Basic Information

Insect: Idaea straminata
Gene Symbol: -
Assembly: GCA_951213275.1
Location: OX577864.1:12985769-12995096[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.045 3.6 8.8 2.8 1 23 244 266 244 266 0.98

2 17 0.074 6.1 8.1 0.5 3 23 309 330 309 330 0.95

3 17 5.3e-05 0.0044 18.0 2.5 2 23 354 375 354 376 0.95

4 17 1.3e-05 0.001 20.0 0.2 1 23 385 408 385 408 0.94

5 17 0.12 9.8 7.5 0.1 1 23 417 439 417 439 0.81

6 17 1.8e-05 0.0015 19.5 1.3 1 23 445 467 445 467 0.96

7 17 0.00025 0.021 15.9 2.1 1 23 473 495 473 495 0.97

8 17 0.083 6.7 8.0 0.4 1 23 609 631 609 631 0.98

9 17 1.1e-05 0.00088 20.2 2.8 2 23 638 660 638 660 0.92

10 17 0.00033 0.027 15.5 0.6 3 23 668 688 667 688 0.97

11 17 3.2e-05 0.0026 18.7 0.8 2 23 695 718 694 718 0.91

12 17 0.05 4.1 8.7 0.4 1 23 724 746 724 746 0.95

13 17 0.039 3.2 9.0 1.9 1 23 757 780 757 780 0.96

14 17 1e-05 0.00083 20.3 0.3 3 23 848 869 846 869 0.95

15 17 3e-06 0.00024 22.0 0.7 1 23 876 898 876 898 0.95

16 17 0.0043 0.35 12.0 0.2 1 23 904 926 904 926 0.93

17 17 0.0017 0.14 13.3 0.1 3 21 932 950 932 951 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.045	3.6	8.8	2.8	1	23	244	266	244	266	0.98
2	17	0.074	6.1	8.1	0.5	3	23	309	330	309	330	0.95
3	17	5.3e-05	0.0044	18.0	2.5	2	23	354	375	354	376	0.95
4	17	1.3e-05	0.001	20.0	0.2	1	23	385	408	385	408	0.94
5	17	0.12	9.8	7.5	0.1	1	23	417	439	417	439	0.81
6	17	1.8e-05	0.0015	19.5	1.3	1	23	445	467	445	467	0.96
7	17	0.00025	0.021	15.9	2.1	1	23	473	495	473	495	0.97
8	17	0.083	6.7	8.0	0.4	1	23	609	631	609	631	0.98
9	17	1.1e-05	0.00088	20.2	2.8	2	23	638	660	638	660	0.92
10	17	0.00033	0.027	15.5	0.6	3	23	668	688	667	688	0.97
11	17	3.2e-05	0.0026	18.7	0.8	2	23	695	718	694	718	0.91
12	17	0.05	4.1	8.7	0.4	1	23	724	746	724	746	0.95
13	17	0.039	3.2	9.0	1.9	1	23	757	780	757	780	0.96
14	17	1e-05	0.00083	20.3	0.3	3	23	848	869	846	869	0.95
15	17	3e-06	0.00024	22.0	0.7	1	23	876	898	876	898	0.95
16	17	0.0043	0.35	12.0	0.2	1	23	904	926	904	926	0.93
17	17	0.0017	0.14	13.3	0.1	3	21	932	950	932	951	0.94

Sequence Information

Coding Sequence: ATGTTTTTTGATATAAATGGAGTTCAACCTTCCACTAGTACTTGGAACACCACAGCATCGCCATTTGGAAATAACTATCGAAATGAGAGAAAAGCAAATGTATGCCGGTTGTGTGCAAATCTTAGAGACGTAATGCATCCCATTTACGAGAACAAAGAACAACAGTGGAACATCAgtgagaaaataaacaaatatttgcctGTTGTTGTGTCTCCATCAGACCAGTTGTCTCAAATGGTATGTGGCTCATGTCTCCAAATGCTGATAACGTGGGACCAGTTCTCGCAGCAGTGTGTTGAGGTTGATGCCAAGTTGAAGAAGGAAGCTGGGGCTGTACAGCAGAAGGCTGAAcagATAAATGCCACAAGTGCAAATGATTCAAACGATACAAGTAGCCTGTCAGTGCGATACAATGATATTAAAACTGTACTGACGGAATATTTGAAAACGTTACAAATAGATGAGAACAGCGGCGACTTGACGATAATGTGTCAGAGTAGAGCGTGCGCATCAAAGCGAGCCTCCACAGTCAATAGCTTCATCCTGCATATGATACGGGTACATTCTACTGAGCTGGGCAATAGGAGCGAAATTGAAAAGTttgttaagaacaatgtcacaTTCGAAGAGAGCCTGCAGAGCGACTCGGAAGGCCATTCGTACTCGGATTCGGCGTCAGGTCCGATGCCGGCGCCGGAACAGCCTCGACCCGAGCCCGACATACCGTGCTTTTGTTGCCCATTCTGCGAGAGCGGGTTCTCAGTAAAGACACGCCTCCTCACGCACCTCAAGACGCACGACATCGACGTCGAGCTCGAGCAGGGCGTCACCTGCTGCGGGCAGCTGCACGCCAAGCAGGCGTTCATACAACACCTGCAGGAGCGACACGAGAGCAGCCGCGCGCGGCCGCCCGGCGCACCCTGGTGCCGCAGCTGCGGGTTCACTGCTCGGGACGACGAGCAGCTCCAGCGGCACATCCGAGACAACCACCAGGAAAAGAAGAGGCGGAAACCGAAGCCGCCGCGCGACGACGACAAGAACCAGAAGAACATCCCCGCCGTTTGCCCAGAGTGCAACAAGACGCTCTCGAACAAATACAACATGACGGCGCACTTCCGGCGACACCACGGCGCCAACGCCGGCTCCATCCGGCACGTGTGCGACCAGTGCGGCAAGTCGTACAGCACGGCCGGCAACCTGCGGCTGCACGCGGCGCGTGCGCACGGCGCCGGCGAGGCGCGCGCACAGTTCGTCTGCCCGCGCTGCGGAGAGCGTTTCGACACGCTCATCGGGCGTGACTCGCACCTCGCGCTGCACACGGGCGCTCGGCCCCATCCGTGCCGGTTCTGTGACAAGTCGTACCGCACGCGCGACGCGCTCGTCCGTCACATGGACGTGCACCTCGACGTGCGCCGGCACACGTGCACCGCATGCGGCCGCGGCTTCCGCAAGCGGAGCCATCTCGTCGCTCACGAGGCCACGCACGCCGCGCCGCGGTCGCCAACGTCCGTCCCCTCCGttaccgacgacgacgacggcgGCGGGGAGCTCGGCGAGCCCTACGACCGGTTCTATGCGGCTCTCGTCGCTCTCCGCGACCACTACGTACGTTCTCACGGGAACCTCGCGCTCGACTACGGTGAACCTAGTGAGGTAGACTCACAGCCGGACGGGGTGAGAGCCAGTGACGAAGGACCGGACCCGGACCCGGACCTCGACGCGTACGACGACTTGTCGCGGAATATAGGCCGCGGGTCGCGCGGGGACGAGGCTGCGCGCGCCGCCGTGCACGCCGCGCGCCGTCTCGTCGCCGGCCGTGAGGTGTACGAGTGCAGCGCGTGCGGCGCACGACTCGCCGCGCCCCACACCTTCATTCACCACCTGCGTATACATACCGGCGAGCGGCCCGCCGTCTGCCACATCTGCGGGAAGACGTTCCGCACCACGCATGCGCTACGCCGCCATCTCGCCGAGACGCACGAACGACGCCGCCGCCGCGCCTGCCTGCGCTGCGCCCGCACCTTCGCCAACTCGCAGAATCTGCGCCAACACTTGCGCATCCACACGGGCGAGCGACCGCACGTTTGTCTCGCGCCCGGCTGTGGCAAGCGGTTCGCGCAGAGCGGGTCGCTGCACGCGCACCTCAAGACGCACTCCCCGCGCATGCCGTTCGCGTGCTGTTCGTGCGGCGCACGGTTCCGGTTGCGCGCCGGCCTCGTTCGGCACGCGGCGCGTCACGCCGGCGTCGGAACGGGAGCGGCGCGCGCGCATCCCTGCTCGCACTGCGAAGCCGCCTTCCGCACCCGCCGTGCGCGCGCGACGCACGAGCGACGCGCGCACCTGCCGCTCGTCGACCCCGCCTTTCCGATGCACAGTGTAGGAAAATCAACTTCGAATgggatTGCGGTGCGGCCGGCGCGCGTGACGCGAGACGCGGGCGGTCGAAGGCGCGCGACTTGCGGCGCGTGCGGCGTCGTCGTCGCGCTGGCCGGGTGGCGGCGACACGCGCGCCGGCACGCCGAGCCGGGCGCGGGTACGGCGTGCACGCACTGCGGCCGCGTATTCTCCGAAGCGGGCAACCTAGCGAGGCACGTGCGCGCTCGACACGGCTCCGGCGCTCGCCCGCACGTCTGCCCAGATTGCGGGCGCGGGTTCTCACGTGCGGAGCACCTGCGGGAACACACGGCCCTACACTCGTCGACGCGCGCCTTCCTGTGCTCGGTATGCGGGTTGTCGTGCCGGTCGGCGGCGGCGTTGCGCGTGCACAGCGCAGTGCACGTGCGACGGCACGGCTGCACGTCGTGCGGCGCGGTGTTCGCGCGCGCCTCGCAGCTCACCAACCACTCCCGACGGGCTCGCTGCGCCACGCCACCTCCGGTCACGCCCGCCGAGATGGAGAAGACGAAGGTCAGTCCGGAGGTGGATACGGGACGGGACGACGTCGGATACGGCGTGGACCCAACGTTGCCGGACCTCGACGAATATTTCGATTACTTTTCTTGA
Protein Sequence: MFFDINGVQPSTSTWNTTASPFGNNYRNERKANVCRLCANLRDVMHPIYENKEQQWNISEKINKYLPVVVSPSDQLSQMVCGSCLQMLITWDQFSQQCVEVDAKLKKEAGAVQQKAEQINATSANDSNDTSSLSVRYNDIKTVLTEYLKTLQIDENSGDLTIMCQSRACASKRASTVNSFILHMIRVHSTELGNRSEIEKFVKNNVTFEESLQSDSEGHSYSDSASGPMPAPEQPRPEPDIPCFCCPFCESGFSVKTRLLTHLKTHDIDVELEQGVTCCGQLHAKQAFIQHLQERHESSRARPPGAPWCRSCGFTARDDEQLQRHIRDNHQEKKRRKPKPPRDDDKNQKNIPAVCPECNKTLSNKYNMTAHFRRHHGANAGSIRHVCDQCGKSYSTAGNLRLHAARAHGAGEARAQFVCPRCGERFDTLIGRDSHLALHTGARPHPCRFCDKSYRTRDALVRHMDVHLDVRRHTCTACGRGFRKRSHLVAHEATHAAPRSPTSVPSVTDDDDGGGELGEPYDRFYAALVALRDHYVRSHGNLALDYGEPSEVDSQPDGVRASDEGPDPDPDLDAYDDLSRNIGRGSRGDEAARAAVHAARRLVAGREVYECSACGARLAAPHTFIHHLRIHTGERPAVCHICGKTFRTTHALRRHLAETHERRRRRACLRCARTFANSQNLRQHLRIHTGERPHVCLAPGCGKRFAQSGSLHAHLKTHSPRMPFACCSCGARFRLRAGLVRHAARHAGVGTGAARAHPCSHCEAAFRTRRARATHERRAHLPLVDPAFPMHSVGKSTSNGIAVRPARVTRDAGGRRRATCGACGVVVALAGWRRHARRHAEPGAGTACTHCGRVFSEAGNLARHVRARHGSGARPHVCPDCGRGFSRAEHLREHTALHSSTRAFLCSVCGLSCRSAAALRVHSAVHVRRHGCTSCGAVFARASQLTNHSRRARCATPPPVTPAEMEKTKVSPEVDTGRDDVGYGVDPTLPDLDEYFDYFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -