Istr022795.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- -
- Assembly
- GCA_951213275.1
- Location
- OX577871.1:9309781-9316362[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 7.2e-05 0.0059 17.6 0.3 3 23 1089 1109 1087 1109 0.97 2 10 0.00099 0.081 14.0 0.1 1 23 1114 1137 1114 1137 0.96 3 10 0.52 42 5.5 3.0 2 19 1143 1160 1142 1165 0.86 4 10 0.01 0.81 10.9 0.6 3 23 1170 1190 1169 1190 0.97 5 10 0.036 3 9.1 1.4 2 21 1194 1213 1193 1214 0.94 6 10 0.029 2.3 9.4 1.3 1 23 1224 1247 1224 1247 0.97 7 10 0.0012 0.1 13.7 1.0 2 23 1254 1275 1253 1275 0.95 8 10 0.00029 0.024 15.7 1.9 1 23 1281 1303 1281 1303 0.98 9 10 0.24 20 6.5 0.4 1 23 1309 1332 1309 1332 0.82 10 10 0.0046 0.38 11.9 5.6 2 23 1338 1359 1337 1359 0.97
Sequence Information
- Coding Sequence
- ATGCCGCCACCAGTGCCAATCACTCTAATCGGAAACAATCTAGGAGAGCGACATCAATACCTCAACAAATTAGTAGCACAAAACGAAAAAGCTAATTTCACTTATATTGCCGATCTCCCAGAAAACTCTACAATAGACAAGCTGTTTAAAATAGATTTGGCATCAAAGATTAGAAATGTTGATTACATACTGCGTACTCTAAAAAATGAAGACATGCTCTACGTCAGCCGTGCTCTAAAATCAAGGTGGTTGTTGGAGGCGAAATATGGGGAAGTTGTAAACCCTGAAAACTTAGAAACTACTCTCTACCCCGAGATGATAACAACTGCTGTGAACAAAATGAAACACTGGATCCATTTGAATTTGAAAGACGAGAAGAGATGCGAGACATTCTATTCATATTATTTCGACAAAGATCGAAAACTTGCTTTGAAGTACCTGCCCAAATGCTCTGTGGAATTCGTTATTAATGAATTCCCAAAAATCGCAAACGACACAACTCCACATTTACTTAAAATACTATGTGAGAAAACTCCGATTGTCGCTAAACTGTTCTACGGAAAGGTCGACGAAGATAAAAAATTCGCATTAAAATATGTACATGACAATAAAAAGTACTTCGACAGCATTAAATGCGTGCTGAAAACTGATTCAGAAATATTTTTAGACATAGTAGAGAAATATTTCAGAAGCGAAACATATAATCGTTTGGGCAAAACTTTGACtaagtttattttatcttcGAAAAAGgacagatttttgaaaaagccaGAATTCTACACGTCTTGGGTTTTACATATTCAAACAGTAGCTGACTGTCTGAGTGAGGAAGAATCTGAGAATTTGGTGATACAGTTTGCACGATGTGAgttcttaaaaaaatggttcgaatttaaaaccGTTGAACCTTTTATTAAGCGATTGGATACAAATAAACGCtctgaattaaaaaacaaagtatttatCCGCAAAGAAATTGGTGAAGATATAAAAGATTGGCCGTATCCTGTGCCTAAAGATCTTCTATCAAACTTCGACGATGAAATTTCCATTTGGGTTACTGAAAGTGATAATATTGATTATAATATGGAATGCGCTGAGGATATGTGTGCAATGCCAGAACGCTATCAATGTAATCTTGatatttcattcaaaatggcTGATCATTCTGGCTTTATGAGGCAAAAAACATTCCTCGACAAACTCTTTGATGAATATCGTTTTAAGAATTTCGATAAGACTCTATTTGATCTACGGAACAAAATTACTTCTGAAAGTTCATCGCAAAATCGGATGCATATGATATTGGTTCTAATAAGCAAGAGCGGAGGGAAAGCTGAACATTTGCAAGCATTATTTGATTTGTTATTGAAACACTGTAACGAGCCATCTCAAGTCAGGGCTGCCATTATAAGAAGTTTAGTGAAACGGGCTTTCGTATGGCGCGTTACCGATGACCTGTGGTCACAACTGCTGACTTTCGGACATGGCCTTGGTTTGGACGGAACTCCGTCTGAAGCAGACTGTGATGAAGGTCTTCACGCAGTAGTCATAAGAGACCTACTACGAACTGAAACATGTAAAGCGcctatcaaaacaaaatatttgaaaaatttcTCAACACTCGATGATTACGGTTTGAGTAGTGCAGAAAAACAATACATTAAAGTCGCTTTACAGAAAATGTTACTTACTAGTGCGACAGATGATTCCGATCTAAAGACAGCGGCAGAAGCTATGACTTACTTGATAGATACTCTAGAAGCATACAAAGCTGGGACCGATTCTCAATTAATGTTAATACCGGCTCTTAAAAGTTTAGTTATGAAAGATAAGGACGTAACACAAGATATCCTGTATAGACTCTTCGTATCTAAAATAGGACGAAAAGAACTACTTCGAGAGAATTTCGACTTATATCAAACAGATGAATCGTATGTTAATGCGCTCAAACATGACATAACGGTTCTGTCGGAGGAGAAATTCCTTAAAGCACTAAAATCCGATAAACTTAACCGATTCCTCAGCAAGGTGAGCATTTATTTTGGAGAAGATGGGAGCTTGAGTTATAAATTCCTCTCTGCTATTAGGAAAGACAAACCAGAAAAAAATTTTGCAAAACCACTTACTCGGCTCATTGGTAGAAGTATAGCGTCTTATATTCTTGAAATAGACGGTAACAGCGATGCCGAAGTTAAACGATATGCGGCTCATATAAGAGCTAATGCGCATCTAGCAAGACCACAGATGGACTTAAACTCACTAGAATGGAAAACAGCAGGCGTGAAGCTACTTGCGATCAGAGTCCTCGTTTGCAAAACTGTAGATATAAATCAAAACATCGATAAATTGTTAAAATGGAAACGTTCTGCCAAACTAGCATTGTTATTAGCTCAGAGAATTAATAAGGAACATGAAGTCTTCCCAATCGTTGCGGAAGCAAGACCCACAGCTGCATTTAAGTTTGGATTACTTTACTTTAAGCAACGAGGTTCTAAATCTGACAGTCGTGTATGGATGGCATTCAAACCGATGATTCAAAACATTGAACCTTCAATTACATCCAGTCCTCATCTACAGAGAAAAATCAGAGAAGTTAACGCTATTCCACCAGATTTCAGACCAGAATACGTTGCTCTAGTGTTCCCAATACTAGATAAGATTGGGTTACATCAATCTTTGTTTGTCTTGCGTGATGTATTATCGCTTCTTTCTAAAATGAATgaagaatttatcaattctaTTCTAATTAGATTTTGCGGAGAAAAATTCTCAATTGAAGCAAAAGTACTGGAGTTTCTCGCTGGCAAAACTGAAAGAATTTGCAGGTTATGTTTTGCTTCTACTGAAAACAATGGACTCTTTCTAGATGATTGTGTTCGATTAAAAAGCAATATTGTTGATGAAACTATCTCTTACAAAGACATGTTATTAATACTGACCAATACCTTAGAAGATAAGTTACCCTACATGGTGTGCACAAAATGTGGTGACAATATCAAGAACTCATATCTATTCCTTAAGAGTTGTGAATATTCCAACAAACAATGGAATCATTGTTTAGACATCATAAAGAATTCAATAGATCTAACCAACGATGTAAACTACAACATACAAACAGTTTATATCATGatgaaaaacaaattattatttacaagcaAGAGAACTGttgataaatgtaaaaaaactgtaGTAACTAAAGTCAATAGCTTAGTTCGAGGTCGAAAAACTTATGAAAGAACCAAAAACCAATCTCAAGTTATATGTGAACAATGTGGAGTCACTTTACCTAGTAATTATCACTTAGCAAAGCATATGAGAAGTCATTGCAATCAACGATATCCATGCCCTCAATGCTACAAAGTGTTTGCATCTCAAATGCAAGTCAAAGGTCATATCGAAAGACTACATAAACCTAAGAAAGTCATGTGTTCCAAATGCTCTAAAATGTTCCCAACTCAAAAAATGCTCAAATGCCATGATAGAGCACACCATGTTGCGGCTATCTGCAAAGTATGTTTTGTTCAATTCCCTTCAAGAAATAGTCTAAGGCTACACATGGATAAGCATGATGAGAACAAATGCCCTCGCTGTAATAAATCTTTCCTAAACAAACAGACGTTCAAACTACATTTGAAAATATGTAATGATAAAGAAAAAGTCCCACAATTCTTCTGCGACTTATGCAATAGAGGTTATCTTAGAAAAAACGGTTTACGAACACATTTAAAGACTGATCATGGGTTTGGAGAACTGCTCAACTGTAATTGGTGTAACAAAAAGTTTGATGCCAAGAGTAAACTAAAGCTTCATATTGTAAAACATACTAAGGAAAAGAACTACCACTGTGAACAGTGTGGAAATAAGTTTGTCACGAAAGCATCGTTACAATATCATGTTAGATTACACACGGGCGAGAAACCATTTCCTTGTGATATCTGCGGTGAAAGTTTCCTCTCTGCATCTCGAAGGGTGGAACATAAGAAAAGAAAGCATATTGGACCGATGAAAGAATGTACTATATGTCATAATAAATATGTGACTAGTCATCAGTTAAAACAGCACATGTCAAGGCATAATAATCCACAAAGTAGACTCTATGTTAAGGACAATGGGTGCCTGTCGATaaacattaataattataatcttgtTAAGTAg
- Protein Sequence
- MPPPVPITLIGNNLGERHQYLNKLVAQNEKANFTYIADLPENSTIDKLFKIDLASKIRNVDYILRTLKNEDMLYVSRALKSRWLLEAKYGEVVNPENLETTLYPEMITTAVNKMKHWIHLNLKDEKRCETFYSYYFDKDRKLALKYLPKCSVEFVINEFPKIANDTTPHLLKILCEKTPIVAKLFYGKVDEDKKFALKYVHDNKKYFDSIKCVLKTDSEIFLDIVEKYFRSETYNRLGKTLTKFILSSKKDRFLKKPEFYTSWVLHIQTVADCLSEEESENLVIQFARCEFLKKWFEFKTVEPFIKRLDTNKRSELKNKVFIRKEIGEDIKDWPYPVPKDLLSNFDDEISIWVTESDNIDYNMECAEDMCAMPERYQCNLDISFKMADHSGFMRQKTFLDKLFDEYRFKNFDKTLFDLRNKITSESSSQNRMHMILVLISKSGGKAEHLQALFDLLLKHCNEPSQVRAAIIRSLVKRAFVWRVTDDLWSQLLTFGHGLGLDGTPSEADCDEGLHAVVIRDLLRTETCKAPIKTKYLKNFSTLDDYGLSSAEKQYIKVALQKMLLTSATDDSDLKTAAEAMTYLIDTLEAYKAGTDSQLMLIPALKSLVMKDKDVTQDILYRLFVSKIGRKELLRENFDLYQTDESYVNALKHDITVLSEEKFLKALKSDKLNRFLSKVSIYFGEDGSLSYKFLSAIRKDKPEKNFAKPLTRLIGRSIASYILEIDGNSDAEVKRYAAHIRANAHLARPQMDLNSLEWKTAGVKLLAIRVLVCKTVDINQNIDKLLKWKRSAKLALLLAQRINKEHEVFPIVAEARPTAAFKFGLLYFKQRGSKSDSRVWMAFKPMIQNIEPSITSSPHLQRKIREVNAIPPDFRPEYVALVFPILDKIGLHQSLFVLRDVLSLLSKMNEEFINSILIRFCGEKFSIEAKVLEFLAGKTERICRLCFASTENNGLFLDDCVRLKSNIVDETISYKDMLLILTNTLEDKLPYMVCTKCGDNIKNSYLFLKSCEYSNKQWNHCLDIIKNSIDLTNDVNYNIQTVYIMMKNKLLFTSKRTVDKCKKTVVTKVNSLVRGRKTYERTKNQSQVICEQCGVTLPSNYHLAKHMRSHCNQRYPCPQCYKVFASQMQVKGHIERLHKPKKVMCSKCSKMFPTQKMLKCHDRAHHVAAICKVCFVQFPSRNSLRLHMDKHDENKCPRCNKSFLNKQTFKLHLKICNDKEKVPQFFCDLCNRGYLRKNGLRTHLKTDHGFGELLNCNWCNKKFDAKSKLKLHIVKHTKEKNYHCEQCGNKFVTKASLQYHVRLHTGEKPFPCDICGESFLSASRRVEHKKRKHIGPMKECTICHNKYVTSHQLKQHMSRHNNPQSRLYVKDNGCLSININNYNLVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -