Idim024178.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Idaea dimidiata
Gene Symbol
nfxl1
Assembly
GCA_949358125.1
Location
OX442342.1:349373-351844[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1 3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.0052 1.6e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 1.5e-07 0.0047 17.7 15.9 3 19 186 202 185 202 0.95
4 20 4.3e-08 0.0013 19.4 13.6 3 19 239 255 237 255 0.92
5 20 0.2 6.1e+03 -1.9 1.7 6 10 280 284 279 284 0.90
6 20 2.5e-09 7.4e-05 23.4 11.3 1 19 290 308 290 308 0.99
7 20 1.4e-06 0.041 14.6 20.1 3 19 345 361 337 361 0.86
8 20 1 3e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 20 2.1e-07 0.0062 17.3 17.0 1 18 395 412 395 413 0.97
10 20 1.7e-07 0.0052 17.5 16.1 1 19 422 440 422 440 0.96
11 20 1 3e+04 -4.3 1.5 5 10 468 473 468 473 0.66
12 20 0.0001 3.1 8.6 6.4 9 19 488 498 486 498 0.89
13 20 0.001 31 5.4 8.6 1 12 508 518 508 518 0.96
14 20 0.15 4.5e+03 -1.5 3.5 14 18 547 551 547 552 0.87
15 20 0.13 3.9e+03 -1.3 0.1 7 11 567 571 567 573 0.87
16 20 7e-05 2.1 9.2 5.2 1 11 588 598 588 599 0.97
17 20 0.78 2.3e+04 -3.8 1.7 15 18 613 616 613 617 0.87
18 20 2e-05 0.6 10.9 13.6 1 18 628 645 628 646 0.88
19 20 1 3e+04 -6.5 3.4 9 13 652 656 652 656 0.71
20 20 3.1e-06 0.093 13.5 10.4 1 18 687 705 687 706 0.86

Sequence Information

Coding Sequence
ATGGCGAGACGATATCGCGACGCAGCTGCAAAATTACAGCAAAACGTGCAAAAACATTTGAAGGAGATGAAGGACCTTTCGTCGTCAGAAGATGAAGAACCATTCGAGTCGAGCTTGCTGGATGGAGTATTCCAGAGCTACTGGCAAGGTGGTGGAGACACCCACATGCTGAATAGAACTAAAAATCTACTGGAAGAAGCAATCAGTGGTCGTTCAGTCAGCTGCCTCATTTGCATCGCCTCTATCAAACGAAACCACGCTATCTGGACCTGTGACCACTGCTTCTCATATTTCCACTTGTCTTGTATACAAAAATGGGCGAACGACAGTATCAGTCTACGTACCGAACAGCCACAAGCACCCATTGCAGTGTATAAACCTTTAAAAGTCGAGTGGTGTTGTCCAAAATGTCGTAATTCGTATAGCAAAGATCAGATACCTCGAAAGTACAGGTGTTTTTGTAGTAAAACAGATGATCCACCTGTCCATCCTTGGTTAATTCCCCACACTTGTGGAGAAGTCTGCGGGAAGAGGCTGTCTACAGGGGACAGCTGTAAACACAAGTGCTTGTTGCTATGCCACCCAGGCCCATGCCCACCCTGCCCACAGACTGTTAATGGAGTGTGCTACTgtcagaaagaaagaaagaaggtTCGATGCAGCACTGCCCAATGGTCCTGCGGGCAACAGTGCAATAAAACTCTGATCTGTAAGACTCACAAGTGTGAAAACATCTGTCACAATGGAGAGTGTCCACCTTGCAGCTACACAAGTACTCAACCTTGTCAGTGTGGTACCGAGAAGTCAAAACGACCATGCAATGACCCTAACTGGCAGTGCCAGAGGGTCTGCAACAAGCCATTTTCCTGTGGCTATCACAAATGCGACGTTATATGCCATTCAGGAAGTTGTGGGAGTTGCCCCAACTCTGGAATGAGATCCTGCCCTTGTGGAGTTAATCAGAGATATGTCCAATGTCCTGATGTGATGGAAACCTGCCTCGGAACATGTGGTAAAAAGCACGAGGACTGTGAGCACAACTGCCCTGAGAAATGCCACAAAGGACCATGTCCACCATGTCAGGTTCTTATTCACAAGAAATGTCATTGTTCAACTCATACTCGATCACTCCCCTGCAGCAAAGATTTCAAATGTGAGACCAAATGTAGAGGCATCAGGCCATGTGGCAAGCATAGCTGTGCAAGAAAATGTTGCAATGGGAACTGCCCACCTTGCGAAAAGACATGCGACAAGTCACTCCAATGCAATCGACACAAATGCACTAATGTTTGTCACCATGGACCTTGCTACCCTTGCCCTTTGGAATCAAAGATCCCTTGCAGATGTAAAGAGACGTACATAACTGTCCCATGTGGAAGAGAAAAGTTTGCAAAACCACCAAAATGCAATCATCCTTGCAGAATCAAGTATAAATGTGGTCATGTAGAAGAGAATAAGCATTCATGTCATTTTGGTGATTGCCCACCTTGCAAAGCTGTTTGCTacaaaaagtatattaaatgTGGCCATGAATGCAAAGCCACATGTCATGAGTATGTGCCAGTTGTCTTCAAACAGGTGGAAAAGCCAGCAACGCCTTGGGAAGTCCAACCACCGAAGACAAAAATAATGACTCTTGACTGTCCACCATGTAACATGCCTGTTTCCATAATCTGCTTTGGGGAACATGAGACTGACGAGCAGCCCTGTCACATGGCAGCACGCAGACCTTGCGGGCGGGAATGTGGTAAACCACTTTCCTGTGGAAATCATGGCTGCTCCCTTCTCTGTCATTTATACAAGTCAGATGCAAATTACCCGGAAGTGCCTTATGTTTGCAAGCCTTGTAACCGAGACTGTATGAAATCCCGTCCAGAGAAATGTAGCCATAAGTGTTCAATACGGGCATGCCACCCTGGAGAATGCCCACCGTGTGAGCTTATAGAGCGGCTCCCGTGCCACTGTGGAGTCACCGAGCTCTACCTAAGATGCCGTGACCTGACAACAGCAACTGCAGAAATGTTGTCCTGTAAACAGCAATGCCCTAAGAACTTGGAATGTGGGCATCGTTGTCGAAACCTCTGCCATTCAGGCACATGCTCCAACCAAGTGTGCACtcgaaaaactaaaatatactgCCCTTGTGGCAGCATTAAAAAGGAAGTTCCTTGCAATTTGGTTCAAAATAGCGAAGCGAAAATCACTTGCGATGAAAACTGTGCAGCTAAACAAATAGCTGCCAAACTGGAGAGTGAGAAAGAGCAACAGAGATTGAAGCAGTTAGAAGAAGAGAGAAATAGAAAGGAACTGGCTGAATACGAACGCAAGTTTAGCGGGAAAAAGAAGAAGTATAAAGAAAAGAAGGTTGTGGTTAATAAGGATGATAGGTCCTGGTTTAAGAGATATTTGGTTCCTATTTTGTCgctattgtttgtttttctagcggctgtatattatgttttgtatGTGTAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEEPFESSLLDGVFQSYWQGGGDTHMLNRTKNLLEEAISGRSVSCLICIASIKRNHAIWTCDHCFSYFHLSCIQKWANDSISLRTEQPQAPIAVYKPLKVEWCCPKCRNSYSKDQIPRKYRCFCSKTDDPPVHPWLIPHTCGEVCGKRLSTGDSCKHKCLLLCHPGPCPPCPQTVNGVCYCQKERKKVRCSTAQWSCGQQCNKTLICKTHKCENICHNGECPPCSYTSTQPCQCGTEKSKRPCNDPNWQCQRVCNKPFSCGYHKCDVICHSGSCGSCPNSGMRSCPCGVNQRYVQCPDVMETCLGTCGKKHEDCEHNCPEKCHKGPCPPCQVLIHKKCHCSTHTRSLPCSKDFKCETKCRGIRPCGKHSCARKCCNGNCPPCEKTCDKSLQCNRHKCTNVCHHGPCYPCPLESKIPCRCKETYITVPCGREKFAKPPKCNHPCRIKYKCGHVEENKHSCHFGDCPPCKAVCYKKYIKCGHECKATCHEYVPVVFKQVEKPATPWEVQPPKTKIMTLDCPPCNMPVSIICFGEHETDEQPCHMAARRPCGRECGKPLSCGNHGCSLLCHLYKSDANYPEVPYVCKPCNRDCMKSRPEKCSHKCSIRACHPGECPPCELIERLPCHCGVTELYLRCRDLTTATAEMLSCKQQCPKNLECGHRCRNLCHSGTCSNQVCTRKTKIYCPCGSIKKEVPCNLVQNSEAKITCDENCAAKQIAAKLESEKEQQRLKQLEEERNRKELAEYERKFSGKKKKYKEKKVVVNKDDRSWFKRYLVPILSLLFVFLAAVYYVLYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
iTF_00836187;
80% Identity
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