Basic Information

Insect: Idaea straminata
Gene Symbol: pita
Assembly: GCA_951213275.1
Location: OX577848.1:7255007-7273285[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.2 1e+02 4.3 0.2 2 22 206 226 205 228 0.85

2 10 4.1e-05 0.0034 18.4 0.1 3 23 235 255 233 255 0.96

3 10 2.3e-05 0.0019 19.2 2.2 1 23 261 284 261 284 0.95

4 10 0.018 1.5 10.1 1.0 2 23 291 312 290 312 0.96

5 10 0.19 16 6.8 1.8 3 23 322 343 320 343 0.89

6 10 2.6e-05 0.0021 19.0 1.0 1 23 349 371 349 371 0.97

7 10 0.0002 0.016 16.2 8.8 1 23 377 400 377 400 0.98

8 10 0.0017 0.14 13.3 0.1 1 23 413 435 413 435 0.93

9 10 0.0021 0.18 13.0 0.1 2 23 441 462 440 462 0.96

10 10 0.0016 0.13 13.4 0.2 1 23 468 491 468 491 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.2	1e+02	4.3	0.2	2	22	206	226	205	228	0.85
2	10	4.1e-05	0.0034	18.4	0.1	3	23	235	255	233	255	0.96
3	10	2.3e-05	0.0019	19.2	2.2	1	23	261	284	261	284	0.95
4	10	0.018	1.5	10.1	1.0	2	23	291	312	290	312	0.96
5	10	0.19	16	6.8	1.8	3	23	322	343	320	343	0.89
6	10	2.6e-05	0.0021	19.0	1.0	1	23	349	371	349	371	0.97
7	10	0.0002	0.016	16.2	8.8	1	23	377	400	377	400	0.98
8	10	0.0017	0.14	13.3	0.1	1	23	413	435	413	435	0.93
9	10	0.0021	0.18	13.0	0.1	2	23	441	462	440	462	0.96
10	10	0.0016	0.13	13.4	0.2	1	23	468	491	468	491	0.95

Sequence Information

Coding Sequence: ATGGATAATAGAAAAGAATCTATAAGTGCGATGAAGATGTGTCGATTTTGTTTGACGCAAAATGAACCGTTGTCGTCGTTGTACGACAAAATCAAAGCGCCAAAAGATCCTGTGCCACTTTCCTTGAAAATCCTATCTTGCGTCGGTATTGAGGTATTCCCTTCAAGTAGAACTCCCCAATATATATGTCACCAGTGCAAGTTCTTTATAGACATTAGCTTTGGCTTTAAACAAATATGCAGGCAGGGAGATGAGAGTATCTTACAATTTGTCCAACATGAAAAATCTATTGGCCCAGTATCCTGGCCGTCTGCTCTCAGAAAAGTGTTTAAGTTATGCAATAAAGGTGTACCGGGAGATGTGGGTATGGTAGAAACAGTGACAACACAGAGTGGAGCTACGGTCCAAGTGATGGCCGAGGAGGTCTCGGAAGATGAAGAAGAAGGAGATGATGACAATGTCTATAATGTTAAGgtTGCAGATGGACCGGAAGAAGGCAAGCGCATCAAAATAGTTACAACTGAAAAGCCAGACGCAAAGAAACGTAATAGGAAAGattcaGAGGGGGAGAGTTTTGAGCATCGTACGGTAAAGAATGATGGTAATGGATGCTGGCCATGCGACGATTGTGACTGCACGTACCCGCTGGAGCAGTTGCTAGCGCTGCACAAAGCGGCGAAACATCGAGAGAAAGTTGTTAATTGTGATGAATGCGATGCTAAATTCTCCACCAAGTATGAACTGTCTGCTCACCAATTGATCCACGCTGCTGACTTGCCATTCCAATGTGACACTTGTGGGAGGAAGTTCAAGAGGAATCAACTACTCAAACAACATGAGAAATTAATGCATCCAGATATGCCACAGAAGGAATGTAGCCGCTGCCCCGCCAAGTTCCACACCGCTGAGGAGCTTGAAACGCATGAACAAAGgcatatatataatatagaatGGCCTTATTGGTGCAAACATTGTGATAAAAGATTCCAAGAGAAAACAATACTGGTCAAGCATCAAGAGTTCGTTCACAAGAAGAAGGCTGCATTCAGCTGCCAATATTGTCCAGAGCAGTTTTCCACGGTATCGAAACTGACTAGACATTTGAAAGCTCACGCTGGAGAAAGACCTTATCCGTGCAAACACTGCAGTAAGAGCTTCATAAAGTCTCATCATTACACCAGACATCTCCGGGTGAAGCACAGCGATGTCCGCGGCCAAACGGGCGCCGAAGACGCGTACCGCTGCGAGGAGTGCGAGGAGACGTTCTCTGCACAGGACGAGCTGATGTACCACTCAGCGCTGCACGCTACGAGGAACCTCATCTGTCCTCTCTGCCAGGAGAAGTTCAATGACGTCGATACTGTCACTGCGCATATCAAGTCGCATGTTAACGGTAGTGAATTCATGTGCGATTTCTGCGAGTTAATATTTACATCAAAGGAGAAACTGGAAAACCACGTTGCGTCTGCGCATGATGATGAACTTTTGGCAAATGATCAGGAAATGGAGCAAGATGAGTCTTCTATGGAAATGGACGCAGAAGAAGACGACGATGACAATTCTATAAACGTAAAAGAAGAAGATGGACACATGGTAGTCGAAATCAACAAAGCTGAGCAGTTTATGCTCCGTTCACAAGATGAAGAGGAAAGGAATGACAACACTCAATCCGAAGATAGCGAAATGGAAGCTCCTTACGAGCCGCCTCCTCCTAAACCAACCAATGCCAAGActccaaaaaaaattgcaactcCAGAAAGGAAACCCGAACCACAAGTATTAATTGAAAAGCTTCCGATATCTAAGTCAGTCGCTAAACCTGCGGATTCTAGCGAAAAGACGGCGCCCTCTATATTAAAGAAAGCAGAAGAAATAAAACGGCAAGTTATTGAGCAACAATCGTCCGCTATATTAGAAAAGGCTATGGAGAAAAAGtcgaataataacaataaagtgGAAAGCAGTAGTACGGCGTCTGGTGCCAGCGAGAAATCACTGCGTTTATTGGAGAAGGAACTTCAGGACTTGAAAAGGACTAACACCCGCAATGAAGCCAGTAAAACACCGGCAAAACCACTGGAAGGCTTGAGGAAAAGACCGGTTATACACACTTCTACACCAAAGACAAGAACTGCTGAAAAGAGAGAAGTCCAACAAACTAAACCTATAGAAAAACAAGTTGTACCAGAGAAGAAATCTGAACGGCGTACCGTCACTAAAGACACGAAAGATTCAGCCTCTAAAGAGACAAGAGAACCTAAAGAGCCTAAAGAGACAAGAGAACCTAAAGAGACAAAGGAAGTAAAGGGAAATAGTGTGCGGGAAGAAAAGTTGGACAAAGATAATACAAAGGAGGAAATCGGTAAAGCTGAAAAGAAAGAGGTTAAAGAAAAGGAGAAAGAGAAGGCTGTAGTAAAGAACGGTGTTAGTGAGAAACCTCAAGAAGAAGGCGTTGTACGCAGATCCACGAGACCTTCAAAAGTTAAAGATTACGCTAAAATGATTCGCGACAAtatatCAACATCTGAAGAAGATTCTGATGAGGAAAGTTACGAGGATGATTCGAAAGATACCGATAAATCGTCagagACGACGACACCCCGCGGACGCGGTCGCAAGAGCATCAGCAAGACTCCGGCCACACCTGCGCCGGCACCGACCAAGAGCACAGCGGTCACACCCGCCACACCGGCTACCGCGCCTAGGAAACGAGGACGTCCAAGGAAAATACAGAACCAGGAACCAACATCTGCTAAAATAAGGAAAGAAGAATCTCCGGAACATACTGAGAAATCTGAGTTTGCAGAAGTTGCGAAAACTGAAAGTGCAGAAGTTGAGAAATCCAAAGAAGAACCTGAAATCAAAGAAGAGCCTGAAGAAAAAATTGAGGAATCCGAATCATCAAAGCCTATGGAAAACAGTAATGTCATGGTATCACCGTCCGGGCAGACATTCAAAAAGGTACCCATTAAAGCCCTTCCGCCTGGAATAAAACCTTTGCCGCTACCACGATCAATGGGTGCCGGTGAAGTATGTGAAATGCAGATCGGCAAGAAAGTCGTTAAAGTACAAAAGATTGTAATGACAAAAGCTGAAGTTGAGGAAATGGCTAAGAAGGGGCTCGTGGAAATGAAGGATGGCACAATGGTGTTGAAACAAGGCATCAAACTGCCCGGCACAGACCCGACGTCGTTTAAATCAACTATTATGGGAGATGGAGAGAAGAAACTAGAATCTTCGAAGAAAGAATAG
Protein Sequence: MDNRKESISAMKMCRFCLTQNEPLSSLYDKIKAPKDPVPLSLKILSCVGIEVFPSSRTPQYICHQCKFFIDISFGFKQICRQGDESILQFVQHEKSIGPVSWPSALRKVFKLCNKGVPGDVGMVETVTTQSGATVQVMAEEVSEDEEEGDDDNVYNVKVADGPEEGKRIKIVTTEKPDAKKRNRKDSEGESFEHRTVKNDGNGCWPCDDCDCTYPLEQLLALHKAAKHREKVVNCDECDAKFSTKYELSAHQLIHAADLPFQCDTCGRKFKRNQLLKQHEKLMHPDMPQKECSRCPAKFHTAEELETHEQRHIYNIEWPYWCKHCDKRFQEKTILVKHQEFVHKKKAAFSCQYCPEQFSTVSKLTRHLKAHAGERPYPCKHCSKSFIKSHHYTRHLRVKHSDVRGQTGAEDAYRCEECEETFSAQDELMYHSALHATRNLICPLCQEKFNDVDTVTAHIKSHVNGSEFMCDFCELIFTSKEKLENHVASAHDDELLANDQEMEQDESSMEMDAEEDDDDNSINVKEEDGHMVVEINKAEQFMLRSQDEEERNDNTQSEDSEMEAPYEPPPPKPTNAKTPKKIATPERKPEPQVLIEKLPISKSVAKPADSSEKTAPSILKKAEEIKRQVIEQQSSAILEKAMEKKSNNNNKVESSSTASGASEKSLRLLEKELQDLKRTNTRNEASKTPAKPLEGLRKRPVIHTSTPKTRTAEKREVQQTKPIEKQVVPEKKSERRTVTKDTKDSASKETREPKEPKETREPKETKEVKGNSVREEKLDKDNTKEEIGKAEKKEVKEKEKEKAVVKNGVSEKPQEEGVVRRSTRPSKVKDYAKMIRDNISTSEEDSDEESYEDDSKDTDKSSETTTPRGRGRKSISKTPATPAPAPTKSTAVTPATPATAPRKRGRPRKIQNQEPTSAKIRKEESPEHTEKSEFAEVAKTESAEVEKSKEEPEIKEEPEEKIEESESSKPMENSNVMVSPSGQTFKKVPIKALPPGIKPLPLPRSMGAGEVCEMQIGKKVVKVQKIVMTKAEVEEMAKKGLVEMKDGTMVLKQGIKLPGTDPTSFKSTIMGDGEKKLESSKKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00834987;
90% Identity: iTF_00834987;
80% Identity: -