Basic Information

Insect: Idaea straminata
Gene Symbol: Zfa
Assembly: GCA_951213275.1
Location: OX577872.1:3330189-3340401[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0027 0.22 12.7 3.2 1 23 177 199 177 199 0.97

2 13 0.0086 0.7 11.1 0.2 1 23 205 228 205 228 0.95

3 13 2.9e-07 2.3e-05 25.2 2.2 1 23 234 256 234 256 0.98

4 13 0.0058 0.47 11.6 4.0 1 21 262 284 262 287 0.95

5 13 0.051 4.2 8.7 8.6 1 23 293 315 293 315 0.97

6 13 0.0035 0.29 12.3 4.6 1 23 321 344 321 344 0.96

7 13 0.001 0.084 14.0 0.3 1 23 350 372 350 372 0.99

8 13 0.0004 0.033 15.3 3.0 1 23 378 400 378 400 0.98

9 13 0.00012 0.0096 17.0 2.7 1 23 406 428 406 428 0.96

10 13 0.00051 0.042 15.0 2.1 3 23 436 456 434 456 0.96

11 13 1.8e-05 0.0014 19.5 3.0 1 23 462 484 462 484 0.98

12 13 0.0019 0.16 13.2 1.4 1 23 490 512 490 512 0.96

13 13 2.6e-05 0.0021 19.0 0.5 1 23 518 541 518 541 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0027	0.22	12.7	3.2	1	23	177	199	177	199	0.97
2	13	0.0086	0.7	11.1	0.2	1	23	205	228	205	228	0.95
3	13	2.9e-07	2.3e-05	25.2	2.2	1	23	234	256	234	256	0.98
4	13	0.0058	0.47	11.6	4.0	1	21	262	284	262	287	0.95
5	13	0.051	4.2	8.7	8.6	1	23	293	315	293	315	0.97
6	13	0.0035	0.29	12.3	4.6	1	23	321	344	321	344	0.96
7	13	0.001	0.084	14.0	0.3	1	23	350	372	350	372	0.99
8	13	0.0004	0.033	15.3	3.0	1	23	378	400	378	400	0.98
9	13	0.00012	0.0096	17.0	2.7	1	23	406	428	406	428	0.96
10	13	0.00051	0.042	15.0	2.1	3	23	436	456	434	456	0.96
11	13	1.8e-05	0.0014	19.5	3.0	1	23	462	484	462	484	0.98
12	13	0.0019	0.16	13.2	1.4	1	23	490	512	490	512	0.96
13	13	2.6e-05	0.0021	19.0	0.5	1	23	518	541	518	541	0.97

Sequence Information

Coding Sequence: atGACGGCTCTATCGGTGTGCCGAGTGTGTTTAGTAGATAATTTGACTATGTACCGTGTATCGGATACATATCTTGAAGATATTTACGAGCGACTGACTTGTGGAaagTTGCAACAAGACGGACACCCTTCAACATTTTGTTACCTCTGCATCGCTCAGCTACGGAGATGTCACAAGTTTGTGGCAACTGCTCGCGAATCCAACGACATACTGATGCAGTGGCAACATGGACAGATGGATGAGAAACTGAGCCATACAACAAGACCGTTCTATACATTATCTGTAACAAATATAGACCAGTATCCCACAGATGGTCTGTTGGAGGAAGTGGTCTTTATGGATATAAAGCCTGAACACACTGATTTATCTCATGTCAAAGGTACATCAACAACCAAACGTCGGAAAACGATAAAATCCGAACCGAAAGAGGCGAAACGTCGGAAAATCACAAAAACCGAAACGAAACAGGCGAAaagaacaagaaaaaaaacaccACAGCCAAAAACAGTAACTGAAGGCGAAAAACCTTTTTACTGTGACATTTGCGGCAATAGATTCTTGAAGAAAACACATTTAACTAAACATATTGAATATCATACGGACTCCGAGCCATTCGTCTGTACGAAATGCGATGTAAAATTCGATGCAAAAACTGAATGGAAAGATCATATAGTGAAAATACATACAAGTATCAAACCATACGCTTGCGGCAACTGTGATAAAGTATTCACGAAGAAATCACATTTGAACGACCACCAAATGACGCATACGAAAGTTAAACCATTTCAATGCCAGCAGGACGGTTGTGGGTACAAATGCTCTAGGAAATTGGACCTAAAAAGGCACATAATGTGTGTACATAATAAAGAGAAACCATTTTGCTGCGAACTTTGTTCTTACAGatGTTCCTTCAAACATATGCTAGCCAACCATATGAAGATGCATACTGGAGCAAAACCATTTTCATGTAATATTTGCGATTATAAATGTGcaaagaaaatgtatttaaagAATCATTATTTGAGGACACACAGCGGTGAGAAACCTTACAAATGTGATGAGTGCGGCTTCCAGACGGCTATTAAAGGAAGTTTAAAGGAACACAGGAAGGTTCACACAGGTGAAAAACCCTTCTCGTGCGAGCTATGCGATTTCAAATGTGCACAAAAGGGGACATTAAAACTTCATTTGCGACGACATACGGGCGACAAACCGTACCTCTGTCACATATGCGACTATAAATGCACAGAACCCAGTTATTTGAAGCAACATATATTGGTACATTCGGGTGTAAAGCCTCTAGCTTGTACGATGTGCGAATTCAAATGCGCTGATCGGAGTAGCTTGAAGAGGCATATTAAATTACATACCGGTGAGAAGCCGTACTCGTGTGACCGGTGCGGTTACCGCTGTGCAGACAAGACTTATCTTAAAGTGCATATGAGGAGTCATACGCATGAGAAGCCGTATCTCTGCGAGTTCTGCGAATTCAGgacATCAAGACGGAGTTATTTGACGGCACATTCTAGGATACACACTGGGGAGAAACCATTTGTATGCAAATATTGTGACTACAAGAGCACGCAGAAGGGCGCTTTGAATATTCACGTAAGGAGAGTACATTCTAATGGCACATAA
Protein Sequence: MTALSVCRVCLVDNLTMYRVSDTYLEDIYERLTCGKLQQDGHPSTFCYLCIAQLRRCHKFVATARESNDILMQWQHGQMDEKLSHTTRPFYTLSVTNIDQYPTDGLLEEVVFMDIKPEHTDLSHVKGTSTTKRRKTIKSEPKEAKRRKITKTETKQAKRTRKKTPQPKTVTEGEKPFYCDICGNRFLKKTHLTKHIEYHTDSEPFVCTKCDVKFDAKTEWKDHIVKIHTSIKPYACGNCDKVFTKKSHLNDHQMTHTKVKPFQCQQDGCGYKCSRKLDLKRHIMCVHNKEKPFCCELCSYRCSFKHMLANHMKMHTGAKPFSCNICDYKCAKKMYLKNHYLRTHSGEKPYKCDECGFQTAIKGSLKEHRKVHTGEKPFSCELCDFKCAQKGTLKLHLRRHTGDKPYLCHICDYKCTEPSYLKQHILVHSGVKPLACTMCEFKCADRSSLKRHIKLHTGEKPYSCDRCGYRCADKTYLKVHMRSHTHEKPYLCEFCEFRTSRRSYLTAHSRIHTGEKPFVCKYCDYKSTQKGALNIHVRRVHSNGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00834884;
90% Identity: iTF_00834884;
80% Identity: -