Istr024899.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- -
- Assembly
- GCA_951213275.1
- Location
- OX577875.1:2424314-2440628[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 43 0.00073 0.059 14.5 0.9 2 23 94 116 93 116 0.97 2 43 0.067 5.5 8.3 0.2 2 23 138 159 137 159 0.96 3 43 0.0027 0.22 12.7 0.1 1 23 163 185 163 185 0.94 4 43 0.016 1.3 10.3 3.9 1 23 190 212 190 212 0.97 5 43 0.025 2.1 9.6 0.6 2 23 219 241 219 241 0.91 6 43 0.00062 0.05 14.7 0.4 2 23 249 271 248 271 0.97 7 43 0.0056 0.46 11.7 1.8 1 23 277 299 277 299 0.98 8 43 0.05 4 8.7 1.2 1 23 305 327 305 327 0.98 9 43 2.2e-06 0.00018 22.4 0.8 1 23 333 356 333 356 0.97 10 43 1 82 4.6 1.0 1 17 398 414 398 421 0.81 11 43 0.44 36 5.7 0.4 2 23 445 467 444 467 0.91 12 43 0.0044 0.36 12.0 0.2 1 23 489 513 489 513 0.97 13 43 0.0019 0.15 13.2 0.1 1 23 517 539 517 539 0.97 14 43 0.00094 0.076 14.1 3.0 1 23 582 605 582 605 0.98 15 43 0.0014 0.12 13.5 5.4 1 23 611 633 611 633 0.98 16 43 1.6e-06 0.00013 22.8 2.1 1 23 639 661 639 661 0.98 17 43 3.3e-05 0.0027 18.7 0.3 1 23 667 690 667 690 0.98 18 43 0.016 1.3 10.3 2.1 1 23 743 766 743 766 0.95 19 43 0.0029 0.24 12.6 1.0 2 23 837 858 836 858 0.97 20 43 0.12 9.6 7.5 1.0 1 23 862 884 862 884 0.98 21 43 0.011 0.88 10.8 1.9 2 23 899 921 898 921 0.97 22 43 0.041 3.3 9.0 6.4 1 23 927 950 927 950 0.97 23 43 0.31 26 6.2 5.5 1 23 956 978 956 978 0.97 24 43 2.3e-06 0.00019 22.3 0.8 1 23 984 1006 984 1006 0.99 25 43 0.025 2 9.6 1.0 1 13 1012 1024 1012 1025 0.93 26 43 0.006 0.49 11.6 1.2 1 23 1063 1086 1063 1086 0.93 27 43 0.041 3.3 9.0 0.4 2 23 1156 1177 1155 1177 0.97 28 43 0.00057 0.047 14.8 0.5 1 23 1181 1203 1181 1203 0.97 29 43 0.023 1.9 9.7 0.2 2 23 1217 1239 1217 1239 0.94 30 43 4.9e-05 0.004 18.2 1.0 2 23 1246 1268 1245 1268 0.96 31 43 0.011 0.92 10.7 3.2 1 23 1274 1296 1274 1296 0.98 32 43 1.4e-06 0.00011 23.1 1.5 1 23 1302 1324 1302 1324 0.99 33 43 4.5e-06 0.00037 21.4 1.2 1 23 1330 1353 1330 1353 0.98 34 43 0.2 16 6.8 0.4 2 23 1444 1466 1443 1466 0.94 35 43 0.12 9.5 7.5 0.1 2 20 1489 1507 1488 1509 0.93 36 43 1.1 93 4.4 1.0 1 22 1535 1556 1535 1558 0.86 37 43 8.8 7.2e+02 1.6 0.2 2 23 1580 1602 1579 1602 0.92 38 43 0.00049 0.04 15.0 0.6 2 23 1625 1646 1624 1646 0.97 39 43 0.57 46 5.4 0.2 1 21 1650 1670 1650 1673 0.94 40 43 0.00066 0.054 14.6 1.6 2 23 1692 1714 1691 1714 0.94 41 43 4.3e-05 0.0035 18.3 2.6 1 23 1720 1743 1720 1743 0.96 42 43 0.0047 0.38 11.9 3.1 1 20 1749 1768 1749 1771 0.93 43 43 0.00011 0.0087 17.1 0.6 1 23 1777 1799 1777 1799 0.96
Sequence Information
- Coding Sequence
- ATGGAGTCTAACATCGCCAATAACAGGAAAGCGAAAGGTAAACCAAGCGCAGAGTTATTGATGGCCAGGGAAAATCTCttagcaatatttaattattcaaatGCTACTCCGATTCAATCCCAACACGCACAGAGCTTCTTCTGCTGCTATTGTAATTTTGGACACCCTAAACCCAGCCAACTGAAAACGCACGTCTTAGAATCACACATTCGATCCACGtctttcaaaagaaaaatagctATAAAAGATCTTACCGTTAAATTAGATATAACTGATCTAAAATGCACTGTTTGCGAAAAAAGCGTCGTACATCTAGAAGAATTGATGAGTCATATCAAAACTAAACATAATGTTGAAttaaatgatattaaaaatcCATTGATACCGTTCAAATTTGATGATGAGAAGCTGTCCTGCTATATTTGTTCAGCGGAATTCACAAATTTTGTGAAATTAACCGGCCATCTAAACGTGCATTATCAGAATCATATATGCGAAGTCTGCGGGGCAGGATTCATATCCCGCGGGCAGTTACAGACCCATGGCCAGGCTCACCTCACTGGAACTTTCAACTGCTCAAAATGCTCAAAGACTTTCGACACTGAGCGTAATAAAAAAAGCCATGAGAAATCTCACGATGGTAAATTACGTCGGAAATGTTTTGAATGCGACGAACGCTTTAGTACTCAGATTGCGAAAGCAAAGCATATGGTGGAGAAACACGGTGCACCAGAACTGACTGTCAAATGTCAGTATTGCAGCAAGGTGTTCGGTTACTACGAGAATATGATGGTTCACATTAAGAGAGTGCATTTAAGGGAGCGTAATCACGAATGCCCATATTGCGATATGAAATTCTTCACTATAGAAGCGAAGAAAACCCATATACAAACGCACACGGGCGAAAAGAAATTCAAATGTGATATCTGTTACAATATGTATAAAACTCAGACAATTTTAAGAGAACATCTAAAGATTCATTTCGATATACGCAGATTTAAGTGTGAAGTTTGCGATAAGAGCTTCATTCAAAAGTCTGGGTTAAAGGGACATATGTCAAGCAAACATGGATTACGCGAGCCTACCGATCGCGCGAAGATTCTAACCAGGAAGAGACAGAAAAAGGATACACTACAGAAGATAGTGGCTTATTCTAACGCAACACCCGTACTTAAATGCAAAGGAATGTTCTACTATTGTTCGTATTGCGATGAGAGATTCCTTAACCCAGAAAAACTAAAGTTTCACTCATTGGAAAGTCACCAGAatgattttatgaaattgaatTGTTTAGCCGGAGAATATATCATCAAGATAGACATCACTGATCTTACCTGTAAGCTTTGCAGTACTTTCGTCTCATCAATGCAAGAGTTAATCAAACATCTAACTGATGAACATGAGATAAAGTTTGAACCGATCGATTTTACTAAGTTCTTGATTCCTTTTAAGTTTAACGGCATGTTTCGTTGCGGGGTCGATACTTGCGACGCCTCTTTTAATACTTACCAAGGTGTTATTAAACATATGAATACCCATCTAGCAAATTACGTTTGCGAAATTTGCAACAACTCTTATTCTACTAAAGTGGGTTTAGCGTTGCACGTCAAAGgtcatactggtgaaaaacccaAGAAGGCATCACGAGTTAAGAGAATAAAATGCCCGCATTGCGATTTCGTTTCCAAACATAGTCATGGCCATGGCATTCATATGAAAGAAATGCACGGTTTGGCGACGAATTTCAAATGCACGTCGTGCGATCGCGAATTTCAGAACAGCATGCACTTACGCGTACATGTAAAGCGCGACCACTTAATGGAAAGGAACCATAAGTGTCCGTTTTGCGAGAAGAGCTTTTTCTACAGGACGAAATTGAACAATCATTTAACAACTCATACGGGGGAAAGACGATTTCAATGTCTTATCTGCGATAAaagatttaaaactaaatataacttGACGATCCATAATCGAATACATACCAACGACAAGCGATATAAGTGTAGAGTTTGTGGTAAAGCATATGCTCAGAGGAGCTGGGTTAATGCTCATATTAAATCCAAACATGGCGAAGTGGAAATTTTAGAACATTATTGCATTGAGGAAGATATGCAATgcCATCGATTGAAGTGGATATCGCTCAAACGCAAGAAAAAGGATACAGTCAAGCTGTTGGTGATGTACACAAATGCCAACCCGGTCCAAAAGATAAAAGAAATGTTTTATTACTGTAGCTATTGCGATGCCCGGTACCATAACCCAGTAAAACTAAAAGTTCACACACAAGAAAAGCATAAATACGAATTCCACAAGTACTTTTTCTCACCATCTAAAGAGTTCTTAGTCAAATTCGACATAACAAACTTAACTTGCGACCTTTGTGATGCCGAAGTGGATTCTGTCGAAGAAATTATCAAACATTTAACAAGTCAACACGAAAAGAAGTTCCCTATTGTAGATGTCAACAGTTTtctaatttcatttaaatttatagACAGTATGCTCCGTTGTGCCTATTGCGATGCCTCTTTTAATACCTTCCGAAGACTCCAGATGCATATAAACAAGCATATGGCTAATTATACCTGTGAATATTGCCAAGCCACTTACAAGGAACGGAAAATATTCATTCGCCATGTAGAAACTCATACAGACAAAGTAAGAGTAAAGCAAAAGAGGTTATACGCCTCGAAATGTCAGCATTGCGATATGAGCTTCAACtcttatgaaacaaaaatggATCATTTAAGAGTAGCTCATGGATTAGCAGTCACTCACAAATGTAACTCATGCGATCGCGTATTCACTTGTAATACCACTTTACGACGCCATGTCAAAAGAGATCACTTATTAGAAAGGAACTTCAAATGTTCTTTCTGCGAGAAAAGCTTTTTCTGCAAAGTGAAGTTAACTAACCATCTTACAGTGCATACGGGAGAACAGAACTTCCAGTGTGAAGTTTGCAACAAGCGGGTAAAGACTAAAGGGACTTTGCGGGTCCATATGCGAATACATACGGATGGCAAGCAGTATAAATGTGAGAAGTGTGGGAAAGCATTTGCTCAGAAGAAAATACCTAAACAGAAGAATACTCAAGCAACAAATCTTCAAAAAAAGGATACAGTCACGAAGATACTCAGCTGGTCTAACGCAACCCCAGTACGAAAATCTTCAGGGTTATTTTACCACTGTTCTTACTGCGACGCCAAGTTCCCTAACCCTATCAAACTAAAAGAACATACTGAGGAATTCCACAAAAatgagatagataaattcttcatCAGCCCGAGTCATAGTTTTAAGATTAATATAGATGTCACCAATTTGACTTGTCGAATCTGCAGTGGTATCCAATACTCTATTAAGGAACTTATAACTCATCTAATACAAGAACATGATAAGAAATTAGACTGTATTGATGTTAAAAAATTCGTTATGCCATTCAGATATGACGCTATGCTTCGATGTGTGTACTGCGAAGCTtcttttaatagttttaacatACTCCAAGCTCACATGAATAAACACTTAGCCAATTACTTCTGCGATATTTGCGATTCTACATACTCATCCCTTGAAGGTCTAAAACAACATATAAAGAatcatagtaaaaaaatatccgaGAAAAAGAGAACTCGTAATAACGTATGTCCACAGTGTGGTCTGAACTTCGCTACTAACACTTTAAAAGTTAAACACCTAAAAGGCGAACATGGTTTGGAGTTAAAGAAGCAATGTAATTCTTGCGAACGCTCGTTTACAAACAGCTCTCAACTTTGGGTGCATGTCAAAAGAGACCATTTAATGGAAAGAAGGTTTCAATGTAATTTATGCGATAAGTCGTTTTTTTGCAAAGAAAAGTTAGTAAACCACATAACTGTGCATACAGGAGAGCAGAAGTACCAGTGTGATGTTTGTTCTAAAGGGTTTAAATACAAGTCTAATTTGACAGTTCATAAACGTATTCATACCAATGACAAACGGTTTAAATGTCATATATGTGGGTTGGCGTACGCGCAGAACAGCTGGCTGAGGATGCATATGAAATCTAGGCATAATGAACATTGTTTCTTTATAGGCAATAAAGATAGCCTGAATCCCTATAAGCTGGCTCTACAGAAGACGGACCTACTGCAGCAAATCCTTGCGTCGTCGAACGCTAATCCTGTCAAATTCAATGGACAGTTTTACCGCTGTTACTACTGTCTTGAACAATTCCTGAGCCCGAAGAAGCTGAAGTTTCACGCTGAAGAAGATCACGCGGATGACACCATTACTCACAAACAGAGAGATAATATGGTTGTAAAACTGGACGTAACAAATCTGACTTGCAAACTATGTGGGAACTGTGTAAACTCCATCCAGGACTTAATCGAACATTTAAAGGAAGTTCACGAGAAGAAATTTCAAACTGAAGATGTATCCAAGTTAATTTTACCATTTATTTACGAAGATGGCTTAAAATGTGCCATCTGTGGTATTAGTTTATGCAATAAAGATAGCGTGAATTGGCATAAGCTGGCTCTGCAGAAAACGGACTTACTGCAGCAACTGCTTGCGTCATCAAACGCTACTCCTGTCAAATTCAATGGACAGTTTTACCGCTGTGGCTACTGCTTAGAACGGTTTATGAGCCCGAAGAAGCTGAAGTTTCACACTGAAGAAGACCACGCGAATGACACCATTACTCATAAGAAGAGAGAGAAGGTTGTAAAACTGGATGTAACAAATCTGACTTGCAAGCTATGCAAGAATATTATAAACTCAATCCAGGACTTAATTAGTCATTTAAAAGATGAACACGACAAGATATTCCAAACAGAAGATATATCTTCCTTCATTATACCATTTATTTACGAAGATAGCTTAAAATGCACTGTCTGTAATCTCAAATTAAGTAATTCTCGAAGTCTAGTTGTCCATATGAATACGCATTTCGGGAATTTCGTCTGCGATATTTGCAGTGCGAGTTATATGATACGGGACGGATTAGAGGCACATTTAAAATGTATTCATAAGAAAGAACAACGCGTTACGAATACCAAAAAAAGGGGTTATAATAGGAACTGTAAGTGTCCACATTGCGAGCTAGTATTCACTAGACTGCCGGCATTAAGACTGCATCTGAAAGAAGAGCATGGTGACGCCAAACCTTTCGCTTGTCAAACTTGTGATCGCACTTACACCAAATCCAGTCACTTATGGAGCCACATAAAGAGAGATCACTTAAAAGAACGGAAGCATAAGTGCAATTTTTGCGAGAAAGGTTTCTTTTCTAAGGACAAATTAACGAAACATTTGCCCGTACACACTGGGGAAGTGAAATACTTGTGCGATGTTTGTCCTAAAGCTTTTAAGATGCAATACAGTTTGTCCGTTCATAAAAAGACGCATGTTAATGATAAACGGGTCAAATAA
- Protein Sequence
- MESNIANNRKAKGKPSAELLMARENLLAIFNYSNATPIQSQHAQSFFCCYCNFGHPKPSQLKTHVLESHIRSTSFKRKIAIKDLTVKLDITDLKCTVCEKSVVHLEELMSHIKTKHNVELNDIKNPLIPFKFDDEKLSCYICSAEFTNFVKLTGHLNVHYQNHICEVCGAGFISRGQLQTHGQAHLTGTFNCSKCSKTFDTERNKKSHEKSHDGKLRRKCFECDERFSTQIAKAKHMVEKHGAPELTVKCQYCSKVFGYYENMMVHIKRVHLRERNHECPYCDMKFFTIEAKKTHIQTHTGEKKFKCDICYNMYKTQTILREHLKIHFDIRRFKCEVCDKSFIQKSGLKGHMSSKHGLREPTDRAKILTRKRQKKDTLQKIVAYSNATPVLKCKGMFYYCSYCDERFLNPEKLKFHSLESHQNDFMKLNCLAGEYIIKIDITDLTCKLCSTFVSSMQELIKHLTDEHEIKFEPIDFTKFLIPFKFNGMFRCGVDTCDASFNTYQGVIKHMNTHLANYVCEICNNSYSTKVGLALHVKGHTGEKPKKASRVKRIKCPHCDFVSKHSHGHGIHMKEMHGLATNFKCTSCDREFQNSMHLRVHVKRDHLMERNHKCPFCEKSFFYRTKLNNHLTTHTGERRFQCLICDKRFKTKYNLTIHNRIHTNDKRYKCRVCGKAYAQRSWVNAHIKSKHGEVEILEHYCIEEDMQCHRLKWISLKRKKKDTVKLLVMYTNANPVQKIKEMFYYCSYCDARYHNPVKLKVHTQEKHKYEFHKYFFSPSKEFLVKFDITNLTCDLCDAEVDSVEEIIKHLTSQHEKKFPIVDVNSFLISFKFIDSMLRCAYCDASFNTFRRLQMHINKHMANYTCEYCQATYKERKIFIRHVETHTDKVRVKQKRLYASKCQHCDMSFNSYETKMDHLRVAHGLAVTHKCNSCDRVFTCNTTLRRHVKRDHLLERNFKCSFCEKSFFCKVKLTNHLTVHTGEQNFQCEVCNKRVKTKGTLRVHMRIHTDGKQYKCEKCGKAFAQKKIPKQKNTQATNLQKKDTVTKILSWSNATPVRKSSGLFYHCSYCDAKFPNPIKLKEHTEEFHKNEIDKFFISPSHSFKINIDVTNLTCRICSGIQYSIKELITHLIQEHDKKLDCIDVKKFVMPFRYDAMLRCVYCEASFNSFNILQAHMNKHLANYFCDICDSTYSSLEGLKQHIKNHSKKISEKKRTRNNVCPQCGLNFATNTLKVKHLKGEHGLELKKQCNSCERSFTNSSQLWVHVKRDHLMERRFQCNLCDKSFFCKEKLVNHITVHTGEQKYQCDVCSKGFKYKSNLTVHKRIHTNDKRFKCHICGLAYAQNSWLRMHMKSRHNEHCFFIGNKDSLNPYKLALQKTDLLQQILASSNANPVKFNGQFYRCYYCLEQFLSPKKLKFHAEEDHADDTITHKQRDNMVVKLDVTNLTCKLCGNCVNSIQDLIEHLKEVHEKKFQTEDVSKLILPFIYEDGLKCAICGISLCNKDSVNWHKLALQKTDLLQQLLASSNATPVKFNGQFYRCGYCLERFMSPKKLKFHTEEDHANDTITHKKREKVVKLDVTNLTCKLCKNIINSIQDLISHLKDEHDKIFQTEDISSFIIPFIYEDSLKCTVCNLKLSNSRSLVVHMNTHFGNFVCDICSASYMIRDGLEAHLKCIHKKEQRVTNTKKRGYNRNCKCPHCELVFTRLPALRLHLKEEHGDAKPFACQTCDRTYTKSSHLWSHIKRDHLKERKHKCNFCEKGFFSKDKLTKHLPVHTGEVKYLCDVCPKAFKMQYSLSVHKKTHVNDKRVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -