAGTTCGCATTTGCGTATACATACTGGAGAAAAACCATACATTTGTGATACGTGTGGACAAGCATTTCGACAGAGTTCAGCTCTTAAAACTCACAAAAAGACTCATATTGATCGTGCTTCTATTCTGGAAATCGAACGTGCAAGAAATCTTGTACCTATGATTCACAGTACCTTTCTAAATGCAACACTGCCGTGA
Protein Sequence: MEETSLTNVCRACLTEEGEFQSVFVADESSGLTIHLAEMIMAYASVQITLGDGLPEQICIPCAQKAVHMYLFKQRCEESDAALRQQLGKSPLNKMYSIAEEQRLAVEALNGIDPYSINVIIKPEVSIDNESDQKQLECVEEMGENDFGDVFDQTDNDIEAEFLETKTKIDTYACDVCQKIFNRVSHLNRHKKIHEEHKQYPCSTCNKAFTRNDLLLRHQAVHNVKSEGHISPFENVLGQEIIVDSLIEIKSEEVIEDLKCLQCNKLFVSKEEFSSHTIEHSTRPRNTSGSLKCSECNKKFTKGAHLTRHMKIHAAIKPHVCELCNKGFARAEQLVNHMNAHSGIKPHVCNICQKGFNQVSNLKDHMRTHNGEKPFLCSICGKGFNQLGNLRQHTIRHSGIKAHLCSTCGNGFASKGELCAHLRKHTGARPFVCPICNHGFTTSSSLTKHKRIHSGEKPYECEVCKMKFSRSGILARHKRTHTGEKPYVCKFCTKAFSQSNDLSSHLRIHTGEKPYICDTCGQAFRQSSALKTHKKTHIDRASILEIERARNLVPMIHSTFLNATLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00978617;
90% Identity: -
80% Identity: -