Istr013229.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- -
- Assembly
- GCA_951213275.1
- Location
- OX577858.1:11514116-11515729[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-07 5.2e-05 23.5 0.0 2 40 16 53 15 57 0.93
Sequence Information
- Coding Sequence
- ATGGTGCGAAATCGTAAGAGGAAGACGGATTATGGTCTTCACAGTGAAAAAGATATGGCAGAAGCGATTTTGATGGTTGAAAGTGGTGTTAGTCTTCGAAAAGCAGCAAATGAAAAGCACGTTAATTTTATGACATTACAAAGATATGttcagaagaagaaaaaatgttCGGAGCATGAAGCCGGAAACATACGGCTTACTCCAAATTATGCCAATAGAGTGGTATTCAGTGACGATCAAGAAAAGGCGTTGCAGGAGTATTTAGTAAACTGTTCTAAGATGTGTTATGGTCTAGATACGATTGAATGCCGAAAGCTTGCTTACGAGATGGCTgtttactataatttaaatatgccTAAAAACTGGGAGGATAAGAAGATGGCAGGAATTGATTGGCTCTATGGGTTTAGAAAACGGCATACTGACTTAACATTAAGAAAACCGGAACCTTGTAGCTTGACACGGGCAACATCATTCAATCGTCACAATGTGAATGTATTCTTTGATAATTTGCAAGATGTTATGCAGCGATGTCCTAGTTTTGCAGATGGTAGTAGAGTGTATTGTCTAGATGAAACTGGGACCACTACCGtccaaaaacccaaaaaaatcaTTGCAGCGAAGGGAGCTAGACAGCTAAATAAAGTAACCAGTGCCGAGAGAGGAACACTAGTTACCACATGTTGTATAGTATCTGCAACAGGATCTTCAGTACCTCCAGCAATGGTGTTCCCTAGAAAGCAGTTCAAGTCTTTCATGCTCAATGGTGCACCAGTAGGAACCCTAGGTTTAGCTCAATCCACCGGATGGATGAACAGTGAATTGTTTCCAGAAGTCATGAAACACTTCGTAAAGGTAACAACCTCTTCAAAAGAAAACCCATCCTTACTGATAGTTGACAATCATGATAGCCACCTAGCACCTGCAGTGTTAAATATAGCAAAAAACAACGGAGTTACCCTACTAACTATACCACCACACTCAAGTCACAGATTGCAGCCACTTGATGTGTCAGTATTTGGCCCTCTGCAAACATATTACAACGCAGCAATGGATTCCTGGTTGATGCGTAACCCTGGAAAGACCATCTCCATCTACAATGTTGCTGAGTTGTTAGGACAAGCTTTTGATAGAGCCATGACACCCTCAAACATCAAATCAGGATTCCGAAAAACTGGTATTTTTCCGTTTGACAGACACATTTTTACTGACAATGATTACATGCCAAGTGAAGTTACAAATCGGCCACTCGAAGACCTTTCTAATGTTCCCGGTTCCAGTCAACGTTATGAAACTCAACAAGCTTCTACTGATGGCCCTAGTTCAAGTCAATCTTTTCAGCAGGGTGATGTTATCGATCCAATACCAAATCCATCTTCGATAGTTCAGGCGCCATCTTCTCCTAATCGGCAAGTGATGCAGAGACGTTCTGAATCCGTGAGCCCAAGTTTGCTAACTCAACTTGTGGAAGCGCCATCCGCAATGACTAAAGAAAACTTTTCAGTCATAACTTTGCCTTCTACTCCAGATAAAACACTAGTTTCTCCTATAGGATGTCGAGCTTATCCAAAAGCGCAACCGAGACTTTGTAGTCTCGGTTGCGCTTTTGGATAA
- Protein Sequence
- MVRNRKRKTDYGLHSEKDMAEAILMVESGVSLRKAANEKHVNFMTLQRYVQKKKKCSEHEAGNIRLTPNYANRVVFSDDQEKALQEYLVNCSKMCYGLDTIECRKLAYEMAVYYNLNMPKNWEDKKMAGIDWLYGFRKRHTDLTLRKPEPCSLTRATSFNRHNVNVFFDNLQDVMQRCPSFADGSRVYCLDETGTTTVQKPKKIIAAKGARQLNKVTSAERGTLVTTCCIVSATGSSVPPAMVFPRKQFKSFMLNGAPVGTLGLAQSTGWMNSELFPEVMKHFVKVTTSSKENPSLLIVDNHDSHLAPAVLNIAKNNGVTLLTIPPHSSHRLQPLDVSVFGPLQTYYNAAMDSWLMRNPGKTISIYNVAELLGQAFDRAMTPSNIKSGFRKTGIFPFDRHIFTDNDYMPSEVTNRPLEDLSNVPGSSQRYETQQASTDGPSSSQSFQQGDVIDPIPNPSSIVQAPSSPNRQVMQRRSESVSPSLLTQLVEAPSAMTKENFSVITLPSTPDKTLVSPIGCRAYPKAQPRLCSLGCAFG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425002; iTF_00375138; iTF_01388407; iTF_01246812; iTF_01333747;
- 90% Identity
- iTF_01425002;
- 80% Identity
- -