Idim001312.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- -
- Assembly
- GCA_949358125.1
- Location
- OX442326.1:20341739-20350156[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0041 0.33 12.2 1.6 3 23 205 226 204 226 0.96 2 23 0.053 4.3 8.7 0.3 1 21 615 635 615 636 0.96 3 23 8.9 7.2e+02 1.7 0.4 3 23 678 699 676 699 0.90 4 23 0.0073 0.59 11.4 3.0 3 22 710 729 710 729 0.96 5 23 0.041 3.3 9.1 0.6 2 23 737 759 736 759 0.95 6 23 0.011 0.85 10.9 0.2 3 23 782 803 780 803 0.96 7 23 0.00032 0.026 15.7 0.8 1 23 809 832 809 832 0.96 8 23 0.11 8.9 7.7 0.0 1 23 857 880 857 880 0.90 9 23 0.00039 0.031 15.4 1.6 1 23 885 907 885 907 0.98 10 23 0.0085 0.69 11.2 0.2 1 23 913 936 913 936 0.95 11 23 0.019 1.5 10.1 3.8 1 23 949 971 949 971 0.97 12 23 0.00015 0.013 16.7 1.8 1 23 1027 1050 1027 1050 0.97 13 23 0.0017 0.13 13.4 1.6 1 23 1112 1135 1112 1135 0.96 14 23 0.0034 0.28 12.5 2.2 2 23 1162 1184 1161 1184 0.95 15 23 0.22 18 6.8 0.1 2 23 1190 1212 1189 1212 0.93 16 23 0.07 5.7 8.3 0.1 1 21 1256 1276 1256 1277 0.94 17 23 0.0011 0.087 14.0 0.6 1 23 1287 1309 1287 1309 0.93 18 23 9.8e-05 0.0079 17.3 0.3 2 23 1398 1420 1398 1420 0.93 19 23 1.6e-07 1.3e-05 26.1 1.1 3 23 1427 1447 1426 1447 0.98 20 23 0.032 2.6 9.4 0.0 3 23 1467 1488 1465 1488 0.95 21 23 0.11 8.5 7.8 0.0 1 23 1509 1531 1509 1531 0.97 22 23 0.037 3 9.2 0.4 1 23 1537 1560 1537 1560 0.95 23 23 0.00022 0.018 16.2 0.4 1 23 1568 1591 1568 1591 0.96
Sequence Information
- Coding Sequence
- atgaatGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAAATACTGCCGATTTTTCCTACCACCAGTTCGGATGAGGCGGAACCTCACGTCCTCGCTACAAAAATCAAGGATTGCGTCTCTGTGCAGATAAACGAAGACGACAATCTACCGACGAATGTCTGCAGGAAATGCATGGACAATGTCAACAACTGGCATGTATTCAAGACTGTGTGTGAAAAGTCGCAAAACAAACTACAGTCTCTGATTGAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATTAAAAGTGAACCTTTGTCTGATGAGATTTATGATGATGGAGTGGTTATTGACGCGTCATACCCTGAAGAGAACTCGCATTCTACAAAGATACAACCGGAAGGTCCCCCGATCTTGGCATCCTTGGGACTTACACCACGAAGCGATAAGGGCATTGAGAGTgaaaaagatgaagaagaagagTTCGAAGAGGAGTCTTTGCCGGTACCCCAACCGGTGAAAGTGCCTGCCATGCCCGAAGTTTCCATCACCGTGATGCGACCAACCGGAGAGACCCTTCATGCACGACAAGGCATCCAGCAAATCGCATCTAAAGACTGTCTCATCTGTGGACGAACGTACAGGTACTCACACAACGCTCGTCGACACGAACTCACATCACACGGCTTCGACCggtatacaaacaaaatatccAAACAGAGATCTGTTCATCATACCCGCAGCCACCACATGCAGCCTAAACTTAGACCTAATCCGTTCAATCCCAAAGCGAGACTCATGCCTAATCCGATTAGCCACAAAATGCAGTTAGTATCCAAAAAAGTTCAACCAAAATTAATACCTCAAAAAATTATTACTCCACCCAAACCGATACCTATTAAAACCCCGAAAGGACATTCAAATAACTTACCATACCCATTACGTATTAAAGCACTCAAGGATttgcaaataaagaaaaaggAACCCCAAATATTGAAAACTTTGTTAACTTCTAAACCGGAAGTTTTAGTATCTGAGCCAGAGATTTTGAATTCTGGGCCGGAAAGCCCTGAGACACTGATATCTGAGCCGGAAATAGCATCTTTCCAAGTGGAAACTATTTTGTCAGAACCTAATGATCATGAGCCTGATGAGGCTGATCCTGAAGTCGATCCGAATCAGGAAATGGAAGATGAAGGTGATATGCAAAATAATCAAACTCAAAATTACGACACTCTTGAGATGGAATCTGATAATGAAATCGAAATAGCAAGGGAACAAGAAAACGAAGGTGAAATTGTAgaaaataatgatgatgacaatGAACACATACTGCCAGACGACTATAATGACGTAGAAGAAGCAGAAATTGACGGAGAAATTGATCGAGACACTGTTGACAGTCAGCAGATGGAAATTGATGATAGCTACCTTAATAAACGAGAGAACAACATTAAAGACGAAGAAGAAGCTAACGAAGAAGGGGAACATGAAGATCATAATCAAAGTCAAGAGGGAGAAGAGACCGAATATGACGAAGTGCCAGTTGTACCTGAAGTAGAAATAAATGAAGAAATGCAAAATAATTCGTACAACAGTGAGGCAAATGAAGAAGAGGAAGAAACTGAAGATAACGGTGACATCAACGATACCGTTGACGATGAAGAAAATAAAGAACTCGATCCTGACAAAACATACGTGACGAGAACTCAACAAGATTTCATTAATAAATTTCGTGACGTCATTCTCCAAATCAATACCAAGAAATGCTTGTGTTGTCAAAAAGAATACCCTCGCCGCAAAGCGGTTATACAGCATTTACAGAAAAACGGTCAAAAAGTACCAAAACATACGTGCTATAACTGCGTAGTTACATTCACCCATATTGGTGCATTGCTTAGTCACATGAGGGCGAACTGTTGCACAGATCTTTGGAAGATCATTTACGACGAAAACGGTATCACTGAAGATATGATCATAGAAGAACCTAAAAGCAAGGTCCAAGCCAAAGATATTTTCAACGCTcgctcctatgggtgtaagttATGTCCAGCTAAATTCCAATTGAAGCAATCGATAATGAAACACGTCTCAGAGTTTCATGAAGATGGACAATCAGCGTCACCACTCGGTTGCGTCCATTGTAGAACTCATTTCAAAGATAAAactttacttaaaaaacatatccGCGTTGGTGAATGCACAGTAAATATCCATTGCAACATTTGCTCTGAACAATTTATAACTACGCAAGAATTTAACGATCACGCTATGACTGTACATGCTGATCACTTTGAGAAAACCGAGAATGACAGTACGAATAAGTGCGTCGATGGTCGCGTCACCGATTGCCCTCTATGTGGAAAGAAAAACAGCAATTATATCAACTTGGTAAAACATTTAAAGATGGCCCACGACGAAGATAGGCCACACTATTGTCAAAATTGCGACGCGAAGTTTGAGCAAGCGGGCGATCTTAACAAACACATTTATACGGAACATTCTCACCAGGCTTTAGGTCAGTCCAATGAACCTGATATGTCCCTAGTAAAGGAGGAAGCGGAAGAGTATCACTACTCATGTACAGAGTGTAATGCTATATTTGAAACAGTTGATGCGTGGACTGATCACCAAGTGGCTGAGCACAATCAAATTGCGCACCAATGTGACCAATGTGATAAAAAATTCTTACGCCCATCAGAACTTGCCgaacataaaaatacacatttaCGAGTAAAATTCTATCCTTGCAGCATTTGTTCTAACTCTTACAGCACTCCCCAAAAATTATCAGATCACGTGCAGCAGGCTCATCCTGGGGCTGGAGTAAATGCGAGTGGGGAGACTGAATTTTTCTGTGTTCATTGTATTCGATCGTTTAAGAGTCGTCAAGCTTTCTCGAACCACATGCGTATACATGCCAAAGTTCCTACAACAAACAGGAAACCTAACACTGCTGAACCAAAAGGATTCGATCCTCGTATTATTGGAAAGCCAATAAAACAGATTAACCTCACTCAACACGTCCAACAACAGCCCGGTTTCGTCAACTTTAAGCCAAATATTAACGTTCCTAATGCTCCTTATTCGTGTGATATTTGCGGGAAAGGCTTCATGCACAAGAAAAATATATGGAAACATAAAAAAGTACTGCATGCCGATATATTAAATGACAGACATGATAGTGAGGAGAATACAATGCAGGCCTCTACTGAAGAGGACGACTTCAATGTTGACGAAAACGGGTCTTTGCTGTCGACACCACAGTTCAACAGCTTTAATTTTACGAACTTTCCTAATAACAcacagcagcagcagcagcaacaAGAGTCTTTGCCTTTCTCTTGCGAATTGTGCTCAAAGAAATTCCCACTCAAGACTAGTTTGTGGAAACACAAGCGAGCCAAACATGGAATTACCAACCCTGGTATTGTAAATGAGACACAAACTTTATCCAATACTCCATCTATTGAAGGTGGGAGTCGCTCCAGTTGTACTATTTGCAAAATAACTTTCCCTGACAAAAAATCCTATTATCGTCATCGAAAAAATTTCCACAAAACTGCAACCCAAATGTGTAAACTCTGTGGGAAACCCTTAAATTCCACTTTAGAACTTTACGAGCATTTGAAAGCGGCTCATGCCAGGGAACTGTTGGGTTATAATGCTAATCAAAGCACGAGCAAAACTCAAGATATATCTCAAGATATGGATGGTGACTACGATAATGATCAAGACGCAGGAGATCCGAGCGTCGACTACCAGGCTAGATATCCATGTGATGCATGCGGAAAACAATTTGTCGGCCTACTTGCTTTACAAAACCATCAATGCGTCAATCAACTAGCTTCACAACCGCAAACATTTGACTGTGAAATCTGCCACAAAAGTTATACTTCTATTGCCGCTTTGAAGAGTCATCGCGGTTGGCATTTACGTTCACCTGACGGCAAAGCGGCGGCTAATAATAGCGGGCTCTGGATGCCACAGCATAAAGTGACGAGCAAAGTGAGCAAGCACGAAGTGGTCGACGCATCGCAGTTAGCTCGAGTACAACACACGACCACTCCCGCCTCGGTTGCGAAAAGAAGACTTCCACCCGAAGTCGAAGTGACCGTCGTCAATCCCAATAAAAAGCTACGTTCAGATGATTCCGTCGACGTGGATCAACAAAACAATGATGCTGTCGAGGGTAGGTATTGCACGATATGCGACAAAGAATTCACGAAACGCGCTGCCTATCAACGTCACATGGACGAAGTACATCAACCCAATTCAGTGTTCTGCCCGGTTTGCGACAAGAGTTTCACGCGCAAATCTACTTTGATCGTCCATATGAAGAAACACTACGAATCGGGCGAAGGTAGTTCTTCGACAGCGGCACCAGATGATGATGCCCTCGCATGTGACGTTTGCGGAGCTCAATTTGACAATGAATTCGCGTTAAGTTCACATCGGGCGACAAGTCACGCCGAGGATTCTGGAGAATCAGATGATGATGGAAACGTTCCTGTCGCACAACCGGGAGAGTTTACATGCGGTCAGTGTGGTGATGGAGTCGCCACTCCTCGGGATCTGATCGCGCATCGCACAATGCACTCTACACCTACGAAATTCTTCTGTAACATATGTTCAGTATACTTTGCTCGAGCTCTGGATCTCTCGTCGCATACACGCGCGCGTCACGCCGACAACGAAAAGGTTTTCTTCCCTTGTGCTATGTGCGACCGGTTTTACATGAACAAGAAGAGTTTACAGCGTCACATCGAGATGGCACATTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGEILPIFPTTSSDEAEPHVLATKIKDCVSVQINEDDNLPTNVCRKCMDNVNNWHVFKTVCEKSQNKLQSLIEKDGSLLEEVKIKSEPLSDEIYDDGVVIDASYPEENSHSTKIQPEGPPILASLGLTPRSDKGIESEKDEEEEFEEESLPVPQPVKVPAMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRTYRYSHNARRHELTSHGFDRYTNKISKQRSVHHTRSHHMQPKLRPNPFNPKARLMPNPISHKMQLVSKKVQPKLIPQKIITPPKPIPIKTPKGHSNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPNDHEPDEADPEVDPNQEMEDEGDMQNNQTQNYDTLEMESDNEIEIAREQENEGEIVENNDDDNEHILPDDYNDVEEAEIDGEIDRDTVDSQQMEIDDSYLNKRENNIKDEEEANEEGEHEDHNQSQEGEETEYDEVPVVPEVEINEEMQNNSYNSEANEEEEETEDNGDINDTVDDEENKELDPDKTYVTRTQQDFINKFRDVILQINTKKCLCCQKEYPRRKAVIQHLQKNGQKVPKHTCYNCVVTFTHIGALLSHMRANCCTDLWKIIYDENGITEDMIIEEPKSKVQAKDIFNARSYGCKLCPAKFQLKQSIMKHVSEFHEDGQSASPLGCVHCRTHFKDKTLLKKHIRVGECTVNIHCNICSEQFITTQEFNDHAMTVHADHFEKTENDSTNKCVDGRVTDCPLCGKKNSNYINLVKHLKMAHDEDRPHYCQNCDAKFEQAGDLNKHIYTEHSHQALGQSNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHQCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQQAHPGAGVNASGETEFFCVHCIRSFKSRQAFSNHMRIHAKVPTTNRKPNTAEPKGFDPRIIGKPIKQINLTQHVQQQPGFVNFKPNINVPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRHDSEENTMQASTEEDDFNVDENGSLLSTPQFNSFNFTNFPNNTQQQQQQQESLPFSCELCSKKFPLKTSLWKHKRAKHGITNPGIVNETQTLSNTPSIEGGSRSSCTICKITFPDKKSYYRHRKNFHKTATQMCKLCGKPLNSTLELYEHLKAAHARELLGYNANQSTSKTQDISQDMDGDYDNDQDAGDPSVDYQARYPCDACGKQFVGLLALQNHQCVNQLASQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLARVQHTTTPASVAKRRLPPEVEVTVVNPNKKLRSDDSVDVDQQNNDAVEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGSSSTAAPDDDALACDVCGAQFDNEFALSSHRATSHAEDSGESDDDGNVPVAQPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICSVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -