Ilum002507.1
Basic Information
- Insect
- Ignelater luminosus
- Gene Symbol
- -
- Assembly
- GCA_011009095.1
- Location
- Ilumi1.2:148362-148789[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-11 1.5e-08 34.8 0.0 1 35 33 68 33 73 0.93
Sequence Information
- Coding Sequence
- GCCAAGTTGTTAGAGTCCTCTCACGCTTGGCTCGGCGCCTCCACATCATCGATAGCCGAGTACCCCAACTTACTAAAACTTAAAACTCCAACCTGGACTCAAGATCAACTAAAAGAAGCAATCGACGCTGTAGTGAAACAGAAAATGCGTTTCACTCAGGCATCTTCACGTTACGGAATTCCCAAAGGAACGCTTTATGATAATATTCTCGGGAAATCTAAGCGCATGGCTGTCCTCGAGGAAGCAGGTTTGACGTCTACCGAAGAAGCGGCTGTTTTAGAATTTTGTTGTGACGTTTCCATTTCGCCCTATAACAGACGCACGAAAAAATCGCTCCAGTCAATTTTAGCTTTTGTCGAAAAAATCAGAAGGACCCGCGATCCGGAATTCATGTTCACCGGATTGTCGGGATTTAGATGGTGGTGGGCGTTTTGTAAAAAGCACAGCATCGTTTCTCTATTTTACGATAACGGAGCGAATAATTAA
- Protein Sequence
- AKLLESSHAWLGASTSSIAEYPNLLKLKTPTWTQDQLKEAIDAVVKQKMRFTQASSRYGIPKGTLYDNILGKSKRMAVLEEAGLTSTEEAAVLEFCCDVSISPYNRRTKKSLQSILAFVEKIRRTRDPEFMFTGLSGFRWWWAFCKKHSIVSLFYDNGANN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00813638; iTF_00987054; iTF_01446439; iTF_00807569; iTF_01291442; iTF_00242100; iTF_00870492; iTF_01409899; iTF_00422189; iTF_01060563; iTF_01480794;
- 90% Identity
- iTF_00422189; iTF_01291442;
- 80% Identity
- -