Idim019293.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- -
- Assembly
- GCA_949358125.1
- Location
- OX442337.1:12257824-12264976[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.6e+02 3.7 0.3 1 23 49 72 49 72 0.94 2 20 0.00097 0.079 14.2 0.2 1 23 79 102 79 102 0.98 3 20 0.0029 0.24 12.7 0.8 2 23 201 222 200 222 0.97 4 20 2.3 1.9e+02 3.5 1.4 1 23 228 250 228 251 0.94 5 20 0.19 16 6.9 3.4 2 22 472 492 471 492 0.95 6 20 5.4 4.4e+02 2.4 0.4 1 20 591 610 591 613 0.70 7 20 1.2 94 4.5 0.5 2 23 748 769 747 769 0.95 8 20 0.011 0.91 10.8 0.7 3 23 846 866 844 866 0.97 9 20 0.034 2.8 9.3 0.5 1 23 874 896 874 896 0.97 10 20 0.14 11 7.4 3.4 1 23 936 958 936 958 0.95 11 20 0.00027 0.022 15.9 4.0 1 23 966 988 966 988 0.99 12 20 0.26 21 6.6 2.1 1 23 1070 1092 1070 1092 0.98 13 20 4.4 3.6e+02 2.7 0.8 1 23 1147 1169 1147 1169 0.95 14 20 0.048 3.9 8.8 0.5 2 23 1176 1197 1175 1197 0.97 15 20 0.028 2.2 9.6 1.8 1 23 1264 1286 1264 1286 0.93 16 20 0.015 1.2 10.5 1.1 1 23 1292 1314 1292 1314 0.96 17 20 0.0074 0.6 11.4 2.6 1 23 1404 1426 1404 1426 0.97 18 20 0.00019 0.015 16.4 1.4 1 23 1432 1454 1432 1454 0.99 19 20 0.34 28 6.2 2.1 1 23 1547 1569 1547 1569 0.96 20 20 0.00095 0.077 14.2 3.9 1 23 1580 1602 1580 1602 0.98
Sequence Information
- Coding Sequence
- ATGCCCTCATCGCTTAGCACGCTACTCATCGAGGACATTACTAACGCGCGCCCGTTTCCACGACGTTCCTTAAAAGATATCTTATCGGATACGTCTTCGAACGCAGAATGTTTTGAACTTTCGCAGCGCGAGATAACGCAGAGTTATAATTGTGATAAGTGCAAGTTTCGAGCGGACAATCTTCGTGCTTATCTCTGGCACGTTCGCGAGGTACATTTTggattgtttaaaatttatgagtGCCCGAGTTGTTTATACGCTACGACTGAGCAATACGAGCTTTTGAGACATATGCGAATGCTTCACGAAGAAACGTCTTTACTTCCTAATAGAATGGACGCTGATATTTATGATAATAATGCCGATAATTCGGAGCGAATGGAAGATTTACTGGAAGAAATAGAAGAATGCGACGATTCCCCGATGGAGGAAGAGAGTCGAGACGAGCAGCCAGAAATTGACGAAGCCGTCAACGAACCCCGTACCTCCAGTGGTGCAAAGGCCAAAGGAAAGTTCTTTTCATGCGACAAATGCCACTACGTTACTCACATAAAAGCGAGGTACACAAAACACGTCAAGTACCACTCAATGCCTATGATAAAGTGCACAATATGTGAATTTCGCACGCCATACAAATGGAACTTGGATCGTCACATGAAGAACCACGGTGGGAGTGGAAGTTTCGTGTGTTCGAAGTGTTCCTTCACAGCGGACATCAAGCAGAGTCTGACAGTGCACGAAATGAATCACCACATGCCGCCCATCGGTCATTGGGTCGCGTGTCGTCGTCGCAACCGGGTGGGTGCCAGCGACTTGGCAGCCGCGGAGCCGGTACTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGCTCCTCTCACTCGGCCTCGGATGCAATGGGACTCCATAATCATGAAAAAGACATAGTGAGTTGCAACAGTGACTCTAATGAAGCACCATCTTCACAAACAAACAGAGATGATTTACCATCAGGCCAAATGTCACCAAACTCCGGAAACGAAGAcagaaaaaacaacaaaagagCACCTCGGCCTATACCACAACTAATACCATTAAACGCTTCTACACCAAACCAAAACAAATCCGGCGAACCACCggctaaaaagtttaaagaatcTTCAGACGCAAGTAAATTTGAATCATTGCCAGACGATATTTCTTTAATACCAGTCAACGCTCCAAAAGAAACTGCAGTGCGcaagaaaaataattcattCTTCGACAAATTAAAAGAGCGGCTCCTAACGGAAACTGGTAAAGAAGGTTCGCTAAAATGCAAAAATTGCGGGTTCGAAAGCAAATGTTTGTCGGAACACTCGGTTCATGAGAAAAACTGCACAGCTCAATCTAATCGAGTCATGTTGAACACTGCGCTTCCGAGCATGGGCTCTACCCGTTGCCAAAACTGCAGACACAGATGTAAATCTAGTGCCGACCTATATGTACACATGCAAACATGCGGGAAGAATTCGAACACGATACCAGAAACTTCGGAAAACAGATATGAAAATAGTAATAAGGCCAGCACTTCCAAATTCGAGAAAGAGTCTGAACCGCATCCAATGGaaaatgttgtgtttgtttGGAACAATATAGGCCAAGACGCTAACAAATTCGATAGACCTCTAGACATCAATATCAATGACGACTCCACTCTTCCCGAACACAATAGAAGCTATGACGTTGAACAGGTCGATGATAACGAAGGCATGAACTTATCACCGAACAGTTTATCCCTTGGAAAGAACGTTTACAAATGTCCAGATTGTAAGTTTTGGGCGGCAACCGCCTCCAGATTTCACGTACACATCGTTGGGCATCTAAACAAGAAACCTTTCGAATGTTCACTTTGCAAATACAAATCTAACTGGCGATGGGACATAACTAAGCACATAAAGTTAAAGTCGGCTAGAGATCCGGAGCATTACGATGCTAAAGTGCTAATGACTGATGAAACGGGTAGAAGAAACTACAGCAAGTACAACAAGTTCTTAGCTGTGCcagttttaaatgaaaatggtGAGAACGAGTTTCACTACATTGATCCGAATACCACGATGGACTCTACTATGGAGGTGGACGAGACGTACAACGACTCAGGGGATATGACCATGTCTTCAGATATGCAACCGCTGAATTTGCAGACACAGCCCAGCGAACTCAAATACGATTTATTGGACAACGGAAACCCAGAAAGCAAAAAAGCAAAGAAAACCTTATGGAAATGTAAAAAATGCAActacaaAGATGCGTCCAAAGAGGCACTGTTGGAGCATGTAAAGCAGCACTCCAAAGGCGAGGGCAGTGCAGACGACCCCAGCAAGAAGGGCGAAAACGTGCCTGATCCCGCTGACCTAGCCTATCGCTGCGGTCATTGCAATCAGCTCTCCAACTGGAAACACGTTATACagAGGCACTGTCGCCTGAAGCATGAAGGTATTATAAAGGTGATCACGACTGTTAGGCCGAAGGTAGATCCTTCCCAAGCGGGCAACAACGAAGTATTTACCGACGCCTGCACGAAATGCCCCTTCAAAACCAACGATAAAAGGCAACTCGTTGACCACATGCAACAACATCAACCTTCAGCCCAGTCCATCTTCAAATGCTACTTCTGCCCATACTTCGTAAAGGACGAACAAGACTTGATCCAACATCTCCTTCTGCACGGCATAACGGACCCCGAAGATTATATTGCCAAAGCGATGGGTTGTAGATCCCCCCTTCCGGATCAACAAGCTATATTAGCCGAAGCAGCTCAACCAACCGCCGGTACCACAAAGAGGCACAAATGCACAGAGTGTCCGTATGAAACCAATAGCAAATCTCAATACATGTACCACGAACAGTTTCACAGACTGCCCGCAGATACACCTTATAAATGTCCCGAATGCAATTACAGTGTATCTAAAAGGCATTTGCTACATCAGCACCTTAGAGTTCACGGGATTCATACGAAGAAAAATGAATCCGAAGCTGAATTGGAAGCTTCCACGTCGTATCAAAACAGATCAGAAATTAAGTATGAAGAAGTTAAAGATATACCGTATGTTTGGGTTTCGGCAAGAAATGAGTTCCACAAAATGTACAAATGTCGATATTGTTCGTACGTTAACTCCCAGAAATGCAAGATTCCCAATCATGAAAAGATACACTGTCTAGCGTTCGAAAATAGCGAAGTGATAATTTATAAATGTCTAGAATGTAAATTTACATGTGATAATGCCGGAAGATTGGCTGAACATTCCAAGAGACATGGATTGTTGTATGGTCGAATTTACAGTAATGTTGAAGATGATATACCAGATGAAGACCAAATTGCAAAACTACGTCGAGTAATCGAATTAGATAAAGCTGCGACACCTGATGATACAACTAAAGAAGAAACAATCGAAGACGGCACTGAAACAAAAATGCTCTATTTTTGTCAAAAATGTCCGGCTAGATACTTCATTGAAAGTGAAATTAAAACGCACGAAAAGAATCATGATTTAAGTCATCCAAACAAATGTAAACATTGTGAATTTTCTGTTCCTGAAGAAAGTGATCTGGCTAATCATTTAACTGTGCATTCCGATGAATATCACATTAAAACTAATATGCTTAACTTCGTCCACAATTCGCATTCTCTGTACAGAGAGCCTAGATTAGAATCAATTCGTAATCCGGATACCTGTGAAGTTTTTTGGATAATATCAACTGCACCCGTTAAAATAATCGATCCCGTTGAACCACACATCAAGATAGAAACGAAACATTCGTCTAAGCAATATTGTTGCAAAGAATGTCCAGCGAAATTCTTTAAAAGTTCCGCATTGACATATCATGTGGGATTACACGGTGGAGAAGGCGACCATAAATGCAAAAAATGCAGTTATGCTGTTAAGAACGTCGGTAATTTAGCCAAACATGAACTACTGCATGAAAATGAgaataaacaacaaaacaatgaaTACGAATCTGGAGACGACGCGGACTATAAAAATATTCCATTGTCAGGAACAGACTTGTTCCAAAGAAAAACAGAAGCTCAGAAAAGAGTACTCACCGACAAAGATAAACTAGTTAAACCAAACGACCATTTTCCGCCAGTATTGCAAGCTGATCCACAGTTCGGTTACCTCATGCATGGTAATCCAGAATTTATTTATCCGACTTATCTAAAAAATGGTCGCCAAAAAGAAAAACGTTATAAATGCCATAAATGTCCATCAGCGTTTGAAAAGAGAGAACAATACAAAATACATCTATCGCTCCACGGTTCTAAACAGAGATACAAATGTGAACTTTGTGATTATTCAGTCAAATACTATGCAAACTACGTCCAACATATGAGAAAGCACCAAATGAACGATGAAGCTCAAGCCGAAAGGAAGAAAAACAACAATGATTTTACAGAACCTAATACTCAGGAAGTGGAAAAACATGACGATAGCGGCGATAATATAAAGTTAGCGATAAAAACGATGCCTAAAGGGACTCCTAAGAGTGATTTCCAACAATTCTCCATTAGAGATCAACAGACGCTTAGGTTATTGCAACGTAGGCGATCTATGGCTAATGGAACAAAGGAGGCGAACGCGTCTGAAACGATTTCACCGGTGAAAGAACGCAAGCAGCACATGTGTCTGCTATGTCCCTACACAAATCAACGACAGGACGCTCTCACTAACCATTACAGAAGGCACGATGCCCAAGATGTCGTCAACGGCGGAAGTCACAAATGCTCTTATTGTGATTTGGTTGTCGTCCAATCACATTTCCTGCGTGACCACATGAAAACTCATTTCAATTATCATAAAAATCTTACTCCTGAATGTTTTGTGGCGAACGAAGatgttagttttattattaagaaaTTAGATGAGGAGTGCGAACCGATTGATCTCAAGTTAGATATGAAGAGCAAAATTGTGCCGTGCAATGAcgaaaaattatttgtaaaacttAAAACAGGTGAACTTGTAGTTGAATAA
- Protein Sequence
- MPSSLSTLLIEDITNARPFPRRSLKDILSDTSSNAECFELSQREITQSYNCDKCKFRADNLRAYLWHVREVHFGLFKIYECPSCLYATTEQYELLRHMRMLHEETSLLPNRMDADIYDNNADNSERMEDLLEEIEECDDSPMEEESRDEQPEIDEAVNEPRTSSGAKAKGKFFSCDKCHYVTHIKARYTKHVKYHSMPMIKCTICEFRTPYKWNLDRHMKNHGGSGSFVCSKCSFTADIKQSLTVHEMNHHMPPIGHWVACRRRNRVGASDLAAAEPVLPKEEEGSGDSRSSHSASDAMGLHNHEKDIVSCNSDSNEAPSSQTNRDDLPSGQMSPNSGNEDRKNNKRAPRPIPQLIPLNASTPNQNKSGEPPAKKFKESSDASKFESLPDDISLIPVNAPKETAVRKKNNSFFDKLKERLLTETGKEGSLKCKNCGFESKCLSEHSVHEKNCTAQSNRVMLNTALPSMGSTRCQNCRHRCKSSADLYVHMQTCGKNSNTIPETSENRYENSNKASTSKFEKESEPHPMENVVFVWNNIGQDANKFDRPLDININDDSTLPEHNRSYDVEQVDDNEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHYDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYIDPNTTMDSTMEVDETYNDSGDMTMSSDMQPLNLQTQPSELKYDLLDNGNPESKKAKKTLWKCKKCNYKDASKEALLEHVKQHSKGEGSADDPSKKGENVPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHEGIIKVITTVRPKVDPSQAGNNEVFTDACTKCPFKTNDKRQLVDHMQQHQPSAQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCRSPLPDQQAILAEAAQPTAGTTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIHTKKNESEAELEASTSYQNRSEIKYEEVKDIPYVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLAFENSEVIIYKCLECKFTCDNAGRLAEHSKRHGLLYGRIYSNVEDDIPDEDQIAKLRRVIELDKAATPDDTTKEETIEDGTETKMLYFCQKCPARYFIESEIKTHEKNHDLSHPNKCKHCEFSVPEESDLANHLTVHSDEYHIKTNMLNFVHNSHSLYREPRLESIRNPDTCEVFWIISTAPVKIIDPVEPHIKIETKHSSKQYCCKECPAKFFKSSALTYHVGLHGGEGDHKCKKCSYAVKNVGNLAKHELLHENENKQQNNEYESGDDADYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKNNNDFTEPNTQEVEKHDDSGDNIKLAIKTMPKGTPKSDFQQFSIRDQQTLRLLQRRRSMANGTKEANASETISPVKERKQHMCLLCPYTNQRQDALTNHYRRHDAQDVVNGGSHKCSYCDLVVVQSHFLRDHMKTHFNYHKNLTPECFVANEDVSFIIKKLDEECEPIDLKLDMKSKIVPCNDEKLFVKLKTGELVVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00835150;
- 90% Identity
- iTF_00836087;
- 80% Identity
- -