Ilum017044.1
Basic Information
- Insect
- Ignelater luminosus
- Gene Symbol
- -
- Assembly
- GCA_011009095.1
- Location
- Ilumi1.2:13127-14334[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-06 0.001 19.4 0.0 3 37 16 50 14 54 0.92 2 2 0.28 48 4.4 0.1 11 25 52 65 50 68 0.85
Sequence Information
- Coding Sequence
- ATGTCAAGATACAAAAAAGAAAATGACCAACAGTCTTGGAGCAGTGATGACATGGCTAGTGCGTTAAAGGCCATGTTAGACGAGAAAATTGGGTACTATAAAGAATCTACAAGATTTAATGTGCCACAAACAACTTTAGAAAATAGAATGGAAAAGGTGAAATCTGGAATGTCTGTCGAAGAAGCTAGTCGGAAAGGAGGTCTTGGGCGGTATAAACCTGTTATTATCTGCAATGAAGAAAAAGAACTAGTGAATCATGTTCTTTTTCTGGAATCCAGAGTTTTTGGTCCAACAACTACGGAGTTGGGTCAATTGGCATTATTTGGAAAACCATATGTAAAGGCGGCGACAATAGAAACTGCCTTAAATGGATTTAGAAAAATTAAATAG
- Protein Sequence
- MSRYKKENDQQSWSSDDMASALKAMLDEKIGYYKESTRFNVPQTTLENRMEKVKSGMSVEEASRKGGLGRYKPVIICNEEKELVNHVLFLESRVFGPTTTELGQLALFGKPYVKAATIETALNGFRKIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -