Idim007418.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- ZNF831
- Assembly
- GCA_949358125.1
- Location
- OX442329.1:27549319-27551076[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 8.6 7e+02 1.8 0.1 1 16 49 64 49 66 0.85 2 11 0.093 7.5 7.9 0.1 2 23 183 205 182 205 0.92 3 11 2e-06 0.00016 22.6 0.1 1 23 211 233 211 233 0.98 4 11 1.9e-06 0.00015 22.7 0.9 1 23 243 265 243 265 0.98 5 11 0.00034 0.027 15.6 0.8 1 23 271 293 271 293 0.99 6 11 7.7e-06 0.00062 20.8 0.2 1 23 299 321 299 321 0.97 7 11 4.1e-06 0.00033 21.7 1.2 1 23 327 349 327 349 0.98 8 11 0.00012 0.0097 17.0 0.1 3 23 357 378 355 378 0.96 9 11 6.3e-05 0.0051 17.9 1.7 1 23 408 431 408 431 0.95 10 11 0.21 17 6.8 0.7 1 23 437 462 437 462 0.91 11 11 0.0002 0.016 16.4 3.3 1 23 468 491 468 491 0.97
Sequence Information
- Coding Sequence
- ATGGAGGCCAGAGTCTGTCGTGTTTGTCTTAGTAAGACAGCCACTATTCCTGTGTTCGATGTCCAGGACGGCATCTCATACGGcgaaatgataataaaatgtgTAGCCAACATACACATCGAAAAAGAAGACGGGTTTCCGGACCACATCTGTGACGAATGTGTGCGGGAGCTCGCGACTAGCTACCACTTCGTTCAGAAGTGCGAGGCCTCGGATATCTCGCTACGGAACTGCTCCTTCAGCTCGAAATACCCTGAAGTCTTTCTAGAACTATCCACGCCGTCAATCGACGTTAAAAGTGAACTATATTCCCCCACGAATTCCACACACGAATACAAACCTGACTATGACAACAATACATtcttagaaaatataaaaactgaatTAGATGATATACCAATTTTAAACACtgtaaagaaaaaagtttttaaaaaagaaagtaGATCTAAGTCTAAGAAACGTAAATCTGAGTTGAAATATATTAAGAAGGATGCAATAAATAGTAgttttagaaatttaaataaaaaagtgaaaaCTGGACCCATCCAGTGCACAGAGTTGTGTGGTTTGCAAATGTACGGGCGCTCCGTATTGGAGGCTCACATGAGGACCCATACTGGAGAGAAACCATTCCCATGTCAAGTCTGTGGAAAGACATTTGCCGTGAAAGGAAGTCTTGCCCGACACACTGCTACCCACTCCATTAACAAGCAGTCAGACTATAAATTTGTATGTGAACATTGCGGTAAGAAATTTGCCCGAAGAAATAACATTGTGGTCCACCTACGAGTGCATACTGGAGACAAACCGTACAAGTGTCCATTCTGTCCGATGCAGTTCACACAGATCTCCCCAATGGTGCGTCATAAGCGGAGGCACACTGGGGAGAAACCATTTGTATGTGCCACTTGTGGCCGATCATTCATAGATGCAACACTTTTGAAAAAGCACTATTCAGTTCACAGTGATGAGAAAAACTACCCTTGTCATATCTGCAACAAGACTCTGAAAACCAAAGGCTCTCTGAAGATTCACATAGATTCTCACAATAACACTAAACGCTCCATCTGTAATATATGCGGTCTGGAGTTCACATTGAAGGGCAATTTAGTGATGCATTTGAAAAGAGCACATTCCGAGAAATCTGGATTTTGTACAAGTTGCAACAAGTCATACCCAGATATCGACATTCATTTACGAGTGCATAGAGGAGAAAAGccttttgtttgtaaaatatgtGACCAGGGATATACTACAAAGAATGGGCTAGCGCACCATATGAACTTTAAACACAGAGACAGTGCTAAGTTTAAGTGTACGACGGATGCATGCAACAGGTCTTTCCCGACAATGTCAATGTTGGAGTTCCATGTGTTGAAGCAGCATCTGGACACCTCCCCGTACGTGTGCCATCATTGCGCGCGCTCGTTCCTACGTCCCAGCGACCTCTCCAGACATCTCAAGATTTTCCATCTCGATACACATACACAAGTCAAATCAcagtttataaaaactattaaacttagtgattaa
- Protein Sequence
- MEARVCRVCLSKTATIPVFDVQDGISYGEMIIKCVANIHIEKEDGFPDHICDECVRELATSYHFVQKCEASDISLRNCSFSSKYPEVFLELSTPSIDVKSELYSPTNSTHEYKPDYDNNTFLENIKTELDDIPILNTVKKKVFKKESRSKSKKRKSELKYIKKDAINSSFRNLNKKVKTGPIQCTELCGLQMYGRSVLEAHMRTHTGEKPFPCQVCGKTFAVKGSLARHTATHSINKQSDYKFVCEHCGKKFARRNNIVVHLRVHTGDKPYKCPFCPMQFTQISPMVRHKRRHTGEKPFVCATCGRSFIDATLLKKHYSVHSDEKNYPCHICNKTLKTKGSLKIHIDSHNNTKRSICNICGLEFTLKGNLVMHLKRAHSEKSGFCTSCNKSYPDIDIHLRVHRGEKPFVCKICDQGYTTKNGLAHHMNFKHRDSAKFKCTTDACNRSFPTMSMLEFHVLKQHLDTSPYVCHHCARSFLRPSDLSRHLKIFHLDTHTQVKSQFIKTIKLSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -