Basic Information

Insect: Idaea straminata
Gene Symbol: -
Assembly: GCA_951213275.1
Location: OX577850.1:10564478-10573195[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0008 0.065 14.3 6.5 1 23 219 242 219 242 0.96

2 11 0.00013 0.011 16.8 2.1 2 23 278 299 277 299 0.97

3 11 6.4e-05 0.0053 17.8 0.2 1 23 305 327 305 327 0.98

4 11 0.00011 0.0092 17.0 0.2 1 23 336 359 336 359 0.93

5 11 0.0016 0.13 13.4 0.9 6 23 377 394 372 394 0.92

6 11 0.00088 0.072 14.2 6.8 1 23 400 422 400 422 0.98

7 11 2.2e-08 1.8e-06 28.7 1.9 1 23 428 450 428 450 0.99

8 11 0.008 0.66 11.2 1.2 1 23 456 478 456 478 0.93

9 11 9.6e-05 0.0078 17.2 0.3 1 23 484 505 484 505 0.98

10 11 3e-05 0.0024 18.8 1.4 1 23 511 533 511 533 0.96

11 11 9.5e-06 0.00077 20.4 1.4 1 23 539 561 539 561 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0008	0.065	14.3	6.5	1	23	219	242	219	242	0.96
2	11	0.00013	0.011	16.8	2.1	2	23	278	299	277	299	0.97
3	11	6.4e-05	0.0053	17.8	0.2	1	23	305	327	305	327	0.98
4	11	0.00011	0.0092	17.0	0.2	1	23	336	359	336	359	0.93
5	11	0.0016	0.13	13.4	0.9	6	23	377	394	372	394	0.92
6	11	0.00088	0.072	14.2	6.8	1	23	400	422	400	422	0.98
7	11	2.2e-08	1.8e-06	28.7	1.9	1	23	428	450	428	450	0.99
8	11	0.008	0.66	11.2	1.2	1	23	456	478	456	478	0.93
9	11	9.6e-05	0.0078	17.2	0.3	1	23	484	505	484	505	0.98
10	11	3e-05	0.0024	18.8	1.4	1	23	511	533	511	533	0.96
11	11	9.5e-06	0.00077	20.4	1.4	1	23	539	561	539	561	0.98

Sequence Information

Coding Sequence: ATGGATCTAGAACCTGGAACCAGTGGAGTTTCTGACGAAACGACAGAGGTTCTCGTTGGAACTGAAATTCCCTATTTGTTGTACCAAGCTTTAAGTTCCGGTACATGCATTTTACAAAGCGTTTGTCGGAGTTGCCTCTCTGTAAACAATGAGACGCTATATTCACTTTTACAAGATGAACAGCATAACGTAAACGATATGTTTTCCAAGATAACATCCATACAAGTAAATGAAAAGGATGGTCTTCCTAACAGTATATGTGGGACATGTCATCAAGAAATACTGCAATTTTACAActtcaaaacaaaatgcttGAACTCTGATCATGTGTTAAAAACTATATTGGATGGAACCTTTCAAAATTTAGATGACTGTGATGATGCAAGGCATGACTGTGATTCAAAAGATGATTTGGAAATGAAACTACAAGAAACGAATTTACAAGTGAAAGAAGATGAAGTAACTGaAAATAATGATACCTACTTGGAATGTTTGCGAAATGAAATGAGCAGTGACGATGAAGCTCTTTGTATTTTTCAAGAAAATGCGAAAGATGTAAAccTCGTAATAGTTGATAAAGGTAAACAAAGCAGTTTACGCAACAAAAAACAATGCAAAGAGAAGTTATCCAAAATATCAAAGCAAAGAAAACATCACATCTGCCCTCATTGTTCTAAGAAATATAAGAGAAAGAAGGCTCTCCATGGTCATATGCAGAAAGTCCACAAGTTACATAAATCGGGACACGGTTGTGAGCAATGTACAGATACTTTCACTTGCGAAAACGATCTCATGCTGCACCAGAGCTTACACAATAAGGATTCCGTTTGGAAGTGCAATCAATGTCATAAGGAATATAATGTAAGAGCAGCACTACGACGTCACTTACAACGTCATATGAGTTCGAAGCGTTACTCGTGCGACATCTGCGGGAAACAGTTCGTGGAGAACTACGCCATGTTGCGACATAGAATCGTCCATTCAGGACTGAAGCCGGAGAAGAAATACAATTGTAACTTGTGTGATAAACGTTTCGCGGATAGACGCGCGCTGGAGTCGCACGGTGTGACGGCGCACGGCGCGGGCGGCGACGGCGACGGCGAGGGGATGGGGCCGTGCGCGTGCGCATGTGGCAAGCGGTTCGCGTCGCGCCGCCTGCTCGCCTCACATCGCCGTGTACACAACGACGACAAGCCGTACGCCTGCAAATACTGCGACAAACGTTTCCGGCACGACTCTGCACGCAACACGCACCATCGCACGCACACAGGGGAACGTCCGTACGTGTGTTCCGTCTGCGGGAAGACTTTCATACAGCACTCTAATCTTACAATGCATATGAGGTCACATACAgGTGAACGTCCATACGCATGTTCGAAGTGTAACAGCAAGTTCTCAACCGGTTCAGCGTTGAAGAACCACGATCGATCTCACACAGGCGAGCGACCATACAGCTGCTCGGTTTGTGGGAAAAGATTCGCCCGTGGGAGTATGAAAGCTCACATGCGGATCCACACGGGCGAGCGTCCGTTCGCGTGCGCAGTGTGCCCGCGACGGTTCAACAACTCTTCACATTTACGTGAACATAGCCGGTTGCATACAGGTGAACGCCCGTTCGAATGTGCAATGTGTACACTGAAATTCCCCACAAAATCACATCTAATAAAACACGTACGTATTCacgaaaagaaaaaatcaaaaggAGTTGTTATGTACCGGCCTTATAAAGTGACAGCTGACAATGAATCAAATAATATAGTAATAGTTGAAGAGACTCCTCTGAAAGGGGAATTGATACATGAAGCTCCGATGGTAGCCCAAGAGTTAACAGTACCAAACGAAGAAGACATGGACCAAACAGAAGTAATCGTTCTCAATAACCCGCATGATTTGTCCGAAGGCTTCATTGTCGATGATATGAACTTGTTAGCGGTGAATGAAGGAGAGGTTAGCATATCTGCAACGAGTGCTATGGTGGAAGGAACTATTGTTAAGTTGTATCAATTGGATCAAAGTCTTGTACAGATACATAGGACACCTGGACAGTTGACCATTAGTAAAATTACAAGCAAAATGACTGCTAACTTTTAG
Protein Sequence: MDLEPGTSGVSDETTEVLVGTEIPYLLYQALSSGTCILQSVCRSCLSVNNETLYSLLQDEQHNVNDMFSKITSIQVNEKDGLPNSICGTCHQEILQFYNFKTKCLNSDHVLKTILDGTFQNLDDCDDARHDCDSKDDLEMKLQETNLQVKEDEVTENNDTYLECLRNEMSSDDEALCIFQENAKDVNLVIVDKGKQSSLRNKKQCKEKLSKISKQRKHHICPHCSKKYKRKKALHGHMQKVHKLHKSGHGCEQCTDTFTCENDLMLHQSLHNKDSVWKCNQCHKEYNVRAALRRHLQRHMSSKRYSCDICGKQFVENYAMLRHRIVHSGLKPEKKYNCNLCDKRFADRRALESHGVTAHGAGGDGDGEGMGPCACACGKRFASRRLLASHRRVHNDDKPYACKYCDKRFRHDSARNTHHRTHTGERPYVCSVCGKTFIQHSNLTMHMRSHTGERPYACSKCNSKFSTGSALKNHDRSHTGERPYSCSVCGKRFARGSMKAHMRIHTGERPFACAVCPRRFNNSSHLREHSRLHTGERPFECAMCTLKFPTKSHLIKHVRIHEKKKSKGVVMYRPYKVTADNESNNIVIVEETPLKGELIHEAPMVAQELTVPNEEDMDQTEVIVLNNPHDLSEGFIVDDMNLLAVNEGEVSISATSAMVEGTIVKLYQLDQSLVQIHRTPGQLTISKITSKMTANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -