Istr023090.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- -
- Assembly
- GCA_951213275.1
- Location
- OX577872.1:1209445-1226635[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.7e-09 2e-06 28.0 0.0 1 33 8 39 8 46 0.94 2 3 8.2e-10 2.4e-07 31.0 0.0 1 40 272 311 272 316 0.89 3 3 1.5e-10 4.3e-08 33.4 0.0 1 42 768 809 768 812 0.92
Sequence Information
- Coding Sequence
- aTGGCtccgaaaaaaaattacacccCTGAACAAATGGGGAATGCTATTGAGGCAGTGAGAAATGGAATGAAGGTTTCCGAGGCTGCGCTTAAGTTTGGCGTCCCGCGAATTactctatttaataaaattactgGAAAAAGTCCTATTGACTGTGCAATGGGACCAAAAACTGTATTATCGAAGTGTGAAGAAGACATATTAGTGAAATGGTTGATAGCAATGGGGGAAAGACATTTCCCAATTAACAGGGACTTGTTGAAAGAAAGCGTACAAAAAATTTTAACCGAGCAAGGAAGACCTAATCCATTCACTAACAATAGGCCTGGGAAAAAATGGTTTCAATCATTCTTGAAACGGCACCCTGAAATATCAGAAAAAACCACACAAAGTCTTACAAAAGCGCGAGATGACGTCAGCGAAGAAAATATTCGGAAATGGTTTTCTGAAATAGAGTCATATCTGGAAGAAAAAGAATTAAAAGACGTTTTATCGGAGCCAGTTCGTATATTTAACACAGATGAAAGTGCATTTTTTCTTTCCCCAAAAGCAGGTAAAGTCCTTTGCAAGCGAGGTGAAAAGCATCTTTATAACTTTTGCGGTGacgaaaaagaaaatttaactgTGCTTTTGACCGCGAACGCCGCTGGAACATTAGCACCACCTATGgttgtttttaaatatgaaagAGTGCCTGGTCATATAGCCGCCAGTGTCCCTGATGACTGGGGTATTGGCAAGTCGGAGTCAGGATGGATGTGTGGAAGCACATTTTACGAGTACAtaacaaacatatttaatcCCTGGTTTGCTTATAGTGAAGAAGCACTGACAAGCGCTCTTTCAGATATACGCGGCAATATTTGCAGCATCAGAGAAGCATGCCGGAAGTACGGAGTTCCAAGATCCACTATACAGGACAGGCTATCCGATCGTGTTGCTGATCAAAGAAGAAAAGTTGGTCCAGACCCTATATTTGGTATTGATGGAGAAAAGAAAATCGTTGACTGGATAATTCAGTTGGCAAAAGCCGGAATTCCAATCAACAAATATGACCTTCTAAATACAGTGGCTGAGCTTGCAAAAGAACTGGGCATAGACTATCGCTTTCCAGGAGGTAAGCCTGGTATACGATGGATTCTTAGCTTTCTCAAACGCCATCCAAACGTAAGCATCCGAGAGCCAGAAGCTATTAATAAGGCGCGAGAAGCCATCAAGGAAAGTTCAATTCGAAAATGGTTTGCAGACTTACACGCTTTCTTGGTTGAACGAAATGCATTAGATATATTAGATGATCCGAGTCGTATTCTAAACGCTGATGAAACTGGTGTTTCATTGTCTCCTAAATCAGGGAAGGTTCTAGCTCCTAAAGGCTATAAAAATGTATACGTTGTCAAGAAAGGCAATGAGAAGGAGAACATAACAGTGCTGGTGGTAATTACTGCATCTGGGGAAATATGTCCGCCATTAGTGGTGTTCCCATACAAAAGACCACCTAAAGCAGTCGTCGACAACATGCCGCCTGATTGGATTTTGGGGAATACGGAGTCTGGCTGGATACGTTCGGATACATTTTTCGAGTACATGTCTAACGGGTTCAACGGTTGTCTCAcggaaaaaaaaggtGAAATAAGATTAGCCTCGTTTGTTGCTGAACACAATCTACCATTCACTATTATGGAGCACCTACCGAAGCTGATGCAAGCTGTTTGTCTTGATTCAAAAATagcaaaagaaataaaatgctCTTCGACCAAAACTCACGACATAATTGATCATATTATAGGTAAAGAAAGTTTCGATAGTTTATGTGAAGATTTGCGGCAAACTGACCCTAGTGGACTCGTGTACAGAGTCCACATGTATAAAGGGTCAGCAGACAGTGAAggCACGGCCAACACTTTGTCTCTAGAATCGTTTAGAGACAAAGTGTTGGTCGAGCTTCTTCCGCCTCCTCCAGCATCGAGAAACATTCCTCCGCAATTCCCTACCCACATGCCAGAAGAACTGGAAAGAAACCAGAACGGCCAAATAATGCGGAGGAAATGTTTCCGATGctggaataaattaaaaaaaaagaaaagaaagcgGCATGCATTGCCCAGATTGTACAAAAGCTTTGTGCCTTGCTTGCTACGGTCCATACCACAAGGAAAACAATTTGCTACCATAACGGTAGCAAACTGTCTCCCATACCGTAGCATGCAAGGCACAAAGCAAAGGAAAACCATTTGCAAGCAAATATGCAAGCAAATTGTTTTCCTTAGGCTGTCTGTCCACAGGAGCGTAGCAAGGTTTGCTTATAGTGAAGAAGCACTGACAAGCGCTCTTTCAGATATACGCGGCAATATTTGCAGCATCAGAGAAGCATGCCGGAAGTACGGAGTTCCAAGATCCACTATACAGGACAGGCTATCCGGTCGTGTTGCTGATCAAAGAAGAAAAGTTGGTCCAGACCCTATATTTGGTATTGATGGAGGAAAGAAAATCGTTGACTGGATAATTCAGTTGGCAAAAGCCGGAATTCCAATCAACAAATATGACCTCCTAAATACAGTGGCTGAGCTTGCAAAAGAACTGGGCATAGACTATCGCTTTCCAGGAGGTAAGCCTGGTATACGATGGTTTCTCAGCTTTCTCAAACGCCATCCAAACGTAAGCATCCGAGAGCCAGAAGCTATTAATAAGGCGCGAGAAGCCATCAAGGAAAGTTCAATTCGAAAATGGTTTGCAGACTTACACGCTTTCTTGGTTGAACGAAATGCATTAGATATATTAGATGATCCGAGTCGTATTCTAAACGCTGATGAAACTGGTGTTTCATTGTCTCCTAAATCAGGGAAGGTTCTAGCTCCTAAAGGCTATAAAAATGTATACGTTGTCAAGAAAGGCAATGAGAAGGAGAACATAACAGTGCTGGTGGTAATTACTGCATCTGGGGAAATATGTCCGCCATTAGTGGTGTTCCCATACAAAAGACCACCTAAAGCAGTCGTCGACAACATGCCGCCTGATTGGATTTTGGGGAAATCGGAGTCTGGGTGGATACGTTCAGATACATTTTTCGAGTACATGTCTAACGGGTTCAACGGTTGTCTCAcggaaaaaaaagCAGATGTAAGTGTATTCAAACCATTGAAACAAGAATGGAAGCGCACCGTAAAAAATTGGCAGAGTCAAAACAAAGCCAAAACATAA
- Protein Sequence
- MAPKKNYTPEQMGNAIEAVRNGMKVSEAALKFGVPRITLFNKITGKSPIDCAMGPKTVLSKCEEDILVKWLIAMGERHFPINRDLLKESVQKILTEQGRPNPFTNNRPGKKWFQSFLKRHPEISEKTTQSLTKARDDVSEENIRKWFSEIESYLEEKELKDVLSEPVRIFNTDESAFFLSPKAGKVLCKRGEKHLYNFCGDEKENLTVLLTANAAGTLAPPMVVFKYERVPGHIAASVPDDWGIGKSESGWMCGSTFYEYITNIFNPWFAYSEEALTSALSDIRGNICSIREACRKYGVPRSTIQDRLSDRVADQRRKVGPDPIFGIDGEKKIVDWIIQLAKAGIPINKYDLLNTVAELAKELGIDYRFPGGKPGIRWILSFLKRHPNVSIREPEAINKAREAIKESSIRKWFADLHAFLVERNALDILDDPSRILNADETGVSLSPKSGKVLAPKGYKNVYVVKKGNEKENITVLVVITASGEICPPLVVFPYKRPPKAVVDNMPPDWILGNTESGWIRSDTFFEYMSNGFNGCLTEKKGEIRLASFVAEHNLPFTIMEHLPKLMQAVCLDSKIAKEIKCSSTKTHDIIDHIIGKESFDSLCEDLRQTDPSGLVYRVHMYKGSADSEGTANTLSLESFRDKVLVELLPPPPASRNIPPQFPTHMPEELERNQNGQIMRRKCFRCWNKLKKKKRKRHALPRLYKSFVPCLLRSIPQGKQFATITVANCLPYRSMQGTKQRKTICKQICKQIVFLRLSVHRSVARFAYSEEALTSALSDIRGNICSIREACRKYGVPRSTIQDRLSGRVADQRRKVGPDPIFGIDGGKKIVDWIIQLAKAGIPINKYDLLNTVAELAKELGIDYRFPGGKPGIRWFLSFLKRHPNVSIREPEAINKAREAIKESSIRKWFADLHAFLVERNALDILDDPSRILNADETGVSLSPKSGKVLAPKGYKNVYVVKKGNEKENITVLVVITASGEICPPLVVFPYKRPPKAVVDNMPPDWILGKSESGWIRSDTFFEYMSNGFNGCLTEKKADVSVFKPLKQEWKRTVKNWQSQNKAKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -