Idim011191.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- -
- Assembly
- GCA_949358125.1
- Location
- OX442332.1:4788460-4812792[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.092 7.5 8.0 0.1 2 23 381 402 380 402 0.96 2 13 0.0085 0.69 11.2 0.0 1 23 413 436 413 436 0.96 3 13 0.056 4.5 8.6 3.9 2 23 610 631 609 631 0.95 4 13 0.0021 0.17 13.1 1.3 1 23 643 666 643 666 0.91 5 13 0.00011 0.0091 17.1 0.8 2 23 673 696 672 696 0.96 6 13 1 81 4.7 0.3 3 23 704 724 702 724 0.92 7 13 0.0099 0.8 11.0 1.8 1 23 730 752 730 752 0.98 8 13 1.9 1.5e+02 3.8 0.1 2 19 763 780 763 783 0.86 9 13 0.19 15 7.0 0.2 1 23 862 884 862 884 0.96 10 13 2.9 2.4e+02 3.2 7.0 1 23 891 913 891 913 0.95 11 13 0.0016 0.13 13.5 1.8 1 23 941 964 941 964 0.95 12 13 0.0012 0.1 13.8 2.2 1 23 971 994 971 994 0.97 13 13 0.012 1 10.7 0.2 2 23 1012 1034 1011 1034 0.96
Sequence Information
- Coding Sequence
- ATGAAATTAGATCTAAATGAAACGGACACTGTTCAATTTCAAGAAGCAATAGACTCTAATGGCGACCAGCTTTATGTACTAGACGACGGGACGCAGATTCGAGCCTCGCAAATACATTTCGATAATGAAGACGAACTTTTAGATTTAACACTTGAAACACTACCATTTGAACAAATAAACGAAATTGATAATGAAGTTAACGCTACGGATTTTGAAGatgttaattataaaattgttgcTAGCCCTGTTCTGAGTACAAACTCCAGTCCAAAACACGGGTTTATGACTACAGTACCTTTTAAACTTATTTGTAATAATACTATAGGATTTGAGGCCCAATTTACCAAGTATTTAGAGCAAAGTACCAAAACTTACACAACTTTGAACAATGCGgcgaagaaaaataaatcaccAAGGAGTCTGATCAAAGATAATTTCAAAGATAAAGAATTTAGATATACAAGAGATgaaatacttaatatattaaaagatTCGCCAGTTACTAGTATACCTTATGAAGTGAGTGATAGAAAACATGTTAGGAAAGTGGATCCTACGCGAATGGTTCAAAAAAGTTCAGTGAAGACAGTTGACATCGAAGGACTTGTTATTGCAGACGGAGGTAGCAGGATCTGCTTTATCTGCGGTCTAAATGTCATAGACAAAGTTTATATTTTCGATAAAGAGGACCAGAAAATACATAGACGATCACCGCAGAAGAATTCCGCCCAGTTGAAAGTTATTTGTCAAAAATGTTTGAACGAAAACTTTAAACCTTCCCGAATGAAGGGTGctaatcaatttttaaactgTGACGAATATTTAGTCATTAGAAACAATCAACAATACATATTTCAAAAGGTTAAACACTTTAAATTTCGTACTGAAGAGAAAGAAAAaccgaaaattaaaaaagaagagTTTGTTAAAGTAGAAATTGGATCAGATGGTGAGATAGTAACAAAACCAATAGATAATTTTGACGTTATTATTGTTGACAAAGCTAAAGATAGTTCTAGCGATGTTGAGCTTGTAGAACCAGAACTAGATAAGATTATTGATAATTTGGAGGAAGCTGATGAAGACGTGAAAGAATTTCTGGGGAAATATGAGGGTGATGCTGTTAAGCCTAAAGTCTTAAAATGCAGGTTTTGCGAGCTCGTGTTTTCTAGTACAGCAGATGTAATAGCTCACGGGAAGATTCATAAACATGAACTAGAGGATTCAGATGTCGTTTACCCTTGCCCACTTTGTGACTATGGGTATCCAACTTTCAATTGGTTGAGAGGTCACATAAAGGCAGCACACGATTATGTGAAACTTAAACAAAATGACATTGAACAACAATCAGGGAAGATTCAAATAACATCTGAAATAGAAGACATAAAATCACTATCGTTGATTGATATGGAAAAAGAAGATGAATCATTGAAGAATGACGGCCCGAAAATTGAGTCAACGGAAATGGTGATTAAAACGGAAGTCAAGACAGAATGTTTGAGTTCTGATGAAGAAATATGGATAGTTCAAGCCGCAGATGATGCAGCAAAAGAGAAGAGTGGAGATAACCTGCAAGCCGATGAcgttaaaacagaagaaataaaaCACGAAAGTTACGTCTTCAGTCAACTATTCAGTAGCAAAGACTCTGTATCTTCACATAAATGTAAGAAAGATAAAAAGCGGAAGCGCGAGGATGATGAAGATGTCATTCGTATACCTACTCAAGAAGATTTTATAAGGAGAGCTGAAGGAAGACCCCGCGTCTTCACTTCTGATATTCAGAAACGTAAGAAGACTAAAGAGTTTCCCATTGCTCAGATAGTGACTTGCCATAACTGTGACAAATCTTTCATGTCTAAAGTTAGACTCAAGTTTCATATGCAATTCCACTCTTCGACCCCGATGTTGCCAGTGGAAGGTCACTACACGTGCACCGTCTGCGGCCGAGTGTTCGGCCACGAGGCGGCTCTGTTCGACCACGTCCACTTCCAACACGAGAAGCGGAAACGGTGGCAGTGTCCTGTCAGGACTTGTGGCAAGACCTTCCGGCTCAGAGCGACGCTAACGAAGCACAGTCGCAGTCACACGGACACGCGGCGCTACGGGTGTGTCACCTGCGGGAAGCGGTTCCTGGACAAGCAGACGCTGGACGAACACTCCGTCACACATCTACAGATAAAGCCGTACCAGTGCCACATCTGCCTGAAGCAGCTGACCCGCGTCTCCCGGCTGCGAATGCACGTGCGGGCACATCAGCAGGAGCTCGCACCGTCCCGCGTGCCCGTCTGTATGCACTGCCAACGGGCGTTCGCTAACGTCGCACAGGCACAGGAACACGCATCAAAGTCGAAGGAATGTATGGAGTCAATTGCAACAGAAACTAAGGAGGAACCACTGGAGGACCCCGCGGTACAGCTGTCGCCCACTAGTGGGATAGTCAGACACACTATACAGGTCATTGAGTCCCCCCGCCTTGCCCGAGCGCGATACGAAGTCCCGAGCCCGGTGAGTCGGCCTCTACTGCAGCACCTACCGCCGGCCGCTCGCACGCTCATACGGATCGTCGAGATCGAGAAGGCTTTCCGCTGCGAGTACTGTGAGGAtgtaTTCTACATAGAAGAGGGGTTGAACAAACATCGCGTGATCCACAAAGGTGTCAAGAATCCGTTCACATGTCATATATGTAAAGTTTCATTTGCTTCTTACTCTAGATGTACGACGCACAAGACGACGCACGGGTTCTACAAGCGTACCGCGGGCGGGGGGGGGCAGCCCGCCACCGTGCTGGGCTACGGAGACTTCCCCACCGTCAAACATTTCCTGTGCGAGGATTGCGGCCGTTCGTACCTCCATTGGACGTACCTACAGGTACATAGAAGAATGAAGCATCCCAACGAAAACTTCTTACATAAATGTAACCAATGTGAAATGACTTTCCCTAACAGtTGGAGTTTGGCATATCATAGGAAGAAATTGCATTCGAAACCTCTAGAACAGAATGAAGGCAAAACTGTGCAGAACTATAGAATTCCCTGCAGAGATTGCGATGAGATATTGCCAAACAAAACAGCGCTCTATAAACATAGGAAGAAGGAACACAGTGGCGTGTCCGTACAGAACATTAATTCTGCTTTTGATAGTAACCAAGCAAGaaatgcaTCTGGAAGAACACTTTTGCAACGGCCAAGAACACATACAGCAGTTATTGAGGTGCAAGGTGCAACTCCTTCAGCGGAAGAAATAGTGAATATATTAACCAAAAACAATATATCACAGAACAGAGTCCTTGAAATTAATACCATTACATTTGCCAAAGGCACATCGAGCATAGTACCAAACTCGATGCGCGCGCTGCTGATGCTGCAGGCCGTgccgcgcggcgcgggcgcggggagCCGCACACTCCGCGCCGCGCCCGCACCCGCCAGCCACGGGGCTGCACCCGCACCTACCAGCTACGGGGCCGCACCTGCACCCACCAGTTACGGGGCCGCACCTGCAGGCCACAAAGACGCACCCGCCAGCTACGGGGCCGCACCCCCACCCTTCAGCTACGGGGCCACACCCGCCAGCTACGGGGCTGCGCCCGCACCAACCAGCTACGGAGCTGCGCCCGCACCCACCAGCTACGGGACCGCACCCGATAGCCACGGGGCCGCACCCCCACCCGCAAACTACGGGGCTGCACCCGCCAGCTACTGGGCAGCACCAGACAGCCACGGGGCCGCACCCCCACCCGTAAGTTACGGGGTCGCATCCGACAGCCTCGGGGCCGCACCCGCCAGTCATGGGGCCGCACCCCCACCCGCAAACTACGGGGCTGCACCCGCCAGCTACTGGGCAGCACCAGACAGCCACGGGGCCGCACCCCCACCCGTAAGTTACGGGGCCGCATCCGACAGCCTCGGGGCCGCACCCGCCAGCCATGGGGCCGCACCCCCACCCGCCAGCCACGGGGCCGCACCCCCACCCGCCAGCCACGGGGCCGCACCCCCACCCGCCAGCTACGGGGCCTCAACCGGGGTCGCCATAAGAGACGATACGCAGgcAAGACCAGAATTAAACGCGCAGTTGTTGCAAATGGATGAAAAACGTATTCTATGGGAACCAAACAGTGCAGTCTCAGACTTGTCATGA
- Protein Sequence
- MKLDLNETDTVQFQEAIDSNGDQLYVLDDGTQIRASQIHFDNEDELLDLTLETLPFEQINEIDNEVNATDFEDVNYKIVASPVLSTNSSPKHGFMTTVPFKLICNNTIGFEAQFTKYLEQSTKTYTTLNNAAKKNKSPRSLIKDNFKDKEFRYTRDEILNILKDSPVTSIPYEVSDRKHVRKVDPTRMVQKSSVKTVDIEGLVIADGGSRICFICGLNVIDKVYIFDKEDQKIHRRSPQKNSAQLKVICQKCLNENFKPSRMKGANQFLNCDEYLVIRNNQQYIFQKVKHFKFRTEEKEKPKIKKEEFVKVEIGSDGEIVTKPIDNFDVIIVDKAKDSSSDVELVEPELDKIIDNLEEADEDVKEFLGKYEGDAVKPKVLKCRFCELVFSSTADVIAHGKIHKHELEDSDVVYPCPLCDYGYPTFNWLRGHIKAAHDYVKLKQNDIEQQSGKIQITSEIEDIKSLSLIDMEKEDESLKNDGPKIESTEMVIKTEVKTECLSSDEEIWIVQAADDAAKEKSGDNLQADDVKTEEIKHESYVFSQLFSSKDSVSSHKCKKDKKRKREDDEDVIRIPTQEDFIRRAEGRPRVFTSDIQKRKKTKEFPIAQIVTCHNCDKSFMSKVRLKFHMQFHSSTPMLPVEGHYTCTVCGRVFGHEAALFDHVHFQHEKRKRWQCPVRTCGKTFRLRATLTKHSRSHTDTRRYGCVTCGKRFLDKQTLDEHSVTHLQIKPYQCHICLKQLTRVSRLRMHVRAHQQELAPSRVPVCMHCQRAFANVAQAQEHASKSKECMESIATETKEEPLEDPAVQLSPTSGIVRHTIQVIESPRLARARYEVPSPVSRPLLQHLPPAARTLIRIVEIEKAFRCEYCEDVFYIEEGLNKHRVIHKGVKNPFTCHICKVSFASYSRCTTHKTTHGFYKRTAGGGGQPATVLGYGDFPTVKHFLCEDCGRSYLHWTYLQVHRRMKHPNENFLHKCNQCEMTFPNSWSLAYHRKKLHSKPLEQNEGKTVQNYRIPCRDCDEILPNKTALYKHRKKEHSGVSVQNINSAFDSNQARNASGRTLLQRPRTHTAVIEVQGATPSAEEIVNILTKNNISQNRVLEINTITFAKGTSSIVPNSMRALLMLQAVPRGAGAGSRTLRAAPAPASHGAAPAPTSYGAAPAPTSYGAAPAGHKDAPASYGAAPPPFSYGATPASYGAAPAPTSYGAAPAPTSYGTAPDSHGAAPPPANYGAAPASYWAAPDSHGAAPPPVSYGVASDSLGAAPASHGAAPPPANYGAAPASYWAAPDSHGAAPPPVSYGAASDSLGAAPASHGAAPPPASHGAAPPPASHGAAPPPASYGASTGVAIRDDTQARPELNAQLLQMDEKRILWEPNSAVSDLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -