Istr024862.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- X-element\ORF2
- Assembly
- GCA_951213275.1
- Location
- OX577875.1:2150556-2160746[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.35 28 6.0 0.4 1 20 54 73 54 75 0.93 2 18 0.46 37 5.7 0.3 2 23 120 141 119 141 0.90 3 18 0.041 3.4 9.0 0.3 2 23 168 190 167 190 0.93 4 18 0.017 1.4 10.2 4.2 1 23 213 235 213 235 0.98 5 18 0.0019 0.16 13.1 0.4 2 23 239 260 238 260 0.96 6 18 6.9e-05 0.0056 17.7 5.3 1 23 265 288 265 288 0.97 7 18 0.1 8.4 7.7 2.2 2 23 299 321 298 321 0.92 8 18 0.00051 0.042 14.9 0.5 1 23 327 350 327 350 0.97 9 18 1.6e-05 0.0013 19.7 1.2 2 23 355 376 354 376 0.97 10 18 0.89 73 4.8 0.4 1 14 382 395 382 399 0.87 11 18 0.72 59 5.0 3.8 1 23 440 462 440 462 0.98 12 18 6.3e-05 0.0051 17.8 4.5 1 23 535 557 535 557 0.98 13 18 0.37 30 6.0 0.6 2 23 562 583 561 583 0.95 14 18 0.00099 0.081 14.0 3.0 1 23 588 611 588 611 0.95 15 18 0.86 70 4.8 4.6 2 23 621 643 620 643 0.94 16 18 0.081 6.6 8.0 0.2 1 23 649 672 649 672 0.95 17 18 0.00044 0.036 15.2 0.4 2 23 677 698 676 698 0.97 18 18 0.0005 0.041 15.0 3.3 1 23 704 728 704 728 0.91
Sequence Information
- Coding Sequence
- ATGAGCATATTTTGGCATGCCATAGAACTGTACTTGAACgGGAACCAAGAAGACACCAAGAACAACGTTTGGGGAGTGACAGAGCTCGAACGTCAAAACGCAGCTACGCTCGTTGAAAACACTACCATCAAACCATTTGTTTTCAACTTATATAAGCAATTCTGCTGCTTATATTGTGATGATAAGTTCACGGATAAAGATGAAGCTTTAGCACATATAACAGGAAAAGCTACGAAAGTAAAGAAATCTCCAAAGAACGGGTATTACTGGAAGATGACGGACTCCGAACGCGAGAACGCTGCGACACTCATGGAATTCACGACCGTCAGACCTTTCCTATCACAAACGGCTTATATAAAATGTTTCTATTGCGACAACACATTTACCGAAACCAACCTGGCTGCAAGCCACTTAGCTTCACACGAGACACCGTCTCGCAAAGACCTAATGGAAACGCATTTAAAGGCAAAGAAAATCGTCAAAGTAGACGTATCGGATTTAAAATGTCGCATCTGTGAAGAGAAATTCACAGATTTGCTAgaaataagaaaacatttaatATTACAGCATAAGAAAGAATTTAAAGCAGCTGAAAGTGGTCTTATGGCTTACGATTTGAACTCCAAAGTTGGTGTTTTCTCTTGCTGTACTTGCAAAAAGGGATTTAACTCCTTCTTCGTTCTGAATCAACACATGAATGTACATTTTAGCGTTGTCTGCGAGACTTGTGGACGTGGTTTCTCATCTTACACTAGATTAATGAATCATAAAATCAGACATGAGAACGGGAACTACCGCTGCAAGATTTGCCCTGAAGTATTTTCCAACAAGCATAAATTACGGCATCACGTTAGCAAAAAGCATAAAATAACTACGAAGACACTACAGCCGTCAAAATGTCCGCACTGTCCTGAGAGATTTTCAGGCTATCATCCCCGAATGAGGCATTTGAAAGACGTTCACGGAATTGTCTTTACTTTCGAATGTACGGATTGCAAAGCCGTCTTTCCTTACAGGAGATTGTTAACCGAACACACCAACAAAATCCACAAGCAGAACAATCAATGCGATTACTGTGGCAAATGCTTTGGCACGCCTACTTTACTCCGAATTCATGCGAAAAGTCATACGGGTGAAAAGAACTTTATTTGCACGATTTGCCAGAAAGCCTACGCGTATAAAAAAGAGAAAGAAAAAGACAAACGAGCGTACTGTCAGGGTACTGGGAATTGGCTAACGATATCCGAACGCAGAAACGCAGCGAACTTCATAGCGTACACCACAGCAACCCCTCTAGTCTTCAGCAAACATTTGAATCACAAATGTTTCTTTTGCAAGCAACAGTTCACCGACGTTGAAAAAGTCCTCGAACACTCCAGAACTCACGATGTAATAAAACAGTCTGAGATTTTCGAAAAATTACTCTCGAAAGGATGGCGGAGTCTCAAAGTTGATATATCTGAACTTAGGTGCAGAATTTGTCAAGAAAAGCAACCAGATTTAGAAGCGATTAAGGTCCATTTGATCAATGAACACAATATAGTTTTTACACCATCTGGAAATGGTCTTTTAGGGTACAATTTGGCGACGAAAAACGGACAATTTTACTGCCATTTATGCAATAAGAAGTTCCCAACATTTTTCCAATTAAATCAACATATGAATATACATTTCAGCAACGTAGTTTGTGAAACTTGTGGCGTCACGTTCTTATCTCACAGACGGTTAAAAGTACACACAGAAATTCATCGCCTTGGCGACTTCTCTTGCAAAACTTGTGGGAAAAGCTACAAAACAGAATCATACTTAAAGTTTCATACCCAAAAGGCTCATTTAGGGAACCGCAAGTTACGAATGCTGAGATGCAGACATTGTCCGGAAAGATTCACGGAACATttccaaaaattaaaacatttaaaagaaGTACATGGAATCACATTTACTTTTGATTGCGACGCGTGCGCAGCTACGTTTCCCTCGCGTAGATCGTGGCGAGCACATCAAAATCGCAGCCACTCTGATAAAACGAAATGTGAATACTGTGCGCGTAGTTTTGGCACATTGGATCAGCTGAAACTTCATCTCGTCACCCACACAGGAGAGAGGAACCACAGCTGCAAAATTTGTCAGAAAACCTATCGATACAGCAGAGGATTACGCACGCATATAAAAATAAGGAACCACCTGGTTAATTTCTCTCTCTCTTCTAATAAATTTCCTTCGGCGTGGAAAAAGGCCAACGTTATCCCACTTCCTAAGTCCTCTAATCCAACCACTTTGTCTCAGTTTCGACCTATCTCTATCCTTCCAGTGCTGTCTAAAGTCTTGGAGAACGTCGTCCATAAACAACTCAGTGACTTTCTTGACGATCACAGGCTGCTTACTCCATTCCAGTCTGGCTTTCGACGTGGTCATAGCACTGTATCCGCCTTAGTAAAGGTTTCTGATGACATTCGTCTGGCTATGGAGAGGAAGTTTGTCACTGTCTTGGTGCTGCTGGACTTTAGCAGCGCTTTCAATTCTGTGGACTTTGATATTCTTTTAGGTATCCTTTTTTCTCTTAATGCATCACCGACAGCGATCTCTTGGTTTGACTCTTACCTTCGGGGTCGCTCGCAGTGTGTCCGCCATGAAGATTCCTTCTCTGACTGGTGTGATCTTGGTGCTGGTGTGCCCCAGGGTGGAGTTCTGTCTCCTCTTCTTTTCTgtgtttttatcaacactatcaCTAATGTGATATCATCTAACTTTCACCTGTATGCTGATGACTTGCAAATTTACAGCCATTTTCCAGCTGACGACATCGTCGAGCAGATTGAGTTAATAAACCGAGATCTTGTATCCATCTCCGAATGGGCTAAATCTTTTGGCCTCCTTGTCAACCCCTCCAAATCACAAGCTCTAATAGTAGGTAACACTTATCATCACAATACCATCGACAGGGGTCCAATGCCCGCCGTTGTGTATGATGATGTTAAAATTCCATACACCGATTGTGCAAAAAATTTGGGTGTTCTTTTTGATAGTCGGCTTTCATGGGAAAAACACGTCAATCTGATAAGCCAGAGAGTCTTTGCCACCTTTCACTCCCTCAGGCATCTCCAGAATATCCTGCCCCTGGAAACCAGGATCACTTTAGCTCAATCCCTTCTTCTTCCTCTTTTAGACTATGGCGACGTTTGTTTTCTGGATGCCACGGAAGTCCTCCTGAACAAACTCGAGAGACTGCAGAACGTTTGCATCCGATTCATTTTCGGCTTGCGTAAGTTCGACCATGTCTCCGAGTTTCGTGCTAAGCTGAAGTGGCTCCCGATTCGCCGTCGTCATGATCTACATGTTCTCTCATTTCTTTACTCGGTTCTTtttaatccctcctatccttcttacctccgtgagcgcttcagtttttgtgctcgaggtgcgtctaatagaagagcccagcaactcattctgaaccatcctcctaacacctcttccaaatacggtggctcttttacagtccaagcagtgaggctctggaacggccttccttgccatattcgggcgagtgagactctcagcacttttaaaaataaagtaaaagagcattatctgtcctgtgtgtag
- Protein Sequence
- MSIFWHAIELYLNGNQEDTKNNVWGVTELERQNAATLVENTTIKPFVFNLYKQFCCLYCDDKFTDKDEALAHITGKATKVKKSPKNGYYWKMTDSERENAATLMEFTTVRPFLSQTAYIKCFYCDNTFTETNLAASHLASHETPSRKDLMETHLKAKKIVKVDVSDLKCRICEEKFTDLLEIRKHLILQHKKEFKAAESGLMAYDLNSKVGVFSCCTCKKGFNSFFVLNQHMNVHFSVVCETCGRGFSSYTRLMNHKIRHENGNYRCKICPEVFSNKHKLRHHVSKKHKITTKTLQPSKCPHCPERFSGYHPRMRHLKDVHGIVFTFECTDCKAVFPYRRLLTEHTNKIHKQNNQCDYCGKCFGTPTLLRIHAKSHTGEKNFICTICQKAYAYKKEKEKDKRAYCQGTGNWLTISERRNAANFIAYTTATPLVFSKHLNHKCFFCKQQFTDVEKVLEHSRTHDVIKQSEIFEKLLSKGWRSLKVDISELRCRICQEKQPDLEAIKVHLINEHNIVFTPSGNGLLGYNLATKNGQFYCHLCNKKFPTFFQLNQHMNIHFSNVVCETCGVTFLSHRRLKVHTEIHRLGDFSCKTCGKSYKTESYLKFHTQKAHLGNRKLRMLRCRHCPERFTEHFQKLKHLKEVHGITFTFDCDACAATFPSRRSWRAHQNRSHSDKTKCEYCARSFGTLDQLKLHLVTHTGERNHSCKICQKTYRYSRGLRTHIKIRNHLVNFSLSSNKFPSAWKKANVIPLPKSSNPTTLSQFRPISILPVLSKVLENVVHKQLSDFLDDHRLLTPFQSGFRRGHSTVSALVKVSDDIRLAMERKFVTVLVLLDFSSAFNSVDFDILLGILFSLNASPTAISWFDSYLRGRSQCVRHEDSFSDWCDLGAGVPQGGVLSPLLFCVFINTITNVISSNFHLYADDLQIYSHFPADDIVEQIELINRDLVSISEWAKSFGLLVNPSKSQALIVGNTYHHNTIDRGPMPAVVYDDVKIPYTDCAKNLGVLFDSRLSWEKHVNLISQRVFATFHSLRHLQNILPLETRITLAQSLLLPLLDYGDVCFLDATEVLLNKLERLQNVCIRFIFGLRKFDHVSEFRAKLKWLPIRRRHDLHVLSFLYSVLFNPSYPSYLRERFSFCARGASNRRAQQLILNHPPNTSSKYGGSFTVQAVRLWNGLPCHIRASETLSTFKNKVKEHYLSCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -