Basic Information

Insect: Idaea straminata
Gene Symbol: -
Assembly: GCA_951213275.1
Location: OX577869.1:3141935-3144584[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.044 3.6 8.9 0.1 5 23 345 363 344 363 0.96

2 11 0.029 2.4 9.4 0.2 3 23 371 391 369 391 0.91

3 11 2.9e-07 2.4e-05 25.2 0.8 2 23 426 447 426 447 0.98

4 11 0.0029 0.24 12.6 4.3 1 23 453 475 453 475 0.98

5 11 0.031 2.5 9.4 0.5 2 20 480 498 479 500 0.92

6 11 6.3e-05 0.0052 17.8 0.2 1 23 536 559 536 559 0.96

7 11 0.00079 0.065 14.4 0.2 3 23 568 589 567 589 0.98

8 11 0.00015 0.012 16.6 0.2 1 23 597 619 597 619 0.98

9 11 4e-05 0.0032 18.4 3.6 1 23 625 647 625 647 0.97

10 11 0.0028 0.23 12.6 0.3 3 23 655 675 653 675 0.98

11 11 6.1e-06 0.0005 21.0 0.7 1 23 681 704 681 704 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.044	3.6	8.9	0.1	5	23	345	363	344	363	0.96
2	11	0.029	2.4	9.4	0.2	3	23	371	391	369	391	0.91
3	11	2.9e-07	2.4e-05	25.2	0.8	2	23	426	447	426	447	0.98
4	11	0.0029	0.24	12.6	4.3	1	23	453	475	453	475	0.98
5	11	0.031	2.5	9.4	0.5	2	20	480	498	479	500	0.92
6	11	6.3e-05	0.0052	17.8	0.2	1	23	536	559	536	559	0.96
7	11	0.00079	0.065	14.4	0.2	3	23	568	589	567	589	0.98
8	11	0.00015	0.012	16.6	0.2	1	23	597	619	597	619	0.98
9	11	4e-05	0.0032	18.4	3.6	1	23	625	647	625	647	0.97
10	11	0.0028	0.23	12.6	0.3	3	23	655	675	653	675	0.98
11	11	6.1e-06	0.0005	21.0	0.7	1	23	681	704	681	704	0.96

Sequence Information

Coding Sequence: ATGGAGACGTGGACTGACTTGTGCCGTTGCTGTTTATCGGCTGATTCGCAAGTATCACTGTTTGATAGTGAAAATAACGTGACCCAGAAATTCCTTGACATAACAACCGTTGAGGTTAAATCAGATGACGGTCTACCTCAGAAGCTATGTAAAGATTGCTACTCAACCCTAACTAGTGCACACAAATTCCGACAACAGTCCATCAAAATGGACACAGAACTGAAACTGCAACTTAATTCCTTCCTCTCGCAATGCAACGAGACTAACTTGGAACGTCTTGAAACTATTGCTGAGGAGGAAAATCCGGACGTAGAGTTTGCAAACAACCCTATGAAACAACTAGAGGCTATCATTAAGAAGGAACCGATGGATTCCGATGAAGATACATACTATGTCCTTGTCATCGATAACCCGAAGGACAAAGACACAACTGACAATCAACAATCTAACATAAAATGTGAACCaataacagaaataaaaacagaagtaaCAGATAACGTTGATGAAACAAATATGTCTGAGGCTGAGAATAACTCCATACCGGACAATTATGAAAGTGCAGATGATCGAGATATCGAATTCGATGAGAATACTATTGAATCGTTTATTCTACCACAGAATATCCCCCCTAATGTTCCCGCTACTATACTTGAAAGTGAAGAAATTGATGATGAGAACGATGATGTGAACATGGAAAGCCAGGATGGACTACCAGAAACACAGGAACCTGAAGAGGTTGATTCACAAAATGACATGATCACTCATTTAACTGACGAAAATACTCTTATCAAAATTCTAACAACAAGCACAAGCGGGGATGGTACTATGCTCTTAAAAACTGATGGAATACAGTACTTAACTGAAGGTCAACTGATTAGTAATGATGATGATGGATCCCAAGAAGTCATACTTTGTGAAGGAGACGAGTCACAATTCCAAATCTTGAAATACGATGGTTCAGAACTAGTCATCGAATACGCTGACGAAAGCCAAATTGGTCAGATATTATCgagtcaaaatattttaatatgtgaTTGTGGGGAACAATTCACAGATATAGCAGAGTATGAGAAGCATCAAGTTAAACATAACCCAGGGGGCGAGCATTTATGTACAATGTGTGGCAAAGGATTTGAATCAGCTGAGATACTTACAGGACATATGGTTCTGCATAATGTATCCGGACTATTGTTACACTGCCCATTCTGTAACCAGGCTATGAAACGTAGCATCCTAACCCAACATATCAAGTTtgctcataataatattaaaccgCAGTGCGGTATTTGCTCCAAAACGTTCGCCAACTCTAATAACTTGAAACGGCACATGATGATCCATTCTGGAGTTAAAGATTTCGAATGTGATATCTGTTTTAAAAGATTCCATCAAAAGATCACAATGCAAACGCATCGGCTTACGCATATGAATCCTCTATCGTGCTCCGATTGCGATACTTTGTTCCAAAATAAAGAAGAATTCACTCAACATAAGGAGTCCGATGAATGTTTGAACAACACTAAGATCTCTAACATACAAGCAAAGGAAGAAATTATGAAGACAGTCAAGAAAGAAGTTACAACTAATTTAGGCAAGTTGCTGGGTTATGCTTGCTCGTTATGCAAAAAGATGTTCTCAATAGAATCGGCTTTAGAACGACATATTGAAATGAATCATATTATCGATCCCAATGAACTGTTATGTTCTGATTGCGGTGAAGTTCTTGCTTCGAAGAAAGATATGCAAAATCATATTCTAACTCGTCACaaacgtaaaaatattaagaactTTGAATGCTCTGTTTGTGGGAAAGGTTGTCCTTCTCAAGCTATGTTGTTAATGCATGAACGAGTTCACACAAACGAACGACCATTTGCATGTCAACTCTGCCCATTAAAATTCAAAACTAAAACTCACCTACGAACTCATCAACTAACTCATACGAGAGAAAAGAAGTTTGGTTGTTCTGTTTGTATGAAATTCTTTGCGTTAAAAGGGAATTTAGTGGTTCATCTTCGGACACATACTGGTGAACGGCCGTATGTATGTTCTATATGTGGGGAAGCGTTCATAGATTCGAAGTATCTTAAGAAACATAAGTTAAAGAAACATTCTATTGGTAATGTACCGTGGAATCAATATTTAGTTCCTCAGAATTCTGAATAA
Protein Sequence: METWTDLCRCCLSADSQVSLFDSENNVTQKFLDITTVEVKSDDGLPQKLCKDCYSTLTSAHKFRQQSIKMDTELKLQLNSFLSQCNETNLERLETIAEEENPDVEFANNPMKQLEAIIKKEPMDSDEDTYYVLVIDNPKDKDTTDNQQSNIKCEPITEIKTEVTDNVDETNMSEAENNSIPDNYESADDRDIEFDENTIESFILPQNIPPNVPATILESEEIDDENDDVNMESQDGLPETQEPEEVDSQNDMITHLTDENTLIKILTTSTSGDGTMLLKTDGIQYLTEGQLISNDDDGSQEVILCEGDESQFQILKYDGSELVIEYADESQIGQILSSQNILICDCGEQFTDIAEYEKHQVKHNPGGEHLCTMCGKGFESAEILTGHMVLHNVSGLLLHCPFCNQAMKRSILTQHIKFAHNNIKPQCGICSKTFANSNNLKRHMMIHSGVKDFECDICFKRFHQKITMQTHRLTHMNPLSCSDCDTLFQNKEEFTQHKESDECLNNTKISNIQAKEEIMKTVKKEVTTNLGKLLGYACSLCKKMFSIESALERHIEMNHIIDPNELLCSDCGEVLASKKDMQNHILTRHKRKNIKNFECSVCGKGCPSQAMLLMHERVHTNERPFACQLCPLKFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSICGEAFIDSKYLKKHKLKKHSIGNVPWNQYLVPQNSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00834892; iTF_00836817; iTF_00835858;
90% Identity: iTF_00834892;
80% Identity: -