Istr004860.2
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- -
- Assembly
- GCA_951213275.1
- Location
- OX577849.1:4738965-4747794[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0049 0.4 11.9 1.6 3 23 636 657 635 657 0.96 2 22 0.063 5.2 8.4 0.3 1 21 1048 1068 1048 1069 0.96 3 22 0.0012 0.099 13.8 1.4 2 22 1142 1162 1141 1162 0.94 4 22 0.03 2.5 9.4 0.8 2 23 1170 1192 1169 1192 0.95 5 22 0.013 1 10.6 0.2 3 23 1215 1236 1213 1236 0.96 6 22 0.00039 0.032 15.3 0.8 1 23 1242 1265 1242 1265 0.96 7 22 0.13 11 7.4 0.0 1 23 1290 1313 1290 1313 0.90 8 22 0.0058 0.47 11.6 3.5 1 23 1318 1340 1318 1340 0.97 9 22 0.01 0.84 10.8 0.2 1 23 1346 1369 1346 1369 0.95 10 22 0.03 2.4 9.4 3.6 1 23 1382 1404 1382 1404 0.97 11 22 0.00019 0.015 16.3 1.8 1 23 1460 1483 1460 1483 0.97 12 22 0.0036 0.3 12.3 1.9 1 23 1541 1564 1541 1564 0.96 13 22 0.0041 0.34 12.1 2.2 2 23 1591 1613 1590 1613 0.95 14 22 0.071 5.8 8.2 0.2 2 23 1619 1641 1618 1641 0.94 15 22 0.084 6.9 8.0 0.1 1 21 1685 1705 1685 1706 0.94 16 22 0.0013 0.11 13.7 0.6 1 23 1716 1738 1716 1738 0.93 17 22 0.00012 0.0096 17.0 0.3 2 23 1828 1850 1828 1850 0.93 18 22 1.9e-07 1.5e-05 25.8 1.1 3 23 1857 1877 1856 1877 0.98 19 22 0.0046 0.38 11.9 0.1 1 23 1895 1918 1895 1918 0.96 20 22 0.13 10 7.4 0.0 1 23 1939 1961 1939 1961 0.97 21 22 0.029 2.4 9.4 0.6 1 23 1967 1990 1967 1990 0.95 22 22 0.00027 0.022 15.8 0.4 1 23 1998 2021 1998 2021 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGAGGCGGAACCTCACGTCCTCGCTACGAAAATCAAGGATTGTGTCTCTGTGCAGATAAACGAAGACGACAATCTTCCGACGAATGTCTGCAGGAAATGCATGGACAATGTCAACAACTGGCATATATTCAAGATTGTATGTGAAAAGACACAAAACAAACTACAGTCTCTGATTGAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATCAAGAGTGAACCTTTGTCTGATGAGATATATGATGATGGAGTGGTTATTGACGCGTCATACGCTGAAGAGCACTCGGGGTCCGCAAAGATTCAACCAGAAGGCCCTCCGATCTTGGCTTCCTTGGGACTTACACCTCGAAGTGATAAGAACTATGTGGATCCCCGAATGGACTGGCACCGAGTGCATgccataatgaaaatgattCAAGACAACAATGTCATAGATTCCCTTCAAAATAATGAAGAAAGTGATATTTTGTATCAGTCCGATCATGATTCAGAATCAGAAGCCGAACTCGATCTTATCGATAGCTCATACAATAACTGTGATCAAGGTTACAAATGCTCTAATAATCAGATTCTGTTAAAATATCCACCAAAGATAATACAAAAAGGCACTTTAAACAAACGTAAAGGTAAATTTCCAAAGAATTGCCCTCGACCCAAAAACGCATGGCAACTGCTATTCACAGACGATCTACTTGAACTCATTGTGGCATCTACTAATGAGAACATAAACAAAAGCGCCTCAGTGGAAACTAATGTCAACGAAATTAAATCTCTTATCGGCATTTTGTACTTGCACGGCATTATAAGACCTACGCATCAGAGTGCAGATGACCTTTGGGACGATGAATACGGCGTTCCCTGCGTTAGAAACTCAATGACATTAGATCGATACAAGTTCCTTTTATCGTATATCAAGTTTGAAAAAGAGGAAAACAAGACATTCTTCGACCCGATGAGGCGAATGCGTACACTATTTGAAATGTTCACAATGAACTGTAGAACAGCCTTCAATATAGACGATACGGCGGTTGTCGACGAAGTCATTGTACCAGTTTATGGGCCTTGTCCGTTTCGATACGATATTGATAAGAAACCACTCAGACGTGGCATGAAAATGGTCATGTTGGTAGACCCAAGTAACTTCTACGTGAGTAACCTTGACGTGGTAACCGATCcgtattttaaagctgaagataTAGTTAAAAAAGTAACACAGCATTTAAATAAATCTGGTACAACAGTAATAATGGACAGCTGGTACTTTTCAAACAGTTTAATGAACACTTTGAAAGAATGCGGCCTATATACCATAGGTGCTTTGAACCCTAAAAGCGAGATCATACCACCTTTATTTGTGTCTAAATATAGAAAACCACATACATTTATGTCTGGATTCTCCAAAGACAATGTATCTGTTACTTCTTATGTCAACTCGGATTCAAAATCACTGAATGTTATTTCCTCCGATCCGAAGTATTATAGAAAAATTCATAAAGATAGTTCGACTGCTGTATCCGATTACATGAAGAACCAATCAGCAGTAGAGGTACTCGACGTACTAATGCACTACTACACAACAATGCAGCACACGAATGATTGGACCATGTCTTTATTCTTTACTCTTTTGAACATAGCGAGCATCAACGCTCAAGGTGTTGAAAGTGAGAAAGATGAAGATGAAGAGTTCGAAGAGGAGTCACTGCCAGTACCCCAACCGGTGAAAGTACCAGCCATGCCTGAGGTATCTATCACCGTTATGCGACCAACCGGTGAGACTCTGCATGCACGACAAGGCATCCAGCAGATCGCGTCGAAAGACTGCCTCATCTGTGGAAGAACCTACAGGTACTCACACAACGCTCGCCGACATGAACTTACATCACATGGCTTCGACCGCTACACAAACAAAATCACAAACAAGAGATCCGCTCACACCCGAAGCAGCCACATGCAGCCGAAACTTAGACCTAACCCGTTCAATCCCAAAGCGAGACTTATGCCTAACCCGATTAGCCACAAAATGCAGTTAGTATCCAAAAAAGTTCAACCAAAACTAATACCTCAAAAAATTATCACTCCCTCCAAACCCATACCTATTAAGGCTCCAAAAGGACCTTCAAACAATTTACCATACCCATTACGTATCAAAGCACTGAAGGATttgcaaataaagaaaaaggaACCACAAATATTGAAAACTTTACTGACTTCTAAACCAGAAGTTTTAGTATCAGAGCCAGAGATAATGAACTCTGGCCCGGAGAGTCCTGAGACGTTAATATCTGAACCAGAAATAGCGTCTTTCCAAGTGGAAACGATTCTGTCCGAACCTAATGATCATGAGAATGATGAGGCTGATCCCGAAGGCGACACGAATCAAGATATAGAGGATGAAGGTGATATGCAAAATAACCAGAGTCAAAATTATGACACTCTTAATATGGAATCCGATAATGAAATCGAAATCGCACGGGAACAAGAAAATGATGGTGAAGTTGCAGAAAATAATGACGAAGATAATGAACACATACTGCCCGATGACTATAACCATGCAGAAGAAGCAGAAATGGACGGTGATATTGATCGAGACAACGACACTGTTGACAGTCAGCAGATGGAGATTGATGAAAGCTACCTAGCTAAACGAGAGAATGACATTAAAGACGAGGAAGATGGTAACGAAGAAGGGGAACATGAAGATCACGAACAGAGTCAAGAGGGAGAAGAAAACGAATATGAAGAAGAACCACCTGTTGTACCAGAAGTAGAAATGAATGAAGAAATGCAGGCCAATTCCTACAACAGTGAGGCAAACGAAGAAGAGGAAGAAACTGAAGACAATGGTGATGTCAACGATACCGTTGATGGTGAAGAAGGTAAAGAACTTGACCCTGATAAGGTTTATGTCACGAGAACCCAACAggatttcataaataaatatcgtgACGTCATTCTTCAAGTCAACACCAAACGATGCTTATGTTGCCAAAAGGAATACCCTCGCCGCAAGGCGGTTATTCAGCATTTACAGAAAAACGGTCAAAAAGTACCCAAACATACGTGCTATAACTGTGTAGTTACATTCACTCATATTGGCGCATTACTTAGTCACATGAGAGCAAACTCGTGCACAGATCTCTGGAAGGTCATTTACGACGAAAATGGTATCACAGAAGATATGGTCATTGAAGAACCTAAAACCAAGGTCCAAGCCAAAGATATTTTCAACGCACGCTCTTATGGTTGTAGGTTATGTCCGGCCAAATTCCAATTGAAGCAGTCAATCATGAAACACGTCTCTGATTTCCATGAAGATGGACAATCAGCATCACCACTTAGCTGTGTACATTGTCGAACTAACTTCAAAGATAAAAcattacttaaaaaacatatCCGCGTCGGTGAATGTACAGTAAATATTCACTGCAACGTTTGCTCTGAACAATTTTCAAACACGCAAGAATTTAACGATCATGCTATGACTGTGCATGctgatcattttgaaaaaactgAAACTGACAGTACAAATAAGTGTGTCGATGGTCGCGTTACTGATTGCCCGCTTTGTGGAAAGAAAAACAGCAATTATATCAACTTAGTAAAGCATTTGAAGATGGCTCATGACGAAGATAGGCCACACTATTGTCAAAACTGTGATGCTAAGTTTGAGCAAGCGGGTGATCTGAACAAACATATTTATACAGAACATTCTCACCAGGCATTAGGTCAGTCAGCAGAACCTGACATGTCCCTCGTAAAGGAAGAAGCGGAGGAGTATCACTACTCGTGTACAGAATGTAATGCTATATTCGAAACAGTAGATGCATGGACTGATCACCAAGTAGCCGAACACAATCAAATTGCGCACCACTGTGATcaatgtgataaaaaattccTACGTCCTTCGGAACTTGCCGAACACAAGAATACACATTTACGAGTTAAATTCTATCCTTGCAGCATTTGTTCTAACTCTTACAGCACACCGCAGAAGTTATCCGATCACGTTCAACAGGCTCACCCTGGTGCTGGCGCAAATGCGAGTGCGGAGTCGGAATTTTTCTGTGTTCATTGTATTCGATCGTTTAAGAGTCGTCAAGCTTACTCGAACCATATGCGTATACATGCCAAAGTTCCTACAACTAACAGGAAACCGAACGCTGCTGAACCAAAAGGATTCGATCCCCGTATTATTGGAAAGCCAATAAAACAAATTAGCATGGTTCAACAAGTTCAACAACAGCCCGGTTTCGTCAACTTCAAGCCAAATATTAACGTTCCTAATGCTCCGTATTCGTGTGATATTTGCGGCAAAGGATTTAtgcataagaaaaatatttggaaACATAAAAAAGTGCTGCATGCTGATATTTTAAATGACAGACACGATAGTGAGGAGAATACTATGCAGGCCTCTACCGAGGAAGATGATTTCAATGTTGACGAAAACGGGACTCTGCTCTCGACACCACAGTTCAACAGCTTTAATTTTACAAACTTGGCTAATAACACGCAACAACAGGACGCTATGCCTTTCTCTTGCGAATTGTGTTCGAAGAAGTTCCCTCTCAAGACAAGTTTGTTGAAACACAAGCGAGCTAAACATGGAATTTCGAATCCTAGTATTGTAAATGAGACACAAACGCAGCTCACCGCACCATCTAGTGAAGGCGGTAGTCGCTCGAGTTGTACCATCTGCAAAATAACTTTCCCCGACAAGAAATCCTATTATCGTCATAGAAAAAATTTCCACAAAACTGCGACTCAAATGTGTAAACTCTGTGGGAAACCTCTGAATTCCACTTTTGAACTTTATGAACATTTGAAAGCAGCTCACGCCAGGGAACTGTTGGGATACAATGCTAATCAAAGCACGAGCAAGTCTCAAGATATATCACAAGATATAGAGCTGGATTACGATAACGACCAAGATGCAGTGGACCCTAGCGTCGACTACCAAGCTAGGTATCCGTGCGATGCATGCGGTAAACAGTTTGTGGGATTACTTGCTTTACAAAACCATCAATGCGTTAATCAACTATCATCACAACCGCAAACATTTGACTGTGAAATCTGCCACAAGAGCTACACATCCATTGCCGCTTTGAAGAGTCATCGCGGTTGGCATTTACGTTCACCTGACGGCAAAGCGGCTGCTAATAATAGCGGGCTCTGGATGCCTCAGCATAAAGTGACGAGCAAGGTGAGCAAACACGAAGTGGTCGATGCCTCGCAGTTGGCTCGAGTTCAACACACAACCACTACCCCCGCTTCGGTTGCAAAAAGGAGACTTCCACCCGAGGTCGAAGTTACCGTCGTCAACCCCAATAAAAAATTACGTTCTGATGACTCAATCGAATTGGAACTACAAAACAATGATGCTATCGAGGGACGGTATTGCACGATATGTGACAAAGAATTTACTAAACGTGCTGCCTATCAACGTCACATGGACGAAGTACATCAACCGAATTCCGTGTTTTGTCCAGTATGTGACAAGAGTTTTACGCGCAAATCCACACTTATCGTACATATGAAGAAACACTACGAAACTGGCGAAGGTAGTTCTTCAACGGCGGCGCCGGACGACGATGCCTTCGCTTGTGACGTCTGCGGAGCACAATTCGACAACGAATTCACTTTGAATTCACATCGGGCGACGAATCATGCCGAGGATTCTGGAGAATCGGATGATGATGGAAATGTTCCTATCGCACAACCGGGAGAGTTTACTTGCGGTCAATGCGGTGACGGTGTCGCCACTCCCAGGGATCTGATCGCTCATCGCACAATGCACTCTACACCCACTAAATTCTTCTGTAACATCTGTAAAGTATATTTTGCTCGTGCCCTGGATCTGTCGTCGCATACGCGCGCTCGACACGCGGACAACGAAAAAGTTTTCTTCCCCTGTGCCATGTGCGACCGATTCTACATGAATAAGAAGAGTTTACAACGTCACATCGAAATGGCACACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSSDEAEPHVLATKIKDCVSVQINEDDNLPTNVCRKCMDNVNNWHIFKIVCEKTQNKLQSLIEKDGSLLEEVKIKSEPLSDEIYDDGVVIDASYAEEHSGSAKIQPEGPPILASLGLTPRSDKNYVDPRMDWHRVHAIMKMIQDNNVIDSLQNNEESDILYQSDHDSESEAELDLIDSSYNNCDQGYKCSNNQILLKYPPKIIQKGTLNKRKGKFPKNCPRPKNAWQLLFTDDLLELIVASTNENINKSASVETNVNEIKSLIGILYLHGIIRPTHQSADDLWDDEYGVPCVRNSMTLDRYKFLLSYIKFEKEENKTFFDPMRRMRTLFEMFTMNCRTAFNIDDTAVVDEVIVPVYGPCPFRYDIDKKPLRRGMKMVMLVDPSNFYVSNLDVVTDPYFKAEDIVKKVTQHLNKSGTTVIMDSWYFSNSLMNTLKECGLYTIGALNPKSEIIPPLFVSKYRKPHTFMSGFSKDNVSVTSYVNSDSKSLNVISSDPKYYRKIHKDSSTAVSDYMKNQSAVEVLDVLMHYYTTMQHTNDWTMSLFFTLLNIASINAQGVESEKDEDEEFEEESLPVPQPVKVPAMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRTYRYSHNARRHELTSHGFDRYTNKITNKRSAHTRSSHMQPKLRPNPFNPKARLMPNPISHKMQLVSKKVQPKLIPQKIITPSKPIPIKAPKGPSNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDHENDEADPEGDTNQDIEDEGDMQNNQSQNYDTLNMESDNEIEIAREQENDGEVAENNDEDNEHILPDDYNHAEEAEMDGDIDRDNDTVDSQQMEIDESYLAKRENDIKDEEDGNEEGEHEDHEQSQEGEENEYEEEPPVVPEVEMNEEMQANSYNSEANEEEEETEDNGDVNDTVDGEEGKELDPDKVYVTRTQQDFINKYRDVILQVNTKRCLCCQKEYPRRKAVIQHLQKNGQKVPKHTCYNCVVTFTHIGALLSHMRANSCTDLWKVIYDENGITEDMVIEEPKTKVQAKDIFNARSYGCRLCPAKFQLKQSIMKHVSDFHEDGQSASPLSCVHCRTNFKDKTLLKKHIRVGECTVNIHCNVCSEQFSNTQEFNDHAMTVHADHFEKTETDSTNKCVDGRVTDCPLCGKKNSNYINLVKHLKMAHDEDRPHYCQNCDAKFEQAGDLNKHIYTEHSHQALGQSAEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQQAHPGAGANASAESEFFCVHCIRSFKSRQAYSNHMRIHAKVPTTNRKPNAAEPKGFDPRIIGKPIKQISMVQQVQQQPGFVNFKPNINVPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRHDSEENTMQASTEEDDFNVDENGTLLSTPQFNSFNFTNLANNTQQQDAMPFSCELCSKKFPLKTSLLKHKRAKHGISNPSIVNETQTQLTAPSSEGGSRSSCTICKITFPDKKSYYRHRKNFHKTATQMCKLCGKPLNSTFELYEHLKAAHARELLGYNANQSTSKSQDISQDIELDYDNDQDAVDPSVDYQARYPCDACGKQFVGLLALQNHQCVNQLSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLARVQHTTTTPASVAKRRLPPEVEVTVVNPNKKLRSDDSIELELQNNDAIEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYETGEGSSSTAAPDDDAFACDVCGAQFDNEFTLNSHRATNHAEDSGESDDDGNVPIAQPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -