Istr024522.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- clz9
- Assembly
- GCA_951213275.1
- Location
- OX577874.1:3999877-4001787[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-07 3.9e-05 23.9 0.0 5 38 36 68 34 72 0.89
Sequence Information
- Coding Sequence
- ATGGGAAAACCTAAAGGAAATCGAATTaaggagAAGTCAAAGAAAAAACATTCCAGAATAATTGAAAAATCTTCCAAAAAGGAAAAACCATATAATGCTTCTAGTCTAAAAGCCGCCGTCATGGAGGTTAAAAATGGGACCACAATCTACAAAGCTGCAAAGAAATTCAGTATTCCATGGAGTACACTAAAATCATACTGTTCTCGCTATGATAAAGACCATACAACATCTCAACTAAAACGTGGAAAACCTTATGTAATGCCCCCCAATATCGAGATCGAcctattacattacattaacaAAATGCAAGAAATTGGGTTTGGGTTAACAGTGAAACAGGTGCGAGTTGTTGCATACCGCTTAGcagaaagaaacaaaattaaacaccCATTTTCAAAGACAAAGCAAAGTGCTGGATGGTACTGGTGGTCATCGTTTAAGAAACGTTATAATTTAAGTTTGAGAACACCTGAGAGTTTATCTATGAGTAGAGCCCAGTCAGGAACAAGAGAAAATTTAAATGACTTCTATAGAATGCTTGAAGAGCTGTATAAGAAGCTGGGAGTACACGATAAACCACAACGGATATGGAATTTAGATGAGACCGGTTTTATGTTTGTTGTAAGGTCAGGCAAAATTGTAACTTTAACGGGTAAGACCCacgtttacaaacaaacatttggAGAAAGAGGAACGACAACTACAGTGTTGCCCTGTGTGAATGTTACCGGTGATGCTGTTCCGCCAATGATCATTTTTAAAGGAAAGCGATGGGATGACAGGTTGAGGAGTGCCAATTTTCCATGTGTTATAAAATTGAGTGAAAAAGGTTGGATAAACAATGACCTATTCCTGGAGTTTTTTAagcattttatagaaaatattccaatagcGAGGCCAGTTGTTCTGTTAATGGATTCCCATAAATCGCACCTGGGTCCAGAAGTACTGGAGCTTGCTCAGAAGGAGCAAATTTACATCACAACCTTTCCTCCACATTTGACGCATTTACTTCAACCGCTAGATGTGGGGATCTTTGGCCCACTTAAAGCAAAGTGGAGAAACCACTTGGACCAATTTCAAGTAAATCAACCTGGAGAAAAACCAACTcgctatgactttttgaaaatgttttcttCAGCTTACaatgaaacattaaataacagaTCATTAGTAACAAAAGCGTTTGCGAAGGCGGGCATTTTCCCTATAAATTTTAATGCCATTCCTGATCATGCAATTGCCCCCTCTCGAGTCACTGAGATTACAGGTGATAGTGGTGGTACGGCTGAAGATGTTTGTGCAGTTGCCCCGTCCACCTCCGCAGTCACTGAGATTACTGACAACGGTGGTGCAACAACTGAAGATGTGTTAAAAATTCCAAAAGCAAAAGAGAAACGAAGCAAGAAATCTACAAAGGCAAAAGGAGGCAAGGTTTATGGACCTGGCAGCAGCCTATGTGAATCGCAGTTTACTGGGGACACTCCAGAGCCAGTTCGGGATGTAAACATCTGTGGAACCTGTAAACTTAATTTTGCACGTGatgttaaacttaaaaatggtGCGGAGTGGATCGAATGTCAATTTTGCAAGACATGGTATCATGTTAAGTGCCAAAATGTTTTAAATCCAACATTTTTTCTTTGTTCCAACTGTGAACTTTCtgattaa
- Protein Sequence
- MGKPKGNRIKEKSKKKHSRIIEKSSKKEKPYNASSLKAAVMEVKNGTTIYKAAKKFSIPWSTLKSYCSRYDKDHTTSQLKRGKPYVMPPNIEIDLLHYINKMQEIGFGLTVKQVRVVAYRLAERNKIKHPFSKTKQSAGWYWWSSFKKRYNLSLRTPESLSMSRAQSGTRENLNDFYRMLEELYKKLGVHDKPQRIWNLDETGFMFVVRSGKIVTLTGKTHVYKQTFGERGTTTTVLPCVNVTGDAVPPMIIFKGKRWDDRLRSANFPCVIKLSEKGWINNDLFLEFFKHFIENIPIARPVVLLMDSHKSHLGPEVLELAQKEQIYITTFPPHLTHLLQPLDVGIFGPLKAKWRNHLDQFQVNQPGEKPTRYDFLKMFSSAYNETLNNRSLVTKAFAKAGIFPINFNAIPDHAIAPSRVTEITGDSGGTAEDVCAVAPSTSAVTEITDNGGATTEDVLKIPKAKEKRSKKSTKAKGGKVYGPGSSLCESQFTGDTPEPVRDVNICGTCKLNFARDVKLKNGAEWIECQFCKTWYHVKCQNVLNPTFFLCSNCELSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837474;
- 90% Identity
- iTF_00837474;
- 80% Identity
- -