Ilum017002.1
Basic Information
- Insect
- Ignelater luminosus
- Gene Symbol
- -
- Assembly
- GCA_011009095.1
- Location
- Ilumi1.2:8261-9901[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-07 5.9e-05 23.3 0.0 5 41 25 60 23 63 0.93 2 2 9.2 1.6e+03 -0.5 0.0 7 15 309 318 308 321 0.81
Sequence Information
- Coding Sequence
- TGTGTTATTATACAGATCATGGTACGTAATTACATCCGAAAGACAAAAAGACAAACGTGGGACGCAAATGTAATGCAGACTGCTTTGAACGAAATAGCAAATGGAATGCCTTTCAAAAGAGCATCTAAAATATTTAATTTGCCTCTGACTACTTTAAAACGTAGGGCGAAAGGACAAAATAAACTAGCAAAGGGCAATTCTAAGCATTTAGGTAGATGTATCTCAACGCTGCCTGAAGAAATAGAAACATCTCTTAAAAATTACGCATTGGAAATGGAAGATCGTCTTTTTGGCCTTACTAAAAAAGATATATGCAAAATGGCATATCAACTTGCCGAAAGGAACGGCATTCAACATAAATTTTCCAGAGATAAAAAAGCTGCTGGTACTGCTTGGTTTAAAGAATTTCTTCGTAGAAATCCCGAACTTTCATTTAGAACTCCGGAAGCCACTTCAGCTGCTCGAGCTCGTGGGTTTAATAAAGAAGCAGTGGCAAAATTTTTTTATACTTTGGAGGAAATAATGAGAGTTCATAATATTACTGATCCCATGCGAATTTATAACATGGATGAATCCGGTATTCAAACAGTTCCCAGCAAAGTGTCTAAAATAGTAGCGCACAAAGGCCGTAAGCAAGTAGGATTCTTAACCAGCGCCGAAAGAGGGCAAAATATTAGTATTGTTCTATGCCTAAATGCGACAGGGCAGTTTATTCCGCCTGCAATAATATTTCCGCGTAAACGCCATAATGATCTTCTTTATCAAGGACTACCCTACGGAACACTTTGTTTACATAATGAATCGGGATATATGAAATCAGATACGTTTGTCAAATTCTTGGAACATTTTCAAAAACATTGCCAGAGCTCAGTCGACAAAAAAGTCCTTTTAATACTTGATGGGCATGTCACGCATCAAACTGTGGAAGCTATTGAATACTGCAGATCCAATGGAATAATAATGTTATCGTTTCCACCTCATTGCACTCATGAGATGCAACCATTGGATGTGGCTGTATTTTCACCCTTAATGACGTATTACAATGAAGAGCTTAATTTGTGGTTAAAAGCTAATCCCGGAAAAATTGTAACTCTGTATAACGTAGGTCCTCTATTTGGAAAAGCATATAGAAGAGCTGCTACGCTAAATAATGGACTAAGCGGCTTTGAAAAGACTGGCATATTTCCCTATAATCCCAATATTCTTCCTGATTGGAAATTTAAGCCATCCTGCACTACCGATAGACCCATGGTAGCTTCAACTGATCATACTATGACTACCTCAAACGGTGACCCACTGCCAACAACAAATTGCGAGAAGAATGCTGAATCCCAAAGAGAAGAAACACCATCTTCACAATTACAAAAACCTGGGCACTCAACAATGAAATCAAAAAAGAATTTTGTGAAAGCAAAATATGAAACATCTTCTAGTGAAACAGATGAATGGCAAGCTAGTGGAAATTCGTCCGATGATGTCAGCATTTTTGATGAAAATGAAAGTTCCGTGTCTATTGTATCCCCTTCACAGAATAATCTTAATGAAAACAAAAAAAATTGTGACACCGTTTGA
- Protein Sequence
- CVIIQIMVRNYIRKTKRQTWDANVMQTALNEIANGMPFKRASKIFNLPLTTLKRRAKGQNKLAKGNSKHLGRCISTLPEEIETSLKNYALEMEDRLFGLTKKDICKMAYQLAERNGIQHKFSRDKKAAGTAWFKEFLRRNPELSFRTPEATSAARARGFNKEAVAKFFYTLEEIMRVHNITDPMRIYNMDESGIQTVPSKVSKIVAHKGRKQVGFLTSAERGQNISIVLCLNATGQFIPPAIIFPRKRHNDLLYQGLPYGTLCLHNESGYMKSDTFVKFLEHFQKHCQSSVDKKVLLILDGHVTHQTVEAIEYCRSNGIIMLSFPPHCTHEMQPLDVAVFSPLMTYYNEELNLWLKANPGKIVTLYNVGPLFGKAYRRAATLNNGLSGFEKTGIFPYNPNILPDWKFKPSCTTDRPMVASTDHTMTTSNGDPLPTTNCEKNAESQREETPSSQLQKPGHSTMKSKKNFVKAKYETSSSETDEWQASGNSSDDVSIFDENESSVSIVSPSQNNLNENKKNCDTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00838409;
- 90% Identity
- iTF_00838417;
- 80% Identity
- iTF_00838411; iTF_00838415;