Basic Information

Insect: Idaea dimidiata
Gene Symbol: -
Assembly: GCA_949358125.1
Location: OX442345.1:4303501-4314597[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.11 8.9 7.7 0.1 1 23 257 279 257 279 0.95

2 8 0.18 14 7.1 0.3 2 21 307 326 306 327 0.93

3 8 4.6e-06 0.00037 21.5 0.4 3 23 375 395 373 395 0.96

4 8 2.9e-05 0.0023 19.0 2.0 1 23 399 421 399 421 0.97

5 8 9.1 7.3e+02 1.7 3.5 1 14 426 439 426 449 0.80

6 8 4.1 3.3e+02 2.8 2.6 1 23 455 478 455 478 0.91

7 8 5.5e-05 0.0044 18.1 0.4 1 23 485 508 485 508 0.98

8 8 0.00014 0.012 16.8 2.3 1 23 514 536 514 536 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.11	8.9	7.7	0.1	1	23	257	279	257	279	0.95
2	8	0.18	14	7.1	0.3	2	21	307	326	306	327	0.93
3	8	4.6e-06	0.00037	21.5	0.4	3	23	375	395	373	395	0.96
4	8	2.9e-05	0.0023	19.0	2.0	1	23	399	421	399	421	0.97
5	8	9.1	7.3e+02	1.7	3.5	1	14	426	439	426	449	0.80
6	8	4.1	3.3e+02	2.8	2.6	1	23	455	478	455	478	0.91
7	8	5.5e-05	0.0044	18.1	0.4	1	23	485	508	485	508	0.98
8	8	0.00014	0.012	16.8	2.3	1	23	514	536	514	536	0.97

Sequence Information

Coding Sequence: ATGGAGCAGATAGTAGTGGTCGAGGCGTATCCCGAGATAGGAACGTGTAACTTGTGTCTAAATGAAGGAGCAGTAAAAAATATGCTCACCTCCCATTTCTACAATGATTCTAATGAAATATACAGTAAAATGCTAATGAAATGCTTTGCCATTGATATAATAACTCCTGAACTTGGTGATACCAAACGGCTGATTTGTGAAGGATGTATCATGAAGCTAAGAGATTGTTCCAAATTCAGGGAGGTTGTGGAAGCATCATTGCAGACTTTACAGAATAACATTAAACTTAACAAAGAACTCCAAACAACAGCAATAGTCAAAGAAGTTAATATTACACTCAGAGATGATTGCAAGCCGGCTAGGAAGAAGATGATGGGGAAACTTAATCTGGCGACCGCAGAGCACCATAGTACAGCCAGTGATAACTCTGTGTCTGAGGATAGCAGCCACCATGACTCCTGTTCGTCTGATGAAAATGATTGCAAGTCAGCCATTAGGAGAATGAAGGATGAAGATTCTGACTTCAGACTGTCTGACTCGAACAACGGTTCTGATACTGAAGATCATGGCGCGTCCTCAGACAATAATTCTGAACATGAGAGCgcagAAGACAAAATCCCCCTAATAATCGggagaaagaagaagaaaaaaacgaaACCGAAAAAGAAACTCAATCAAAAAGCGATACAATGCCATCAAGATTTGCAGGACAtcgaaacaatgctcaccgctGGACTTTTTCCATTcaaaatgtatcaaaataaCAAGTACTCGTGCTTCATTTGTCCGGAGATCTCCAAAAACCTCGAAGACATAAAGAACCATGCCCTCGAACACAACAAATCCATCCTCCTTTCAGCATTCAACCAAATGACCTACAACACTTCTTACAAATACTACAAAGTTGACAAGAAACTCAAGTGCAAAGTATGCAAAACGGACATCAACAACTTCACCGAACTGAAAACCCATATAGAATCGAACAAGTGCAGCAAAAACTTAGACATTTTAGATCCCACAGAACCGAAGCAAAGGCCTAAGCGAATAAGGTACAAACCGAACGAACCGGTCCAGACTAAATGGAATTCTTTACCTTTCAAACTGGAAAAGGATCAACTAGACTGCCCGGTGTGtaagaaagtgttttttaatCGAGTGACTTTGACAAATCATATGAACGTTCATTACCCGAACCACATATGCGATTCTTGTGGGAAAGCGTTCGCGTCGATGTCCCGTTTCAGGTCACATATGCGTACGCATGAATTAGGGACATTTCCTTGTCGATACTGCAAACTGGTGTTCGATAAGAAGACCAAACGAGAATGCCACGTTACAAAGGAACATCGGACAGGCATCCGGTATAACTGCAAACTGTGTAATATACATCTGCCAACATTCCACATGAAGCAAAAGCATCTGGCCGAAGTTCATAATGAAGAGTTGAAGAAATACAAATGCAACGCTTGCACCAAGTCTTACATAACCCCTGGCTCGCTCTCGAGTCATGTTCGAAGAGAACACTTGAAAGAACGGAGTCATGAATGTAACCAATGTGATTTAGCATTTTATTATAAGAGAGATCTGATGAAGCATTTAGAAAAACACAGTCAGCATCGTAACTTTTAA
Protein Sequence: MEQIVVVEAYPEIGTCNLCLNEGAVKNMLTSHFYNDSNEIYSKMLMKCFAIDIITPELGDTKRLICEGCIMKLRDCSKFREVVEASLQTLQNNIKLNKELQTTAIVKEVNITLRDDCKPARKKMMGKLNLATAEHHSTASDNSVSEDSSHHDSCSSDENDCKSAIRRMKDEDSDFRLSDSNNGSDTEDHGASSDNNSEHESAEDKIPLIIGRKKKKKTKPKKKLNQKAIQCHQDLQDIETMLTAGLFPFKMYQNNKYSCFICPEISKNLEDIKNHALEHNKSILLSAFNQMTYNTSYKYYKVDKKLKCKVCKTDINNFTELKTHIESNKCSKNLDILDPTEPKQRPKRIRYKPNEPVQTKWNSLPFKLEKDQLDCPVCKKVFFNRVTLTNHMNVHYPNHICDSCGKAFASMSRFRSHMRTHELGTFPCRYCKLVFDKKTKRECHVTKEHRTGIRYNCKLCNIHLPTFHMKQKHLAEVHNEELKKYKCNACTKSYITPGSLSSHVRREHLKERSHECNQCDLAFYYKRDLMKHLEKHSQHRNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00836064;
90% Identity: iTF_00836064;
80% Identity: -