Idim011376.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- ZNF131
- Assembly
- GCA_949358125.1
- Location
- OX442332.1:7194318-7202907[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4.2e-05 0.0034 18.5 0.8 1 23 233 255 233 255 0.98 2 13 6.9e-05 0.0056 17.8 5.2 1 23 261 284 261 284 0.97 3 13 0.032 2.6 9.4 1.4 2 23 291 312 290 312 0.96 4 13 0.056 4.6 8.6 0.8 1 23 319 342 319 342 0.96 5 13 0.00021 0.017 16.3 0.6 1 23 352 375 352 375 0.96 6 13 7.1e-06 0.00058 20.9 1.7 1 23 412 434 412 434 0.99 7 13 2.5e-05 0.002 19.2 0.4 1 23 440 463 440 463 0.95 8 13 0.11 8.6 7.7 4.3 1 23 500 523 500 523 0.96 9 13 0.00061 0.05 14.8 3.1 1 23 529 551 529 551 0.96 10 13 0.00054 0.044 15.0 5.3 1 23 561 583 561 583 0.96 11 13 1.3e-05 0.0011 20.0 0.6 2 23 590 612 590 612 0.96 12 13 9.6 7.8e+02 1.6 4.8 1 23 629 652 629 652 0.96 13 13 0.00079 0.064 14.5 5.0 1 23 658 680 658 680 0.97
Sequence Information
- Coding Sequence
- ATGCCTCAGATAACTGCGTGTAGAGCGTGTCTAGCGGAAAATCTTAATATGTATCGCGTTACAAACTCTCCATATAAAGAGATATATGAGAAACTAACAAATGCTAAGCTAGGAATGGTCTACCCGGACACATTCTGCTATATTTGTGTGTCCATACTACATAAGTTTCGGAAGTTTTCTACCCTTGCTAGAAATTCTAATGCCAAGCTGCAAGAATGGTACAGCAGTGAGACAGAAGTTAGTATTGCTACTTTTCTACATTGTACTTTAGTTGATACTCTTATGcGTAAGCCGGCCACACAACCACTGTTCATAATATCAACCACAGCAGTTGAATATGTATCGACACTGGATGAAAACAGAATACAAgaaaagaaagataaaataCAGATCAAAATGGAGAAGATTGACAACACTATtggtgaaaaacaaacaattcaGTTTATTGAATCGACTGGAGAATTATACAGATACGAGAGCACAACACGAGATGACTCCATGGACATTGACACTGCCTGGTCTGATGATGAACCGGAACCGAAACCCATTGTAAAGCTAGAGTCAAGGAAACTGGTCAAAACTGAGAAGACACCGAAAgGAGTTCCTGtgaataagaaatttaaaaggGAAACCCTTCTTGATGACCATATAAATGCCATTACGAAACCACAAGAAAATCAACCACATACAAAGCAATATTCATGTGATATTTGTCTAAAAGCCTATAACACTAAAACTAGCCTACAGAGACACGAGATGAGTCATAACAAAGATAAGCAATTCAACTGTGATCATTGTGATAAAAGATTTAACGAGAAAGCAGCTCTCAAACGGCATCATTTGACGAAACATTACGACAAACCACCCTTAGTCTGCCAACATTGTTTCATCGGTGCTGTCAATAAAGACGACCTACATTCTCACATGAATAACCACACTCTTAAATGGAAAGAGTACATATGTGATTATTGCAATTATAAGAACGCTGACAAGAAAAAATTAGAATTACACATTATGAATAAACATCTCCGCGCCAAACGGAGAGAAAAGATATATCCTTGTGACCTGTGTGATTACAAAACTTATAAGAAATCGTGGCTGAGAAGACATATTGACCGTATACATTTGAGACAAAAGAATTATTTTAGTGAAGTGTGTGGCTATAGAGCTTTTACAGAAAGCAGTATACTTAAACATTCCATTATAGATAATGAGGATAAAACCGATCAGGAATTTAAATGCcaagattgtaataaaacatttttaagaaaaacGTCTTTAGCACTACATATGCGAGTGCATACCGGTGAAAGACCTTACAAATGCGAGATATGTGATAATAGGTTCACACAGTTAGGCGATTTAAAATCCCACATCACATATATTCACCAGAAACAAAAAAGGAACTATAGTTACCAAAGTACTGTAATCACCAGCAGCAACAGTACTGTTGAAGAACAAAAAAATGTTGGACTCGTTTACGTACGCGATAAACCGTTCTCTTGTGATCAGTGCGATTTTAAATGTGCCGATAAATGTGGGGTAAAACGGCATATTGCACGCAAACACTCTACAGAAAAAGCATATTTATGTCACAAATGTAATTACAGCGGTAAAACTAGTTCTTATTTAGCCCAACATTTAAAAAGCCACGAAGCAAAAGACAGATCTAAATATAAACATGCCTGCAAAGATTGCGATAAAAAATTCCGTCACCTACTCCAACTAAATGAGCATCGTACGACTCATACTGGAGAGAAACCTAATACTTGCCCCCAATGTGATCAAAAATTTACTAAAAAGTCTGCTTTGCGTGGTCATATCAGATACATACACGAAAaacaagaaagaaagaaagtgtTCATAAGTAAAGATATGCAATCATTCAATTGCGACAGCTGTGATTTTAAATGTGCCTGTAAAAGGGGTCTAAGCAGACACATATTACGTATGCATGTTAGAGAGAAACTGTTTATGTGTCACAAATGTGATTATAGATGTGTTTTCGAGAGTGATCTGAAAAAACATATAGCTAGACataaagattaa
- Protein Sequence
- MPQITACRACLAENLNMYRVTNSPYKEIYEKLTNAKLGMVYPDTFCYICVSILHKFRKFSTLARNSNAKLQEWYSSETEVSIATFLHCTLVDTLMRKPATQPLFIISTTAVEYVSTLDENRIQEKKDKIQIKMEKIDNTIGEKQTIQFIESTGELYRYESTTRDDSMDIDTAWSDDEPEPKPIVKLESRKLVKTEKTPKGVPVNKKFKRETLLDDHINAITKPQENQPHTKQYSCDICLKAYNTKTSLQRHEMSHNKDKQFNCDHCDKRFNEKAALKRHHLTKHYDKPPLVCQHCFIGAVNKDDLHSHMNNHTLKWKEYICDYCNYKNADKKKLELHIMNKHLRAKRREKIYPCDLCDYKTYKKSWLRRHIDRIHLRQKNYFSEVCGYRAFTESSILKHSIIDNEDKTDQEFKCQDCNKTFLRKTSLALHMRVHTGERPYKCEICDNRFTQLGDLKSHITYIHQKQKRNYSYQSTVITSSNSTVEEQKNVGLVYVRDKPFSCDQCDFKCADKCGVKRHIARKHSTEKAYLCHKCNYSGKTSSYLAQHLKSHEAKDRSKYKHACKDCDKKFRHLLQLNEHRTTHTGEKPNTCPQCDQKFTKKSALRGHIRYIHEKQERKKVFISKDMQSFNCDSCDFKCACKRGLSRHILRMHVREKLFMCHKCDYRCVFESDLKKHIARHKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -