Ilum008518.1
Basic Information
- Insect
- Ignelater luminosus
- Gene Symbol
- -
- Assembly
- GCA_011009095.1
- Location
- Ilumi1.2:53812-55104[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-07 5.7e-05 23.3 0.0 1 41 12 52 12 54 0.89 2 2 9.3 1.6e+03 -0.5 0.0 35 44 141 150 139 150 0.85
Sequence Information
- Coding Sequence
- ATGAGTGCATGTTTTAGAAAATACGTGGATTACACTCCTGAAACCCTGAAACAATTTTTGGCAGCTATTAAAAGCGGAATGAGACAAAGAGTGGCAGCAGAAGCGTATAACATACCTAGACGGACATTAAATAATAAATTAAAACAAAAACATGCCCAAAAACCAGGATATCCTCCGGTCTTTACTGCCGACGAAGAGGCTTCTTTTGTATCCTGCATTTACTTAGTCAGTACATTCGGATTTCCGGTGGATGAATTTGAACTGCAATGCGATATTCAAGCGTACTTACGTCGACAGGACAGAAAACCAAGAAAGAAAAAGCGTCTTCAAGTTGAGGCAGGAAAAAGTATTGCACACGAAGATTTAGAACACCCTTCAACAAGTGAATCTAATGACACCAATGGCGAGAAGCAAGAAATCCGTTGTGTAAGACGTCACCCCCAACTCAGCTGA
- Protein Sequence
- MSACFRKYVDYTPETLKQFLAAIKSGMRQRVAAEAYNIPRRTLNNKLKQKHAQKPGYPPVFTADEEASFVSCIYLVSTFGFPVDEFELQCDIQAYLRRQDRKPRKKKRLQVEAGKSIAHEDLEHPSTSESNDTNGEKQEIRCVRRHPQLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -