Basic Information

Insect: Idaea dimidiata
Gene Symbol: B0310.2
Assembly: GCA_949358125.1
Location: OX442332.1:6045785-6060536[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.1 1.7e+02 3.7 0.5 1 23 303 325 303 325 0.80

2 11 0.0056 0.45 11.8 0.9 1 23 332 355 332 355 0.93

3 11 0.32 26 6.2 0.4 1 23 359 381 359 381 0.92

4 11 0.012 0.98 10.7 0.8 1 23 386 409 386 409 0.97

5 11 0.0011 0.086 14.0 0.4 1 23 413 436 413 436 0.96

6 11 3.9 3.1e+02 2.8 0.1 2 21 449 468 449 469 0.86

7 11 0.16 13 7.2 0.2 2 23 524 546 523 546 0.96

8 11 0.0097 0.78 11.0 0.5 2 20 562 580 561 583 0.92

9 11 0.00013 0.01 16.9 2.1 1 23 589 611 589 611 0.97

10 11 0.00024 0.02 16.1 2.8 1 23 618 640 618 640 0.98

11 11 9.6e-05 0.0078 17.3 3.1 1 23 646 669 646 669 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.1	1.7e+02	3.7	0.5	1	23	303	325	303	325	0.80
2	11	0.0056	0.45	11.8	0.9	1	23	332	355	332	355	0.93
3	11	0.32	26	6.2	0.4	1	23	359	381	359	381	0.92
4	11	0.012	0.98	10.7	0.8	1	23	386	409	386	409	0.97
5	11	0.0011	0.086	14.0	0.4	1	23	413	436	413	436	0.96
6	11	3.9	3.1e+02	2.8	0.1	2	21	449	468	449	469	0.86
7	11	0.16	13	7.2	0.2	2	23	524	546	523	546	0.96
8	11	0.0097	0.78	11.0	0.5	2	20	562	580	561	583	0.92
9	11	0.00013	0.01	16.9	2.1	1	23	589	611	589	611	0.97
10	11	0.00024	0.02	16.1	2.8	1	23	618	640	618	640	0.98
11	11	9.6e-05	0.0078	17.3	3.1	1	23	646	669	646	669	0.93

Sequence Information

Coding Sequence: ATGAAGCAGCTGCTTTCAAAAATCTGTCTGTCGGTTGATAGGAAAATGTTTGATTTAGAACAATTCAGTTTACAAGACAGCTACAAACATCTTACCGGATTACTTatGGACCCCGGGTTGCCTCGCGTCGTGTGCTTCGAATGCGGTCATCGTCTCCGAGCAGTGAATGTGTTCAGAAACAAAGCGCTTAAGGCGCATAACTTACTCACAGACATCTATATTACTTGTACAACGAAATATTTAACACTACGTCAAGTAAAATCAATTGATCGTTCAGCGAATAAATTGAAATCTTCACTAATACAgacaatatacaaacaaactgacTACGATTATCAAATAAAAGACAGTTTAATCGTTAAATCCGAATTAAACAATGTTAATAATTCATATAACGATAAAGATAATCAAATCAATAATGATGAGAAACAATTAAATGACAATAAtgataatgaaaataatgatagtgaaaataatgtaattgataatataaataatggaTTAAACGAAACAGACAATGAGGATCATAATGATAAAGATAATTTACCAATAATAGAAGTTGAAATAAAGGATGAGACAAACgaaatatattttgacgaaTACGAAAACGGATTCGAAAGTGATGATGATAGAAAATTGAGTGAAATATATGTAGAGAAACCGAAACCTAGATTGAAAATGAAGAAGAAGATCGAGAAGAAAGTGAAGGTGAAACAGAAAAGGAAAGATGATAGTGAAAATGATCCTTCAACCACTATGAATAAaTATAAAAACACATATATAAAACGTAGAAGAACAACGGAAGGGCCCGACGAAGCGCTATTCACCATATCGTCGCTGACATACGACGAACAAATAGCCGAAGTCGAACAGCGGCAAGAGAGCAATTCGTACAAGAACTCTCCGTATAGATGCAACGTGTGCTATCGGGGGTTCTTGTTGAAGGATCGATACGACGCGCACATCGTCCGACATAGCGAGCAATACGGTGCGTTTGAATGCTTCATCTGCAAGACTCGGTCGAAAAGTGCGCGTGCGCTTCGCAAGCATCTCACCGCGCAGCACACGGAGAAGTTCAGCTGTAAGGGGTGCCCCTTCACTACCCGGAACCGCGGCGTGGCAAGGGAACATGAGAAGTGGCATGCTGGGGCTAAATACCAATGTCCGCACTGTCCTAGCGAATTTGATAAGATAACAACATACATGGGTCATATACGTATAAAGCACGTGTCGGACTTTGTTTGCCCGTTGTGTGGGTACACGTTCGTCAGTCAGAAAGGTATCGATGTCCACAAGAAGAAGAAACACCGCCTCGAGGACGACACGATACCTGAGGACGGTCCGTACTGCACGGTGTGCGAGGTGCGGTTCATCACGGAGGAGGCTCACGCGCGGCACTTGAAGCTCTCCTCGCGGCACATGAGCGAGGATGATCCCAACCGTATCCGCAACGACTCGCAAAGCATGAACACGGGAGTGGGGTCCGCGCGTGCCGTGCGCCGCATCGAGCGGCGACCTGTCGTGCACAGCGCGCGCGGGGAACGAGACGCGCCGCCATCCGGACCCGTCACCTGCGAACAGTGCGGAGTCCAGCTCCGCGACCTGCGGCTGTACGCGCAGCACTTCCGCCGCGCTCACCCCGACAAGAACCGCACCAAGTACCCCGCCATGAAGACGCCGTGCATGTGCGAGCAGTGCGGACGGATCTTTCAGAGTATGGCTTTATTAAAAGACCACATGTGGGTCCACACCGGCGAGAAACGGTTCAAGTGTTCGCGTTGCCCGAAGAGCTTCACTCAGAAGACGAACCTGGTGTTCCACGAGAGAGTTCATAGTGCGAGCAGACCGACCTACGAGTGTCCACTGTGTGGGAAACATTTCGCCTTCTTCAACAATAGGAGACGGCATATGTTCATCCACACCGGGCTGAAACCTTTCAAATGCGACACGTGCGGCAAATGTTTCACGACACAAGGCGAGCAGAGAGCTCACGTCGAACACGTGCATATGAAGAAACCGTGGCCAAAGCGGAGTCGGAGGCGGGACGATGGATGGCAGGACAAGTGTGAAGACTGA
Protein Sequence: MKQLLSKICLSVDRKMFDLEQFSLQDSYKHLTGLLMDPGLPRVVCFECGHRLRAVNVFRNKALKAHNLLTDIYITCTTKYLTLRQVKSIDRSANKLKSSLIQTIYKQTDYDYQIKDSLIVKSELNNVNNSYNDKDNQINNDEKQLNDNNDNENNDSENNVIDNINNGLNETDNEDHNDKDNLPIIEVEIKDETNEIYFDEYENGFESDDDRKLSEIYVEKPKPRLKMKKKIEKKVKVKQKRKDDSENDPSTTMNKYKNTYIKRRRTTEGPDEALFTISSLTYDEQIAEVEQRQESNSYKNSPYRCNVCYRGFLLKDRYDAHIVRHSEQYGAFECFICKTRSKSARALRKHLTAQHTEKFSCKGCPFTTRNRGVAREHEKWHAGAKYQCPHCPSEFDKITTYMGHIRIKHVSDFVCPLCGYTFVSQKGIDVHKKKKHRLEDDTIPEDGPYCTVCEVRFITEEAHARHLKLSSRHMSEDDPNRIRNDSQSMNTGVGSARAVRRIERRPVVHSARGERDAPPSGPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCSRCPKSFTQKTNLVFHERVHSASRPTYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCDTCGKCFTTQGEQRAHVEHVHMKKPWPKRSRRRDDGWQDKCED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00836013; iTF_00837646; iTF_00837927; iTF_00834718; iTF_00835032;
90% Identity: iTF_00836013;
80% Identity: -