Basic Information

Insect: Idaea straminata
Gene Symbol: ZIPIC
Assembly: GCA_951213275.1
Location: OX577859.1:13761770-13763521[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1e-06 8.1e-05 23.5 3.9 1 23 207 229 207 229 0.98

2 11 0.11 9.2 7.6 0.1 3 23 258 278 256 278 0.90

3 11 2.8e-06 0.00023 22.1 0.3 1 23 284 306 284 306 0.97

4 11 1.3e-05 0.0011 19.9 0.4 1 23 316 338 316 338 0.98

5 11 5.5e-05 0.0045 18.0 0.7 1 23 344 366 344 366 0.99

6 11 1.5e-06 0.00012 23.0 0.3 1 23 372 394 372 394 0.97

7 11 5.9e-06 0.00048 21.0 1.1 1 23 400 422 400 422 0.98

8 11 2e-05 0.0016 19.4 0.2 3 23 430 451 428 451 0.96

9 11 0.00012 0.0099 16.9 1.7 1 23 481 504 481 504 0.95

10 11 0.23 19 6.6 0.7 1 23 510 535 510 535 0.91

11 11 0.00045 0.037 15.1 1.8 1 23 541 564 541 564 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1e-06	8.1e-05	23.5	3.9	1	23	207	229	207	229	0.98
2	11	0.11	9.2	7.6	0.1	3	23	258	278	256	278	0.90
3	11	2.8e-06	0.00023	22.1	0.3	1	23	284	306	284	306	0.97
4	11	1.3e-05	0.0011	19.9	0.4	1	23	316	338	316	338	0.98
5	11	5.5e-05	0.0045	18.0	0.7	1	23	344	366	344	366	0.99
6	11	1.5e-06	0.00012	23.0	0.3	1	23	372	394	372	394	0.97
7	11	5.9e-06	0.00048	21.0	1.1	1	23	400	422	400	422	0.98
8	11	2e-05	0.0016	19.4	0.2	3	23	430	451	428	451	0.96
9	11	0.00012	0.0099	16.9	1.7	1	23	481	504	481	504	0.95
10	11	0.23	19	6.6	0.7	1	23	510	535	510	535	0.91
11	11	0.00045	0.037	15.1	1.8	1	23	541	564	541	564	0.97

Sequence Information

Coding Sequence: ATGGAGGCGAAAATATGTCGTATTTGTCTCGGCAGGGTAGCCACTTGTCTTGTTTTCAATATCGAAGACGGTATCTCATACTGCGACAAGATAATGAAGTGTGTAGCGAACGTACGTATCGAGAGAGACGATGGCTTGCCTGATCACATCTGTGATAGCTGTGTGCGAGAGCTCGCCGCGAGCTACGACTTCGTACGGAAGTGCGAGGCTTCTGATATCACCCTACGGAACTGCTCCTTCAACTCGGACGACGCTGAACTCTTCCAGGAACCATCTACTCCATCAGAATCTAAGGAATTCGAGGACGATGTCAAAAACGAACCACATTCTCCAATAGGTCTCCCTGATCAATACAATATCGACTATTACAAAAACTCATACTTAGATATAAAAAACGAAATGAAGGAGAATCCAAACAACAGTGTCGAGAACAAGcagaaaagtttaaaaaaagaaagtaaatctaaaattaaatataataaaactgtaCCTGGACACCTTAGAAAGATAAAAATGAGAGTGATAACGGGGCCAATCCAGTGTACGGAGTGTGGGCTCATTAGCTCCTGCCACTCGGCTCATGAGATCCACCTTCGCAAGCACACAAAAGAGAAACCCTTCACCTGTGACATCTGCAACAAATCTTATAGAACCAAGCATTCATTACAATCTCACATAATGAGACATAATTGCTTCTCCAATATAAGAATAGAGAAGAATGTTAAAGAGTTTGATAAGAGAAAGAATAAACACAAAATGCCTCCTGTCACATGCATTGTGTGCGATCGCCAGTTGAACGGGCGCACCGTGTTGGAGGCTCACATGAGGACCCACACTGGGGAGAAACCTTTCGCTTGTCAAGTGTGTGGAAAGACCTTCTCTCTGAAAGGCAGCCTCGCCCGGCACACCGCCACCCACTCCACAAATAGGGAATCAGATTATAAATACATATGTGAACATTGTGGTAAAAGATTCGCCGGAAGAAATAATATAATTGTCCATTTACGAGTGCACACGGGAGACAAACCATACAAGTGTCCGTACTGCCCGATGCAGTTTGCTCAGACCTCTCCCATGATACGTCACAAGCGCAGGCATACCGGAGAGAAGCCCTTCATATGTGCCATTTGTGGAAGATCATTCATTGATGCATCATTGCTAAAAAAGCACCATTTAGTTCACACCACCGAAAAAAATTACCCTTGTCATATTTGTAACAAGACTCTTAAGAGTAAAGGTTCTCTGAAGATCCACATAGATTCCCACAACAATACTAAACGCTCAATCTGTAACATTTGTGGTCAGGAGTTTACTATGAAAGGAAATTTGGTAACACATTTAAAGAGAGCACATTCAGAGAAATCAGGATTCTGTACGAGCTGTAACAAAACATACCCTGATATAGATATACATATGAGAGTCCACAGAGGGGAGAAACCTTTCATTTGTAAGATCTGCGACCAGGGGTACACTACAAAAAATGGCCTCGCGCATCACATGAACTTTAAACACCGTGATAGTGCAAAGTTTAAATGTACAACGGATGCATGCAACAGATCGTTTCCGACGATGTCAATGCTGGAGTTCCACGTCCTGAAACAACACCTGGACACGTCGCCTTACGTGTGCCGCCACTGTGCGCGCTCCTTCCTCCGACCCAGCGACCTCTCTAGGCATCTCAAGATCTTCCATCTCGACACACATACTAAAATCAAGTCACAATTTATAAAGACTATCAAACTTACTGATTAA
Protein Sequence: MEAKICRICLGRVATCLVFNIEDGISYCDKIMKCVANVRIERDDGLPDHICDSCVRELAASYDFVRKCEASDITLRNCSFNSDDAELFQEPSTPSESKEFEDDVKNEPHSPIGLPDQYNIDYYKNSYLDIKNEMKENPNNSVENKQKSLKKESKSKIKYNKTVPGHLRKIKMRVITGPIQCTECGLISSCHSAHEIHLRKHTKEKPFTCDICNKSYRTKHSLQSHIMRHNCFSNIRIEKNVKEFDKRKNKHKMPPVTCIVCDRQLNGRTVLEAHMRTHTGEKPFACQVCGKTFSLKGSLARHTATHSTNRESDYKYICEHCGKRFAGRNNIIVHLRVHTGDKPYKCPYCPMQFAQTSPMIRHKRRHTGEKPFICAICGRSFIDASLLKKHHLVHTTEKNYPCHICNKTLKSKGSLKIHIDSHNNTKRSICNICGQEFTMKGNLVTHLKRAHSEKSGFCTSCNKTYPDIDIHMRVHRGEKPFICKICDQGYTTKNGLAHHMNFKHRDSAKFKCTTDACNRSFPTMSMLEFHVLKQHLDTSPYVCRHCARSFLRPSDLSRHLKIFHLDTHTKIKSQFIKTIKLTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00834867;
90% Identity: iTF_00834867;
80% Identity: -