Basic Information

Insect: Idaea dimidiata
Gene Symbol: -
Assembly: GCA_949358125.1
Location: OX442336.1:8520579-8528305[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.055 4.5 8.6 2.6 1 21 194 214 194 217 0.90

2 10 0.14 12 7.4 4.2 1 19 269 287 269 292 0.95

3 10 0.0001 0.0085 17.2 1.8 1 23 326 348 326 348 0.98

4 10 5.7e-05 0.0046 18.1 4.1 1 23 356 378 356 378 0.98

5 10 0.00015 0.012 16.7 0.3 1 23 387 410 387 410 0.97

6 10 0.00033 0.026 15.7 0.2 1 23 416 438 416 438 0.97

7 10 2e-06 0.00016 22.6 5.2 1 23 444 466 444 466 0.98

8 10 0.0023 0.18 13.0 1.0 1 23 471 493 471 493 0.98

9 10 3.4e-06 0.00028 21.9 4.2 1 23 499 521 499 521 0.97

10 10 0.0017 0.14 13.4 0.3 2 23 528 550 527 550 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.055	4.5	8.6	2.6	1	21	194	214	194	217	0.90
2	10	0.14	12	7.4	4.2	1	19	269	287	269	292	0.95
3	10	0.0001	0.0085	17.2	1.8	1	23	326	348	326	348	0.98
4	10	5.7e-05	0.0046	18.1	4.1	1	23	356	378	356	378	0.98
5	10	0.00015	0.012	16.7	0.3	1	23	387	410	387	410	0.97
6	10	0.00033	0.026	15.7	0.2	1	23	416	438	416	438	0.97
7	10	2e-06	0.00016	22.6	5.2	1	23	444	466	444	466	0.98
8	10	0.0023	0.18	13.0	1.0	1	23	471	493	471	493	0.98
9	10	3.4e-06	0.00028	21.9	4.2	1	23	499	521	499	521	0.97
10	10	0.0017	0.14	13.4	0.3	2	23	528	550	527	550	0.95

Sequence Information

Coding Sequence: ATGGCTAACTATATGGACTTATGCAGATTGTGTACCAAGCAAGAtgaattttctaaaaacttacttgataaaagaaacaaaaatatattgaaactAGTACACGAATATACACAGATTACGGTGTTTAAACATGATCCTTTACCCAAAAAGCTGTGTTTATCTTGTGAAGAAAAGATGTTAAGTTTTCAGTTGTTTTTATTGAACTGCCAAAAAGCCCAGGAAACCTTAGAGAAGCTAATTTCAGAGTCTTCTGAAGACATAATTGTTAAAAATGAGACTGAAACATCAGCTCATGACTGTACGAATTCAGATACCAAACCGGAGGTCAAAGTGGAAATGACTGCTGAGGACATAGTCAGTGTTTTAAATGATGACAAAGGAATTGGTTTTAATTTACTATTTGATGACAATGGATTTGATAATGATGATCAGGGAGAAATGTCTGATGATATTTCGATTGCTGCTCTGAAGGAAATCAAGAAGAAACACATAACAGAAAAAACAGAAAGTTTAAAGGATTTGGGTGCATTAAATCAGATTCTAACTTTAGGTAACTTCAAAGTAAAAGATATAATAAAgTTCGAATGTGTACTATGTGATGAAAACTGTAAAAGTTGGACAAGTCTGAGTTCCCATTATGTTGCTTGTCATCAAAGTGAACCGGTGGTAATATGTCTATGTggatttgaaattaaatctaaaactgtTCTTTACAAACATTTCACGGAACACAAGGAAGAAAGTAGAAAACTTAGGAATGAAGAAACTAAACCAGACGATCATAATGTCAAAGATTATATTTCGTTTACATGCAGTCAATGTACGGTAGAGTGTTCGAGCTGGTACAGTCTCAAAGCTCACTGTGAGGAGTATCATGTAGATGTAGTTCCCGTTGTAATGTGTAAATGTGGCATAATCCTCAAATCCAAGTCGGTCATGTACAAACATGTTAGTGATCATTTGAATCCTATGGATTTCTCCTGTGATAAGTGccgaaaaactttaaaaacgcAGGCGGCATTAGAAAAGCATAAAATGAGGCATATACCAAAGGCAGAAAGACGGTTCCAGTGTTCGTCTTGTGAAAAAGTATTCAATAATAAAGATTGTCTCAAGTCACATGAGAGGTCACATATACCTTTAGAAGAAAGGAAAAAATACGAATGTGAAATATGTGATTTGAAGTTCACAACGCGGTCGTCGGCGGCGTCGCACAAGAAGGTGGTGCACCTGAAGCTGAAGGGGTTCGTGTGCGACCTGTGCGGGTACGCGTGCGGCACCAGCGGCGAGCTGCGGCAACACCGCGCCATACACAGCGATGACAAGCCCTTCCACTGCAACAAGTGTCCTAAGAATTTCAAGACGTATTCGAACCTGAAGACCCACATGGACACGCACGAGGACACGGCGTACGAGTGCTACGTGTGTCGCCGCATCCTCAACAGTCGCCGCACGCTCCGCAAACACCTGCTGGTGCACGAGGACAAGTGCCGCCACGTCTGCTCCTACTGCAACAAGGCTTTCAAACGACGACAGACTTTAAAGGTGCACATGTACACGCACACGGGCGACAAGCCGCTGTCGTGCAAGTGGTGCGCCGAGCGGTTCGCGTACGCGTCCACGCTGCGCTCGCACCGTCTGCGTGCGCACCCCGACAAGCTcgcggcgcaggcgcaggcgcaGTCACACTACACGCACGCACACTCCCACGCCCCGTACCCGGACCCGGGCCATGTGCAGCACCGGGCCTTGGACGAGAACTACATCAAAAACGTCGTCACTGCGGCCGTAGCGGTGTCCGTCGCTAAAAACGAAAACGAAGTTATTTAG
Protein Sequence: MANYMDLCRLCTKQDEFSKNLLDKRNKNILKLVHEYTQITVFKHDPLPKKLCLSCEEKMLSFQLFLLNCQKAQETLEKLISESSEDIIVKNETETSAHDCTNSDTKPEVKVEMTAEDIVSVLNDDKGIGFNLLFDDNGFDNDDQGEMSDDISIAALKEIKKKHITEKTESLKDLGALNQILTLGNFKVKDIIKFECVLCDENCKSWTSLSSHYVACHQSEPVVICLCGFEIKSKTVLYKHFTEHKEESRKLRNEETKPDDHNVKDYISFTCSQCTVECSSWYSLKAHCEEYHVDVVPVVMCKCGIILKSKSVMYKHVSDHLNPMDFSCDKCRKTLKTQAALEKHKMRHIPKAERRFQCSSCEKVFNNKDCLKSHERSHIPLEERKKYECEICDLKFTTRSSAASHKKVVHLKLKGFVCDLCGYACGTSGELRQHRAIHSDDKPFHCNKCPKNFKTYSNLKTHMDTHEDTAYECYVCRRILNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGDKPLSCKWCAERFAYASTLRSHRLRAHPDKLAAQAQAQSHYTHAHSHAPYPDPGHVQHRALDENYIKNVVTAAVAVSVAKNENEVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00835889;
90% Identity: iTF_00835889;
80% Identity: -